Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:20 (1865797): wrapper (7.7.26015): starting
16:13:20 (1865797): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 16:13:20] Arguments: --nthreads 4
[2026-05-28 16:13:20] Threads: 4
[2026-05-28 16:13:20] Checking for CVMFS
[2026-05-28 16:13:20] No cvmfs_config command found, will try listing directly
[2026-05-28 16:13:20] CVMFS is ok
[2026-05-28 16:13:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 16:13:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 16:13:20] Further information can be found at the LHC@home message board.
[2026-05-28 16:13:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 16:13:20] Checking for apptainer binary...
[2026-05-28 16:13:20] which: no apptainer in ((null))
[2026-05-28 16:13:20] apptainer is not installed, using version from CVMFS
[2026-05-28 16:13:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 16:13:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-28 16:13:21] apptainer works
[2026-05-28 16:13:21] Set ATHENA_PROC_NUMBER=4
[2026-05-28 16:13:21] Set ATHENA_CORE_NUMBER=4
[2026-05-28 16:13:21] Starting ATLAS job with PandaID=7156137613
[2026-05-28 16:13:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 18:36:55]  *** The last 200 lines of the pilot log: ***
[2026-05-28 18:36:55] 2026-05-28 16:36:12,923 | INFO     | PID=1869629 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 18:36:55] 2026-05-28 16:36:12,923 | INFO     | .. there are 6 such processes running
[2026-05-28 18:36:55] 2026-05-28 16:36:13,085 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 18:36:55] 2026-05-28 16:36:13,173 | INFO     | job 7156137613 has state=finished
[2026-05-28 18:36:55] 2026-05-28 16:36:13,174 | INFO     | preparing for final server update for job 7156137613 in state='finished'
[2026-05-28 18:36:55] 2026-05-28 16:36:13,174 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7156137613/jobReport.json
[2026-05-28 18:36:55] 2026-05-28 16:36:13,177 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/1/workernode_map.json
[2026-05-28 18:36:55] 2026-05-28 16:36:13,178 | INFO     | this job has now completed (state=finished)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,178 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,178 | INFO     | log transfer has been attempted: DONE
[2026-05-28 18:36:55] 2026-05-28 16:36:13,178 | INFO     | job 7156137613 has finished - writing final server update
[2026-05-28 18:36:55] 2026-05-28 16:36:13,178 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1219202/.job.ad'
[2026-05-28 18:36:55] 2026-05-28 16:36:13,179 | INFO     | total number of processed events: 400 (read)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,191 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7156137613/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,191 | INFO     | extracted standard info from prmon json
[2026-05-28 18:36:55] 2026-05-28 16:36:13,191 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 18:36:55] 2026-05-28 16:36:13,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 18:36:55] 2026-05-28 16:36:13,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 18:36:55] 2026-05-28 16:36:13,195 | INFO     | fitting pss+swap vs Time
[2026-05-28 18:36:55] 2026-05-28 16:36:13,195 | INFO     | sum of square deviations: 850825255.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,196 | INFO     | sum of deviations: -2244797254.999999
[2026-05-28 18:36:55] 2026-05-28 16:36:13,196 | INFO     | mean x (centered): 0.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,196 | INFO     | mean y: 2391307.557142857
[2026-05-28 18:36:55] 2026-05-28 16:36:13,196 | INFO     | intersect: 2391307.557142857
[2026-05-28 18:36:55] 2026-05-28 16:36:13,196 | INFO     | chi2: 1.3339084220194346
[2026-05-28 18:36:55] 2026-05-28 16:36:13,197 | INFO     | sum of square deviations: 762879420.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,197 | INFO     | sum of deviations: -1472098847.999989
[2026-05-28 18:36:55] 2026-05-28 16:36:13,197 | INFO     | mean x (centered): 0.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,198 | INFO     | mean y: 2392648.014814815
[2026-05-28 18:36:55] 2026-05-28 16:36:13,198 | INFO     | intersect: 2392648.014814815
[2026-05-28 18:36:55] 2026-05-28 16:36:13,198 | INFO     | chi2: 1.335317692132905
[2026-05-28 18:36:55] 2026-05-28 16:36:13,198 | INFO     | current chi2=1.335317692132905 (change=-0.1056496900542053 %)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,199 | INFO     | right removable region: 134
[2026-05-28 18:36:55] 2026-05-28 16:36:13,199 | INFO     | sum of square deviations: 762879420.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | sum of deviations: -19215521916.000004
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | mean x (centered): 0.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | mean y: 2420127.8814814813
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | intersect: 2420127.8814814813
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | chi2: 0.015754090178625144
[2026-05-28 18:36:55] 2026-05-28 16:36:13,200 | INFO     | current chi2=0.015754090178625144 (change=98.81895264183319 %)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,201 | INFO     | sum of square deviations: 681212772.5
[2026-05-28 18:36:55] 2026-05-28 16:36:13,201 | INFO     | sum of deviations: -16803187947.5
[2026-05-28 18:36:55] 2026-05-28 16:36:13,201 | INFO     | mean x (centered): 0.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,201 | INFO     | mean y: 2415583.6384615386
[2026-05-28 18:36:55] 2026-05-28 16:36:13,202 | INFO     | intersect: 2415583.6384615386
[2026-05-28 18:36:55] 2026-05-28 16:36:13,202 | INFO     | chi2: 0.012272391268174145
[2026-05-28 18:36:55] 2026-05-28 16:36:13,202 | INFO     | current chi2=0.012272391268174145 (change=22.100285519343437 %)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,202 | INFO     | left removable region: 10
[2026-05-28 18:36:55] 2026-05-28 16:36:13,202 | INFO     | sum of square deviations: 591173875.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | sum of deviations: -15363107389.5
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | mean x (centered): 0.0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | mean y: 2418512.7983870967
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | intersect: 2418512.7983870967
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | chi2: 0.010871647403098048
[2026-05-28 18:36:55] 2026-05-28 16:36:13,203 | INFO     | current memory leak: -25.99 B/s (using 124 data points, chi2=0.01)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,204 | INFO     | could have reported an average CPU frequency of 2605 MHz (8 samples)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,204 | INFO     | ..............................
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . Timing measurements:
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . get job = 0 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . initial setup = 6 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . payload setup = 10 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . stage-in = 0 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . payload execution = 8526 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . stage-out = 0 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | . log creation = 0 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,205 | INFO     | ..............................
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | 
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | job summary report
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | --------------------------------------------------
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | PanDA job id: 7156137613
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | task id: 49545102
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | errors: (none)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | pilot state: finished 
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | transexitcode: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | exeerrorcode: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | exeerrordiag: 
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | exitcode: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | exitmsg: OK
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | cpuconsumptiontime: 32443 s
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | nevents: 400
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | neventsw: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | pid: 1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | pgrp: 1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | corecount: 4
[2026-05-28 18:36:55] 2026-05-28 16:36:13,666 | INFO     | event service: False
[2026-05-28 18:36:55] 2026-05-28 16:36:13,667 | INFO     | sizes: {0: 2266076, 1: 2267650, 11: 2267678, 8540: 2295544, 8541: 2295543, 8543: 2304619, 8545: 2304997}
[2026-05-28 18:36:55] 2026-05-28 16:36:13,667 | INFO     | --------------------------------------------------
[2026-05-28 18:36:55] 2026-05-28 16:36:13,667 | INFO     | 
[2026-05-28 18:36:55] 2026-05-28 16:36:13,667 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-05-28 18:36:55] 2026-05-28 16:36:13,689 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,689 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | job 7156137613 has completed (purged errors)
[2026-05-28 18:36:55] 2026-05-28 16:36:13,691 | INFO     | overall cleanup function is called
[2026-05-28 18:36:55] 2026-05-28 16:36:14,699 | INFO     | --- collectZombieJob: --- 10, [1874502]
[2026-05-28 18:36:55] 2026-05-28 16:36:14,699 | INFO     | zombie collector waiting for pid 1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:14,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 18:36:55] 2026-05-28 16:36:14,699 | INFO     | collected zombie processes
[2026-05-28 18:36:55] 2026-05-28 16:36:14,700 | INFO     | will attempt to kill all subprocesses of pid=1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:14,960 | INFO     | process IDs to be killed: [1874502] (in reverse order)
[2026-05-28 18:36:55] 2026-05-28 16:36:15,064 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 18:36:55] 2026-05-28 16:36:15,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 18:36:55] 2026-05-28 16:36:15,075 | INFO     | did not find any defunct processes belonging to 1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:15,085 | INFO     | did not find any defunct processes belonging to 1874502
[2026-05-28 18:36:55] 2026-05-28 16:36:15,085 | INFO     | Ready for new job
[2026-05-28 18:36:55] 2026-05-28 16:36:15,088 | INFO     | ***************************************
[2026-05-28 18:36:55] 2026-05-28 16:36:15,088 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 18:36:55] 2026-05-28 16:36:15,088 | INFO     | ***************************************
[2026-05-28 18:36:55] 2026-05-28 16:36:15,088 | INFO     | 
[2026-05-28 18:36:55] 2026-05-28 16:36:15,092 | INFO     | architecture information:
[2026-05-28 18:36:55] 2026-05-28 16:36:15,092 | INFO     | executing command: cat /etc/os-release
[2026-05-28 18:36:55] 2026-05-28 16:36:15,109 | INFO     | cat /etc/os-release:
[2026-05-28 18:36:55] NAME="CentOS Linux"
[2026-05-28 18:36:55] VERSION="7 (Core)"
[2026-05-28 18:36:55] ID="centos"
[2026-05-28 18:36:55] ID_LIKE="rhel fedora"
[2026-05-28 18:36:55] VERSION_ID="7"
[2026-05-28 18:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 18:36:55] ANSI_COLOR="0;31"
[2026-05-28 18:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 18:36:55] HOME_URL="https://www.centos.org/"
[2026-05-28 18:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 18:36:55] 
[2026-05-28 18:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 18:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 18:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 18:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 18:36:55] 
[2026-05-28 18:36:55] 2026-05-28 16:36:15,109 | INFO     | ***************************************
[2026-05-28 18:36:55] 2026-05-28 16:36:15,612 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-05-28 18:36:55] 2026-05-28 16:36:15,629 | INFO     | sufficient remaining disk space (65647149056 B)
[2026-05-28 18:36:55] 2026-05-28 16:36:15,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 18:36:55] 2026-05-28 16:36:15,630 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 18:36:55] 2026-05-28 16:36:15,630 | INFO     | update_server=False
[2026-05-28 18:36:55] 2026-05-28 16:36:15,630 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 18:36:55] 2026-05-28 16:36:15,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 18:36:55] 2026-05-28 16:36:15,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 18:36:55] 2026-05-28 16:36:15,631 | INFO     | aborting loop
[2026-05-28 18:36:55] 2026-05-28 16:36:16,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 18:36:55] 2026-05-28 16:36:16,636 | INFO     | [job] retrieve thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:16,636 | INFO     | [job] job monitor thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:16,664 | INFO     | all data control threads have been joined
[2026-05-28 18:36:55] 2026-05-28 16:36:16,684 | INFO     | all job control threads have been joined
[2026-05-28 18:36:55] 2026-05-28 16:36:16,730 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:16,918 | INFO     | [data] copytool_in thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,080 | INFO     | all payload control threads have been joined
[2026-05-28 18:36:55] 2026-05-28 16:36:17,274 | INFO     | [payload] failed_post thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,669 | INFO     | [job] validate thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,670 | INFO     | [data] control thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,690 | INFO     | [job] control thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,852 | INFO     | [payload] validate_post thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,872 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:17,884 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:18,044 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:18,085 | INFO     | [payload] control thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:18,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 18:36:55] 2026-05-28 16:36:18,390 | INFO     | [data] copytool_out thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:19,317 | INFO     | [job] queue monitor thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:19,637 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 18:36:55] 2026-05-28 16:36:45,401 | INFO     | PID=1869629 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 18:36:55] 2026-05-28 16:36:45,401 | INFO     | .. there are 6 such processes running
[2026-05-28 18:36:55] 2026-05-28 16:36:45,403 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 18:36:55] 2026-05-28 16:36:45,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 18:36:55] 2026-05-28 16:36:45,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 18:36:55] 2026-05-28 16:36:49,302 | INFO     | [monitor] cgroup control has ended
[2026-05-28 18:36:55] 2026-05-28 16:36:50,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22679540504384)>', '<ExcThread(monitor, started 22679309801216)>']
[2026-05-28 18:36:55] 2026-05-28 16:36:50,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 18:36:55] 2026-05-28 16:36:50,427 | INFO     | [monitor] control thread has ended
[2026-05-28 18:36:55] 2026-05-28 16:36:55,399 | INFO     | all workflow threads have been joined
[2026-05-28 18:36:55] 2026-05-28 16:36:55,399 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 18:36:55] 2026-05-28 16:36:55,399 | INFO     | traces error code: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:55,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 18:36:55] 2026-05-28 16:36:55,545 [wrapper] ==== pilot stdout END ====
[2026-05-28 18:36:55] 2026-05-28 16:36:55,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 18:36:55] 2026-05-28 16:36:55,551 [wrapper] pilotpid: 1869629
[2026-05-28 18:36:55] 2026-05-28 16:36:55,554 [wrapper] Pilot exit status: 0
[2026-05-28 18:36:55] 2026-05-28 16:36:55,563 [wrapper] pandaids: 7156137613
[2026-05-28 18:36:55] 2026-05-28 16:36:55,632 [wrapper] cleanup supervisor_pilot 2018617 1869630
[2026-05-28 18:36:55] 2026-05-28 16:36:55,635 [wrapper] Test setup, not cleaning
[2026-05-28 18:36:55] 2026-05-28 16:36:55,638 [wrapper] apfmon messages muted
[2026-05-28 18:36:55] 2026-05-28 16:36:55,640 [wrapper] ==== wrapper stdout END ====
[2026-05-28 18:36:55] 2026-05-28 16:36:55,643 [wrapper] ==== wrapper stderr END ====
[2026-05-28 18:36:55]  *** Error codes and diagnostics ***
[2026-05-28 18:36:55]     "exeErrorCode": 0,
[2026-05-28 18:36:55]     "pilotErrorCode": 0,
[2026-05-28 18:36:55]  *** Listing of results directory ***
[2026-05-28 18:36:55] total 431776
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc    709501 May 28 11:03 pilot3.tar.gz
[2026-05-28 18:36:55] -rwx------. 1 boinc boinc     36281 May 28 11:08 runpilot2-wrapper.sh
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc      5631 May 28 11:08 queuedata.json
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc       100 May 28 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 18:36:55] -rwxr-xr-x. 1 boinc boinc      7986 May 28 16:13 run_atlas
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc       105 May 28 16:13 job.xml
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc 266328621 May 28 16:13 EVNT.49539563._000451.pool.root.1
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc      6482 May 28 16:13 init_data.xml
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc     15667 May 28 16:13 start_atlas.sh
[2026-05-28 18:36:55] drwxrwx--x. 2 boinc boinc      4096 May 28 16:13 shared
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc    722745 May 28 16:13 input.tar.gz
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc         0 May 28 16:13 boinc_lockfile
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc      2568 May 28 16:13 pandaJob.out
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc    996105 May 28 16:13 agis_schedconf.cvmfs.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc         0 May 28 16:13 agis_ddmendpoints.agis.ALL.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc   1251485 May 28 16:13 cric_ddmendpoints.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc       444 May 28 16:13 workernode_map.json
[2026-05-28 18:36:55] drwx------. 5 boinc boinc      4096 May 28 16:13 pilot3
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc 169672231 May 28 18:35 HITS.49545102._013377.pool.root.1
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc       487 May 28 18:35 boinc_task_state.xml
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc      1032 May 28 18:36 memory_monitor_summary.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc    278453 May 28 18:36 log.49545102._013377.job.log.tgz.1
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc      6459 May 28 18:36 heartbeat_new.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc      6350 May 28 18:36 heartbeat.json
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc        27 May 28 18:36 wrapper_checkpoint.txt
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc      8192 May 28 18:36 boinc_mmap_file
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc        95 May 28 18:36 pilot_heartbeat.json
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc      4831 May 28 18:36 pilotlog.txt
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc    827020 May 28 18:36 log.49545102._013377.job.log.1
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc       357 May 28 18:36 output.list
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc       410 May 28 18:36 runtime_log
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc   1126400 May 28 18:36 result.tar.gz
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc      8827 May 28 18:36 runtime_log.err
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc       662 May 28 18:36 05ff27ec23e4.diag
[2026-05-28 18:36:55] -rw-r--r--. 1 boinc boinc     21163 May 28 18:36 stderr.txt
[2026-05-28 18:36:55] HITS file was successfully produced:
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc 169672231 May 28 18:35 shared/HITS.pool.root.1
[2026-05-28 18:36:55]  *** Contents of shared directory: ***
[2026-05-28 18:36:55] total 427616
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc 266328621 May 28 16:13 ATLAS.root_0
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc     15667 May 28 16:13 start_atlas.sh
[2026-05-28 18:36:55] -rw-r--r--. 2 boinc boinc    722745 May 28 16:13 input.tar.gz
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc 169672231 May 28 18:35 HITS.pool.root.1
[2026-05-28 18:36:55] -rw-------. 1 boinc boinc   1126400 May 28 18:36 result.tar.gz
18:36:57 (1865797): run_atlas exited; CPU time 32708.979474
18:36:57 (1865797): called boinc_finish(0)

</stderr_txt>
]]>

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