Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:01 (2673340): wrapper (7.7.26015): starting
17:04:01 (2673340): wrapper: running run_atlas (--nthreads 12)
[2026-05-28 17:04:01] Arguments: --nthreads 12
[2026-05-28 17:04:01] Threads: 12
[2026-05-28 17:04:01] Checking for CVMFS
[2026-05-28 17:04:01] No cvmfs_config command found, will try listing directly
[2026-05-28 17:04:01] CVMFS is ok
[2026-05-28 17:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 17:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 17:04:01] Further information can be found at the LHC@home message board.
[2026-05-28 17:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 17:04:01] Checking for apptainer binary...
[2026-05-28 17:04:01] which: no apptainer in ((null))
[2026-05-28 17:04:01] apptainer is not installed, using version from CVMFS
[2026-05-28 17:04:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 17:04:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-28 17:04:01] apptainer works
[2026-05-28 17:04:01] Set ATHENA_PROC_NUMBER=12
[2026-05-28 17:04:01] Set ATHENA_CORE_NUMBER=12
[2026-05-28 17:04:01] Starting ATLAS job with PandaID=7156200883
[2026-05-28 17:04:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 17:39:19]  *** The last 200 lines of the pilot log: ***
[2026-05-28 17:39:19]  filetype=log
[2026-05-28 17:39:19]  guid=66c2425e-c283-4f51-9659-27179ac423af
[2026-05-28 17:39:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-28 17:39:19]  is_altstaged=None
[2026-05-28 17:39:19]  is_tar=False
[2026-05-28 17:39:19]  lfn=log.50447416._000026.job.log.tgz.1
[2026-05-28 17:39:19]  mtime=0
[2026-05-28 17:39:19]  protocol_id=None
[2026-05-28 17:39:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-28 17:39:19]  replicas=None
[2026-05-28 17:39:19]  scope=mc23_13p6TeV
[2026-05-28 17:39:19]  status=None
[2026-05-28 17:39:19]  status_code=0
[2026-05-28 17:39:19]  storage_token=
[2026-05-28 17:39:19]  surl=/var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7156200883/log.50447416._000026.job.log.tgz.1
[2026-05-28 17:39:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/63/log.50447416._000026.job.log.tgz.1
[2026-05-28 17:39:19]  workdir=None
[2026-05-28 17:39:19] ]
[2026-05-28 17:39:19] 2026-05-28 15:38:24,325 | INFO     | transferring file log.50447416._000026.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7156200883/log.50447416._000026.job.log.tgz.1 to /var/lib/
[2026-05-28 17:39:19] 2026-05-28 15:38:24,326 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7156200883/log.50447416._000026.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/30/
[2026-05-28 17:39:19] 2026-05-28 15:38:24,338 | INFO     | adding to output.list: log.50447416._000026.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/63/log.50447416._000026.job.log.tg
[2026-05-28 17:39:19] 2026-05-28 15:38:24,338 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-28 17:39:19] 2026-05-28 15:38:24,338 | INFO     | summary of transferred files:
[2026-05-28 17:39:19] 2026-05-28 15:38:24,338 | INFO     |  -- lfn=log.50447416._000026.job.log.tgz.1, status_code=0, status=transferred
[2026-05-28 17:39:19] 2026-05-28 15:38:24,338 | INFO     | stage-out finished correctly
[2026-05-28 17:39:19] 2026-05-28 15:38:25,740 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 17:39:19] 2026-05-28 15:38:25,994 | INFO     | monitor loop #159: job 0:7156200883 is in state 'finished'
[2026-05-28 17:39:19] 2026-05-28 15:38:25,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 17:39:19] 2026-05-28 15:38:26,923 | INFO     | PID=2677883 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 17:39:19] 2026-05-28 15:38:26,924 | INFO     | .. there are 5 such processes running
[2026-05-28 17:39:19] 2026-05-28 15:38:27,190 | INFO     | job 7156200883 has state=finished
[2026-05-28 17:39:19] 2026-05-28 15:38:27,191 | INFO     | preparing for final server update for job 7156200883 in state='finished'
[2026-05-28 17:39:19] 2026-05-28 15:38:27,749 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,750 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7156200883/jobReport.json
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/30/workernode_map.json
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | this job has now completed (state=finished)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | log transfer has been attempted: DONE
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | job 7156200883 has finished - writing final server update
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1779415/.job.ad'
[2026-05-28 17:39:19] 2026-05-28 15:38:27,751 | INFO     | total number of processed events: 400 (read)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,760 | INFO     | using path: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7156200883/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,760 | INFO     | extracted standard info from prmon json
[2026-05-28 17:39:19] 2026-05-28 15:38:27,760 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 17:39:19] 2026-05-28 15:38:27,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 17:39:19] 2026-05-28 15:38:27,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | fitting pss+swap vs Time
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | sum of square deviations: 6094998.0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | sum of deviations: 353538066.0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | mean x (centered): 0.0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | mean y: 2834934.074074074
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | intersect: 2834934.074074074
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | chi2: 0.0011675484175574249
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | current memory leak: 58.00 B/s (using 27 data points, chi2=0.00)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | could have reported an average CPU frequency of 3673 MHz (5 samples)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | ..............................
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | . Timing measurements:
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | . get job = 0 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,761 | INFO     | . initial setup = 3 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | . payload setup = 4 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | . stage-in = 0 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | . payload execution = 2034 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | . stage-out = 0 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | . log creation = 0 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,762 | INFO     | ..............................
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | 
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | job summary report
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | --------------------------------------------------
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | PanDA job id: 7156200883
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | task id: 50447416
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | errors: (none)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | pilot state: finished 
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | transexitcode: 0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | exeerrorcode: 0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,787 | INFO     | exeerrordiag: 
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | exitcode: 0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | exitmsg: OK
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | cpuconsumptiontime: 22234 s
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | nevents: 400
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | neventsw: 0
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | pid: 2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | pgrp: 2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | corecount: 12
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | event service: False
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | sizes: {0: 2267669, 11: 2267669, 2042: 2292731, 2043: 2301808, 2044: 2301808, 2046: 2302034}
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | --------------------------------------------------
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | 
[2026-05-28 17:39:19] 2026-05-28 15:38:27,788 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/30
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | job 7156200883 has completed (purged errors)
[2026-05-28 17:39:19] 2026-05-28 15:38:27,806 | INFO     | overall cleanup function is called
[2026-05-28 17:39:19] 2026-05-28 15:38:28,812 | INFO     | --- collectZombieJob: --- 10, [2683644]
[2026-05-28 17:39:19] 2026-05-28 15:38:28,813 | INFO     | zombie collector waiting for pid 2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:28,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 17:39:19] 2026-05-28 15:38:28,813 | INFO     | collected zombie processes
[2026-05-28 17:39:19] 2026-05-28 15:38:28,813 | INFO     | will attempt to kill all subprocesses of pid=2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:28,972 | INFO     | process IDs to be killed: [2683644] (in reverse order)
[2026-05-28 17:39:19] 2026-05-28 15:38:29,067 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 17:39:19] 2026-05-28 15:38:29,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 17:39:19] 2026-05-28 15:38:29,081 | INFO     | did not find any defunct processes belonging to 2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:29,092 | INFO     | did not find any defunct processes belonging to 2683644
[2026-05-28 17:39:19] 2026-05-28 15:38:29,092 | INFO     | Ready for new job
[2026-05-28 17:39:19] 2026-05-28 15:38:29,092 | INFO     | ***************************************
[2026-05-28 17:39:19] 2026-05-28 15:38:29,092 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 17:39:19] 2026-05-28 15:38:29,092 | INFO     | ***************************************
[2026-05-28 17:39:19] 2026-05-28 15:38:29,093 | INFO     | 
[2026-05-28 17:39:19] 2026-05-28 15:38:29,096 | INFO     | architecture information:
[2026-05-28 17:39:19] 2026-05-28 15:38:29,096 | INFO     | executing command: cat /etc/os-release
[2026-05-28 17:39:19] 2026-05-28 15:38:29,108 | INFO     | cat /etc/os-release:
[2026-05-28 17:39:19] NAME="CentOS Linux"
[2026-05-28 17:39:19] VERSION="7 (Core)"
[2026-05-28 17:39:19] ID="centos"
[2026-05-28 17:39:19] ID_LIKE="rhel fedora"
[2026-05-28 17:39:19] VERSION_ID="7"
[2026-05-28 17:39:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 17:39:19] ANSI_COLOR="0;31"
[2026-05-28 17:39:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 17:39:19] HOME_URL="https://www.centos.org/"
[2026-05-28 17:39:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 17:39:19] 
[2026-05-28 17:39:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 17:39:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 17:39:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 17:39:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 17:39:19] 
[2026-05-28 17:39:19] 2026-05-28 15:38:29,108 | INFO     | ***************************************
[2026-05-28 17:39:19] 2026-05-28 15:38:29,611 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/30
[2026-05-28 17:39:19] 2026-05-28 15:38:29,625 | INFO     | sufficient remaining disk space (329532833792 B)
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | INFO     | update_server=False
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 17:39:19] 2026-05-28 15:38:29,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 17:39:19] 2026-05-28 15:38:29,627 | INFO     | aborting loop
[2026-05-28 17:39:19] 2026-05-28 15:38:29,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 17:39:19] 2026-05-28 15:38:29,954 | INFO     | all data control threads have been joined
[2026-05-28 17:39:19] 2026-05-28 15:38:30,245 | INFO     | all payload control threads have been joined
[2026-05-28 17:39:19] 2026-05-28 15:38:30,322 | INFO     | all job control threads have been joined
[2026-05-28 17:39:19] 2026-05-28 15:38:30,631 | INFO     | [job] retrieve thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:30,632 | INFO     | [job] queue monitor thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:30,632 | INFO     | [job] job monitor thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:30,902 | INFO     | [payload] failed_post thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:30,960 | INFO     | [data] control thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,251 | INFO     | [payload] control thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,328 | INFO     | [job] control thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,388 | INFO     | [payload] validate_post thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,555 | INFO     | [job] validate thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,625 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,722 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 17:39:19] 2026-05-28 15:38:31,875 | INFO     | [data] copytool_out thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:31,967 | INFO     | [data] copytool_in thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:32,099 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:35,779 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:39,953 | INFO     | job.realtimelogging is not enabled
[2026-05-28 17:39:19] 2026-05-28 15:38:40,959 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 17:39:19] 2026-05-28 15:38:59,248 | INFO     | PID=2677883 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 17:39:19] 2026-05-28 15:38:59,249 | INFO     | .. there are 5 such processes running
[2026-05-28 17:39:19] 2026-05-28 15:38:59,250 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 17:39:19] 2026-05-28 15:38:59,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 17:39:19] 2026-05-28 15:38:59,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 17:39:19] 2026-05-28 15:39:12,469 | INFO     | [monitor] cgroup control has ended
[2026-05-28 17:39:19] 2026-05-28 15:39:14,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23392028350272)>', '<ExcThread(monitor, started 23391715157760)>']
[2026-05-28 17:39:19] 2026-05-28 15:39:15,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 17:39:19] 2026-05-28 15:39:15,325 | INFO     | [monitor] control thread has ended
[2026-05-28 17:39:19] 2026-05-28 15:39:19,355 | INFO     | all workflow threads have been joined
[2026-05-28 17:39:19] 2026-05-28 15:39:19,356 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 17:39:19] 2026-05-28 15:39:19,356 | INFO     | traces error code: 0
[2026-05-28 17:39:19] 2026-05-28 15:39:19,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 17:39:19] 2026-05-28 15:39:19,443 [wrapper] ==== pilot stdout END ====
[2026-05-28 17:39:19] 2026-05-28 15:39:19,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 17:39:19] 2026-05-28 15:39:19,447 [wrapper] pilotpid: 2677883
[2026-05-28 17:39:19] 2026-05-28 15:39:19,449 [wrapper] Pilot exit status: 0
[2026-05-28 17:39:19] 2026-05-28 15:39:19,454 [wrapper] pandaids: 7156200883
[2026-05-28 17:39:19] 2026-05-28 15:39:19,517 [wrapper] cleanup supervisor_pilot 2766050 2677884
[2026-05-28 17:39:19] 2026-05-28 15:39:19,519 [wrapper] Test setup, not cleaning
[2026-05-28 17:39:19] 2026-05-28 15:39:19,520 [wrapper] apfmon messages muted
[2026-05-28 17:39:19] 2026-05-28 15:39:19,521 [wrapper] ==== wrapper stdout END ====
[2026-05-28 17:39:19] 2026-05-28 15:39:19,522 [wrapper] ==== wrapper stderr END ====
[2026-05-28 17:39:19]  *** Error codes and diagnostics ***
[2026-05-28 17:39:19]     "exeErrorCode": 0,
[2026-05-28 17:39:19]     "pilotErrorCode": 0,
[2026-05-28 17:39:19]  *** Listing of results directory ***
[2026-05-28 17:39:19] total 545428
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc    715034 May 21 17:55 pilot3.tar.gz
[2026-05-28 17:39:19] -rwx------. 1 boinc boinc     36281 May 28 13:51 runpilot2-wrapper.sh
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc      5631 May 28 13:52 queuedata.json
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc       100 May 28 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 17:39:19] -rwxr-xr-x. 1 boinc boinc      7986 May 28 17:04 run_atlas
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc       105 May 28 17:04 job.xml
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc     15667 May 28 17:04 start_atlas.sh
[2026-05-28 17:39:19] drwxrwx--x. 2 boinc boinc      4096 May 28 17:04 shared
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc    728939 May 28 17:04 input.tar.gz
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc      6629 May 28 17:04 init_data.xml
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc 285268490 May 28 17:04 EVNT.50447411._000002.pool.root.1
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc         0 May 28 17:04 boinc_lockfile
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc      2587 May 28 17:04 pandaJob.out
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc    996105 May 28 17:04 agis_schedconf.cvmfs.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc         0 May 28 17:04 agis_ddmendpoints.agis.ALL.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc   1251485 May 28 17:04 cric_ddmendpoints.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc       441 May 28 17:04 workernode_map.json
[2026-05-28 17:39:19] drwx------. 5 boinc boinc      4096 May 28 17:04 pilot3
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc       487 May 28 17:38 boinc_task_state.xml
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc 268176767 May 28 17:38 HITS.50447416._000026.pool.root.1
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc      1030 May 28 17:38 memory_monitor_summary.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc    324348 May 28 17:38 log.50447416._000026.job.log.tgz.1
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc      6408 May 28 17:38 heartbeat_new.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc      6299 May 28 17:38 heartbeat.json
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc        95 May 28 17:38 pilot_heartbeat.json
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc        27 May 28 17:39 wrapper_checkpoint.txt
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc      8192 May 28 17:39 boinc_mmap_file
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc      4905 May 28 17:39 pilotlog.txt
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc    244125 May 28 17:39 log.50447416._000026.job.log.1
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc       357 May 28 17:39 output.list
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc       410 May 28 17:39 runtime_log
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc    583680 May 28 17:39 result.tar.gz
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc      8846 May 28 17:39 runtime_log.err
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc       657 May 28 17:39 2c5d3fb2d299.diag
[2026-05-28 17:39:19] -rw-r--r--. 1 boinc boinc     21163 May 28 17:39 stderr.txt
[2026-05-28 17:39:19] HITS file was successfully produced:
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc 268176767 May 28 17:38 shared/HITS.pool.root.1
[2026-05-28 17:39:19]  *** Contents of shared directory: ***
[2026-05-28 17:39:19] total 541784
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc     15667 May 28 17:04 start_atlas.sh
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc    728939 May 28 17:04 input.tar.gz
[2026-05-28 17:39:19] -rw-r--r--. 2 boinc boinc 285268490 May 28 17:04 ATLAS.root_0
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc 268176767 May 28 17:38 HITS.pool.root.1
[2026-05-28 17:39:19] -rw-------. 1 boinc boinc    583680 May 28 17:39 result.tar.gz
17:39:21 (2673340): run_atlas exited; CPU time 22268.085526
17:39:21 (2673340): called boinc_finish(0)

</stderr_txt>
]]>

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