Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:10 (5621): wrapper (7.7.26015): starting
21:40:10 (5621): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 21:40:10] Arguments: --nthreads 8
[2026-05-28 21:40:10] Threads: 8
[2026-05-28 21:40:10] Checking for CVMFS
[2026-05-28 21:40:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 21:40:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 21:40:13] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 21:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 21:40:14] 2.11.2.0 28827 62091 107188 159906 2 54 21240646 25165825 1027 130560 0 25040649 99.885 16545517 8000 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 21:40:14] CVMFS is ok
[2026-05-28 21:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 21:40:14] Checking for apptainer binary...
[2026-05-28 21:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 21:40:14] Running /usr/bin/apptainer --version
[2026-05-28 21:40:14] apptainer version 1.3.2-1.el7
[2026-05-28 21:40:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 21:40:21] cg-vwn243.simple-grid.lan
[2026-05-28 21:40:21] apptainer works
[2026-05-28 21:40:21] Set ATHENA_PROC_NUMBER=8
[2026-05-28 21:40:21] Set ATHENA_CORE_NUMBER=8
[2026-05-28 21:40:21] Starting ATLAS job with PandaID=7155877867
[2026-05-28 21:40:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 00:48:07]  *** The last 200 lines of the pilot log: ***
[2026-05-29 00:48:07] 2026-05-28 22:46:57,458 | INFO     | log transfer has been attempted: DONE
[2026-05-29 00:48:07] 2026-05-28 22:46:57,458 | INFO     | job 7155877867 has finished - writing final server update
[2026-05-29 00:48:07] 2026-05-28 22:46:57,459 | INFO     | total number of processed events: 400 (read)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,461 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7155877867/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,462 | INFO     | extracted standard info from prmon json
[2026-05-29 00:48:07] 2026-05-28 22:46:57,462 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 00:48:07] 2026-05-28 22:46:57,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 00:48:07] 2026-05-28 22:46:57,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 00:48:07] 2026-05-28 22:46:57,466 | INFO     | fitting pss+swap vs Time
[2026-05-29 00:48:07] 2026-05-28 22:46:57,467 | INFO     | sum of square deviations: 1577789583.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,468 | INFO     | sum of deviations: 81384273284.5
[2026-05-29 00:48:07] 2026-05-28 22:46:57,468 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,468 | INFO     | mean y: 2418221.6104651163
[2026-05-29 00:48:07] 2026-05-28 22:46:57,468 | INFO     | intersect: 2418221.6104651163
[2026-05-29 00:48:07] 2026-05-28 22:46:57,469 | INFO     | chi2: 7.7066552138873785
[2026-05-29 00:48:07] 2026-05-28 22:46:57,469 | INFO     | sum of square deviations: 1444149868.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,470 | INFO     | sum of deviations: 90263210421.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | mean y: 2428043.4251497006
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | intersect: 2428043.4251497006
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | chi2: 7.019650213544039
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | current chi2=7.019650213544039 (change=8.914437992572418 %)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,471 | INFO     | right removable region: 166
[2026-05-29 00:48:07] 2026-05-28 22:46:57,472 | INFO     | sum of square deviations: 1444149868.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,473 | INFO     | sum of deviations: 22212518284.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,473 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,474 | INFO     | mean y: 2485680.251497006
[2026-05-29 00:48:07] 2026-05-28 22:46:57,474 | INFO     | intersect: 2485680.251497006
[2026-05-29 00:48:07] 2026-05-28 22:46:57,474 | INFO     | chi2: 2.661215176120106
[2026-05-29 00:48:07] 2026-05-28 22:46:57,474 | INFO     | current chi2=2.661215176120106 (change=65.46860989285467 %)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,475 | INFO     | sum of square deviations: 1318277740.5
[2026-05-29 00:48:07] 2026-05-28 22:46:57,476 | INFO     | sum of deviations: -12121003078.5
[2026-05-29 00:48:07] 2026-05-28 22:46:57,479 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,479 | INFO     | mean y: 2527001.3024691357
[2026-05-29 00:48:07] 2026-05-28 22:46:57,479 | INFO     | intersect: 2527001.3024691357
[2026-05-29 00:48:07] 2026-05-28 22:46:57,480 | INFO     | chi2: 0.8779396169801722
[2026-05-29 00:48:07] 2026-05-28 22:46:57,480 | INFO     | current chi2=0.8779396169801722 (change=67.00982224743825 %)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,480 | INFO     | sum of square deviations: 1199940638.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,481 | INFO     | sum of deviations: -14780005431.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | mean y: 2530365.949044586
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | intersect: 2530365.949044586
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | chi2: 0.8520632320727632
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | current chi2=0.8520632320727632 (change=2.9473991612789194 %)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,482 | INFO     | left removable region: 15
[2026-05-29 00:48:07] 2026-05-28 22:46:57,483 | INFO     | sum of square deviations: 1067554900.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,484 | INFO     | sum of deviations: -3947266079.9999986
[2026-05-29 00:48:07] 2026-05-28 22:46:57,484 | INFO     | mean x (centered): 0.0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,484 | INFO     | mean y: 2544873.40397351
[2026-05-29 00:48:07] 2026-05-28 22:46:57,484 | INFO     | intersect: 2544873.40397351
[2026-05-29 00:48:07] 2026-05-28 22:46:57,484 | INFO     | chi2: 0.05517703722002618
[2026-05-29 00:48:07] 2026-05-28 22:46:57,485 | INFO     | current memory leak: -3.70 B/s (using 151 data points, chi2=0.06)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,485 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,511 | INFO     | ..............................
[2026-05-29 00:48:07] 2026-05-28 22:46:57,511 | INFO     | . Timing measurements:
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . get job = 0 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . initial setup = 121 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . payload setup = 213 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . stage-in = 0 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . payload execution = 10583 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . stage-out = 3 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | . log creation = 1 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,512 | INFO     | ..............................
[2026-05-29 00:48:07] 2026-05-28 22:46:57,682 | INFO     | 
[2026-05-29 00:48:07] 2026-05-28 22:46:57,689 | INFO     | job summary report
[2026-05-29 00:48:07] 2026-05-28 22:46:57,689 | INFO     | --------------------------------------------------
[2026-05-29 00:48:07] 2026-05-28 22:46:57,689 | INFO     | PanDA job id: 7155877867
[2026-05-29 00:48:07] 2026-05-28 22:46:57,689 | INFO     | task id: 49545102
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | errors: (none)
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | pilot state: finished 
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | transexitcode: 0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | exeerrorcode: 0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | exeerrordiag: 
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | exitcode: 0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | exitmsg: OK
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | cpuconsumptiontime: 50715 s
[2026-05-29 00:48:07] 2026-05-28 22:46:57,690 | INFO     | nevents: 400
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | neventsw: 0
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | pid: 14051
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | pgrp: 14051
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | corecount: 8
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | event service: False
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | sizes: {0: 2265178, 1: 2265863, 2: 2267692, 13: 2267692, 10801: 2296825, 10804: 2305823, 10807: 2306265}
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | --------------------------------------------------
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | 
[2026-05-29 00:48:07] 2026-05-28 22:46:57,691 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-29 00:48:07] 2026-05-28 22:46:57,768 | INFO     | PID=9597 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-29 00:48:07] 2026-05-28 22:46:57,768 | INFO     | .. there are 2 such processes running
[2026-05-29 00:48:07] 2026-05-28 22:46:58,422 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | job 7155877867 has completed (purged errors)
[2026-05-29 00:48:07] 2026-05-28 22:46:58,424 | INFO     | overall cleanup function is called
[2026-05-29 00:48:07] 2026-05-28 22:46:59,433 | INFO     | --- collectZombieJob: --- 10, [14051]
[2026-05-29 00:48:07] 2026-05-28 22:46:59,433 | INFO     | zombie collector waiting for pid 14051
[2026-05-29 00:48:07] 2026-05-28 22:46:59,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 00:48:07] 2026-05-28 22:46:59,434 | INFO     | collected zombie processes
[2026-05-29 00:48:07] 2026-05-28 22:46:59,434 | INFO     | will attempt to kill all subprocesses of pid=14051
[2026-05-29 00:48:07] 2026-05-28 22:46:59,536 | INFO     | process IDs to be killed: [14051] (in reverse order)
[2026-05-29 00:48:07] 2026-05-28 22:47:00,355 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 00:48:07] 2026-05-28 22:47:00,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 00:48:07] 2026-05-28 22:47:00,358 | INFO     | did not find any defunct processes belonging to 14051
[2026-05-29 00:48:07] 2026-05-28 22:47:00,360 | INFO     | did not find any defunct processes belonging to 14051
[2026-05-29 00:48:07] 2026-05-28 22:47:00,360 | INFO     | Ready for new job
[2026-05-29 00:48:07] 2026-05-28 22:47:00,362 | INFO     | ***************************************
[2026-05-29 00:48:07] 2026-05-28 22:47:00,362 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 00:48:07] 2026-05-28 22:47:00,362 | INFO     | ***************************************
[2026-05-29 00:48:07] 2026-05-28 22:47:00,363 | INFO     | 
[2026-05-29 00:48:07] 2026-05-28 22:47:00,363 | INFO     | pilot is running in a VM
[2026-05-29 00:48:07] 2026-05-28 22:47:00,363 | INFO     | architecture information:
[2026-05-29 00:48:07] 2026-05-28 22:47:00,364 | INFO     | executing command: cat /etc/os-release
[2026-05-29 00:48:07] 2026-05-28 22:47:00,581 | INFO     | cat /etc/os-release:
[2026-05-29 00:48:07] NAME="CentOS Linux"
[2026-05-29 00:48:07] VERSION="7 (Core)"
[2026-05-29 00:48:07] ID="centos"
[2026-05-29 00:48:07] ID_LIKE="rhel fedora"
[2026-05-29 00:48:07] VERSION_ID="7"
[2026-05-29 00:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 00:48:07] ANSI_COLOR="0;31"
[2026-05-29 00:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 00:48:07] HOME_URL="https://www.centos.org/"
[2026-05-29 00:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 00:48:07] 
[2026-05-29 00:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 00:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 00:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 00:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 00:48:07] 
[2026-05-29 00:48:07] 2026-05-28 22:47:00,582 | INFO     | ***************************************
[2026-05-29 00:48:07] 2026-05-28 22:47:01,087 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-29 00:48:07] 2026-05-28 22:47:01,131 | INFO     | sufficient remaining disk space (490787045376 B)
[2026-05-29 00:48:07] 2026-05-28 22:47:01,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 00:48:07] 2026-05-28 22:47:01,132 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 00:48:07] 2026-05-28 22:47:01,132 | INFO     | update_server=False
[2026-05-29 00:48:07] 2026-05-28 22:47:01,132 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 00:48:07] 2026-05-28 22:47:01,568 | INFO     | all payload control threads have been joined
[2026-05-29 00:48:07] 2026-05-28 22:47:01,722 | INFO     | all data control threads have been joined
[2026-05-29 00:48:07] 2026-05-28 22:47:01,770 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 00:48:07] 2026-05-28 22:47:01,770 | INFO     | aborting loop
[2026-05-29 00:48:07] 2026-05-28 22:47:02,063 | INFO     | all job control threads have been joined
[2026-05-29 00:48:07] 2026-05-28 22:47:02,138 | INFO     | [job] retrieve thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,464 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,546 | INFO     | [job] validate thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,574 | INFO     | [payload] control thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 00:48:07] 2026-05-28 22:47:02,617 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 00:48:07] 2026-05-28 22:47:02,732 | INFO     | [data] control thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,776 | INFO     | [job] job monitor thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:02,944 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 00:48:07] 2026-05-28 22:47:03,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,069 | INFO     | [job] control thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,149 | INFO     | [data] copytool_in thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,472 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,480 | INFO     | [payload] validate_post thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,679 | INFO     | [job] queue monitor thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:03,734 | INFO     | [payload] failed_post thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:04,585 | INFO     | [data] copytool_out thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:06,953 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 00:48:07] 2026-05-28 22:47:29,954 | INFO     | PID=9597 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-29 00:48:07] 2026-05-28 22:47:29,955 | INFO     | .. there are 2 such processes running
[2026-05-29 00:48:07] 2026-05-28 22:47:29,955 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 00:48:07] 2026-05-28 22:47:29,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 00:48:07] 2026-05-28 22:47:29,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 00:48:07] 2026-05-28 22:47:54,979 | INFO     | [monitor] cgroup control has ended
[2026-05-29 00:48:07] 2026-05-28 22:47:56,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091619510080)>', '<ExcThread(monitor, started 140090894448384)>']
[2026-05-29 00:48:07] 2026-05-28 22:47:57,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 00:48:07] 2026-05-28 22:47:57,115 | INFO     | [monitor] control thread has ended
[2026-05-29 00:48:07] 2026-05-28 22:48:02,012 | INFO     | all workflow threads have been joined
[2026-05-29 00:48:07] 2026-05-28 22:48:02,012 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 00:48:07] 2026-05-28 22:48:02,013 | INFO     | traces error code: 0
[2026-05-29 00:48:07] 2026-05-28 22:48:02,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 00:48:07] 2026-05-28 22:48:02,232 [wrapper] ==== pilot stdout END ====
[2026-05-29 00:48:07] 2026-05-28 22:48:02,289 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 00:48:07] 2026-05-28 22:48:02,363 [wrapper] pilotpid: 9597
[2026-05-29 00:48:07] 2026-05-28 22:48:02,473 [wrapper] Pilot exit status: 0
[2026-05-29 00:48:07] 2026-05-28 22:48:02,979 [wrapper] pandaids: 7155877867
[2026-05-29 00:48:07] 2026-05-28 22:48:04,134 [wrapper] cleanup supervisor_pilot  3274 9598
[2026-05-29 00:48:07] 2026-05-28 22:48:04,277 [wrapper] Test setup, not cleaning
[2026-05-29 00:48:07] 2026-05-28 22:48:04,383 [wrapper] apfmon messages muted
[2026-05-29 00:48:07] 2026-05-28 22:48:04,483 [wrapper] ==== wrapper stdout END ====
[2026-05-29 00:48:07] 2026-05-28 22:48:04,578 [wrapper] ==== wrapper stderr END ====
[2026-05-29 00:48:07]  *** Error codes and diagnostics ***
[2026-05-29 00:48:07]     "exeErrorCode": 0,
[2026-05-29 00:48:07]     "pilotErrorCode": 0,
[2026-05-29 00:48:07]  *** Listing of results directory ***
[2026-05-29 00:48:07] total 442236
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc    709501 May 28 08:03 pilot3.tar.gz
[2026-05-29 00:48:07] -rwx------. 1 boinc boinc     36281 May 28 08:07 runpilot2-wrapper.sh
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc      5631 May 28 08:08 queuedata.json
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc       100 May 28 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 00:48:07] -rwxr-xr-x. 1 boinc boinc      7986 May 28 21:40 run_atlas
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc       105 May 28 21:40 job.xml
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc 269317079 May 28 21:40 EVNT.49539563._000294.pool.root.1
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc      6306 May 28 21:40 init_data.xml
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc     15667 May 28 21:40 start_atlas.sh
[2026-05-29 00:48:07] drwxrwx--x. 2 boinc boinc        68 May 28 21:40 shared
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc    722753 May 28 21:40 input.tar.gz
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc         0 May 28 21:40 boinc_lockfile
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc      2567 May 28 21:40 pandaJob.out
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc   1251485 May 28 21:44 cric_ddmendpoints.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc       415 May 28 21:46 workernode_map.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc    996105 May 28 21:46 agis_schedconf.cvmfs.json
[2026-05-29 00:48:07] drwx------. 5 boinc boinc      4096 May 28 21:46 pilot3
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc 176863783 May 29 00:45 HITS.49545102._010047.pool.root.1
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc       488 May 29 00:45 boinc_task_state.xml
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc      1025 May 29 00:46 memory_monitor_summary.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc        95 May 29 00:46 pilot_heartbeat.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc         0 May 29 00:46 agis_ddmendpoints.agis.ALL.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc    354746 May 29 00:46 log.49545102._010047.job.log.tgz.1
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc      6395 May 29 00:46 heartbeat_new.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc      6286 May 29 00:46 heartbeat.json
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc      4882 May 29 00:48 pilotlog.txt
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc      8192 May 29 00:48 boinc_mmap_file
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc        28 May 29 00:48 wrapper_checkpoint.txt
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc   1025204 May 29 00:48 log.49545102._010047.job.log.1
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc       357 May 29 00:48 output.list
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc       410 May 29 00:48 runtime_log
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc   1392640 May 29 00:48 result.tar.gz
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc      8439 May 29 00:48 runtime_log.err
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc       655 May 29 00:48 db9f66f23c9f.diag
[2026-05-29 00:48:07] -rw-r--r--. 1 boinc boinc     20689 May 29 00:48 stderr.txt
[2026-05-29 00:48:07] HITS file was successfully produced:
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc 176863783 May 29 00:45 shared/HITS.pool.root.1
[2026-05-29 00:48:07]  *** Contents of shared directory: ***
[2026-05-29 00:48:07] total 437812
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc 269317079 May 28 21:40 ATLAS.root_0
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc     15667 May 28 21:40 start_atlas.sh
[2026-05-29 00:48:07] -rw-r--r--. 2 boinc boinc    722753 May 28 21:40 input.tar.gz
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc 176863783 May 29 00:45 HITS.pool.root.1
[2026-05-29 00:48:07] -rw-------. 1 boinc boinc   1392640 May 29 00:48 result.tar.gz
00:48:09 (5621): run_atlas exited; CPU time 50806.496368
00:48:09 (5621): called boinc_finish(0)

</stderr_txt>
]]>

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