Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:55:39 (9393): wrapper (7.7.26015): starting
21:55:39 (9393): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 21:55:39] Arguments: --nthreads 8
[2026-05-28 21:55:39] Threads: 8
[2026-05-28 21:55:39] Checking for CVMFS
[2026-05-28 21:55:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 21:55:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 21:55:41] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 21:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 21:55:42] 2.11.2.0 30309 62106 103932 159906 3 55 22078497 25165825 1027 130560 0 26213856 99.897 15140991 12386 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 21:55:42] CVMFS is ok
[2026-05-28 21:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 21:55:42] Checking for apptainer binary...
[2026-05-28 21:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 21:55:42] Running /usr/bin/apptainer --version
[2026-05-28 21:55:43] apptainer version 1.3.2-1.el7
[2026-05-28 21:55:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 21:56:13] cg-vwn233.simple-grid.lan
[2026-05-28 21:56:13] apptainer works
[2026-05-28 21:56:13] Set ATHENA_PROC_NUMBER=8
[2026-05-28 21:56:13] Set ATHENA_CORE_NUMBER=8
[2026-05-28 21:56:13] Starting ATLAS job with PandaID=7156132578
[2026-05-28 21:56:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 01:58:45]  *** The last 200 lines of the pilot log: ***
[2026-05-29 01:58:45] 2026-05-28 23:57:37,210 | INFO     | this job has now completed (state=finished)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,211 | INFO     | log transfer has been attempted: DONE
[2026-05-29 01:58:45] 2026-05-28 23:57:37,211 | INFO     | job 7156132578 has finished - writing final server update
[2026-05-29 01:58:45] 2026-05-28 23:57:37,211 | INFO     | total number of processed events: 400 (read)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,214 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7156132578/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,214 | INFO     | extracted standard info from prmon json
[2026-05-29 01:58:45] 2026-05-28 23:57:37,214 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 01:58:45] 2026-05-28 23:57:37,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 01:58:45] 2026-05-28 23:57:37,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 01:58:45] 2026-05-28 23:57:37,220 | INFO     | fitting pss+swap vs Time
[2026-05-29 01:58:45] 2026-05-28 23:57:37,221 | INFO     | sum of square deviations: 3579276412.5
[2026-05-29 01:58:45] 2026-05-28 23:57:37,223 | INFO     | sum of deviations: 121622980624.49997
[2026-05-29 01:58:45] 2026-05-28 23:57:37,223 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,223 | INFO     | mean y: 2430103.075221239
[2026-05-29 01:58:45] 2026-05-28 23:57:37,223 | INFO     | intersect: 2430103.075221239
[2026-05-29 01:58:45] 2026-05-28 23:57:37,224 | INFO     | chi2: 9.336505014391994
[2026-05-29 01:58:45] 2026-05-28 23:57:37,224 | INFO     | sum of square deviations: 3346927870.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,226 | INFO     | sum of deviations: 133865000139.00002
[2026-05-29 01:58:45] 2026-05-28 23:57:37,226 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,227 | INFO     | mean y: 2437959.7194570135
[2026-05-29 01:58:45] 2026-05-28 23:57:37,227 | INFO     | intersect: 2437959.7194570135
[2026-05-29 01:58:45] 2026-05-28 23:57:37,227 | INFO     | chi2: 8.652594523510002
[2026-05-29 01:58:45] 2026-05-28 23:57:37,227 | INFO     | current chi2=8.652594523510002 (change=7.325123157195981 %)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,227 | INFO     | right removable region: 220
[2026-05-29 01:58:45] 2026-05-28 23:57:37,228 | INFO     | sum of square deviations: 3346927870.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,234 | INFO     | sum of deviations: 42519531683.00001
[2026-05-29 01:58:45] 2026-05-28 23:57:37,234 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,234 | INFO     | mean y: 2481990.882352941
[2026-05-29 01:58:45] 2026-05-28 23:57:37,234 | INFO     | intersect: 2481990.882352941
[2026-05-29 01:58:45] 2026-05-28 23:57:37,235 | INFO     | chi2: 4.103658817964004
[2026-05-29 01:58:45] 2026-05-28 23:57:37,235 | INFO     | current chi2=4.103658817964004 (change=56.0471631339745 %)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,235 | INFO     | sum of square deviations: 3124858590.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,237 | INFO     | sum of deviations: -20874421582.5
[2026-05-29 01:58:45] 2026-05-28 23:57:37,238 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,238 | INFO     | mean y: 2525482.9305555555
[2026-05-29 01:58:45] 2026-05-28 23:57:37,238 | INFO     | intersect: 2525482.9305555555
[2026-05-29 01:58:45] 2026-05-28 23:57:37,238 | INFO     | chi2: 1.0351359119001038
[2026-05-29 01:58:45] 2026-05-28 23:57:37,239 | INFO     | current chi2=1.0351359119001038 (change=74.77529302950975 %)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,239 | INFO     | sum of square deviations: 2912836010.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,241 | INFO     | sum of deviations: -34002834415.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,241 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,241 | INFO     | mean y: 2534874.4265402844
[2026-05-29 01:58:45] 2026-05-28 23:57:37,242 | INFO     | intersect: 2534874.4265402844
[2026-05-29 01:58:45] 2026-05-28 23:57:37,242 | INFO     | chi2: 0.8632425414605721
[2026-05-29 01:58:45] 2026-05-28 23:57:37,242 | INFO     | current chi2=0.8632425414605721 (change=16.60587450048012 %)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,242 | INFO     | left removable region: 15
[2026-05-29 01:58:45] 2026-05-28 23:57:37,243 | INFO     | sum of square deviations: 2671343110.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,245 | INFO     | sum of deviations: -19092626313.999992
[2026-05-29 01:58:45] 2026-05-28 23:57:37,245 | INFO     | mean x (centered): 0.0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,245 | INFO     | mean y: 2545917.0146341464
[2026-05-29 01:58:45] 2026-05-28 23:57:37,245 | INFO     | intersect: 2545917.0146341464
[2026-05-29 01:58:45] 2026-05-28 23:57:37,246 | INFO     | chi2: 0.0686102633413767
[2026-05-29 01:58:45] 2026-05-28 23:57:37,246 | INFO     | current memory leak: -7.15 B/s (using 205 data points, chi2=0.07)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,246 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | ..............................
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . Timing measurements:
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . get job = 0 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . initial setup = 109 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . payload setup = 201 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . stage-in = 0 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,277 | INFO     | . payload execution = 13895 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,278 | INFO     | . stage-out = 3 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,278 | INFO     | . log creation = 1 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,278 | INFO     | ..............................
[2026-05-29 01:58:45] 2026-05-28 23:57:37,452 | INFO     | 
[2026-05-29 01:58:45] 2026-05-28 23:57:37,452 | INFO     | job summary report
[2026-05-29 01:58:45] 2026-05-28 23:57:37,452 | INFO     | --------------------------------------------------
[2026-05-29 01:58:45] 2026-05-28 23:57:37,452 | INFO     | PanDA job id: 7156132578
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | task id: 49545102
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | errors: (none)
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | pilot state: finished 
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | transexitcode: 0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | exeerrorcode: 0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | exeerrordiag: 
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | exitcode: 0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | exitmsg: OK
[2026-05-29 01:58:45] 2026-05-28 23:57:37,453 | INFO     | cpuconsumptiontime: 51569 s
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | nevents: 400
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | neventsw: 0
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | pid: 17871
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | pgrp: 17871
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | corecount: 8
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | event service: False
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | sizes: {0: 2265182, 1: 2266094, 2: 2267696, 13: 2267696, 14101: 2298179, 14105: 2307177, 14107: 2307361, 14110: 2307555}
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | --------------------------------------------------
[2026-05-29 01:58:45] 2026-05-28 23:57:37,454 | INFO     | 
[2026-05-29 01:58:45] 2026-05-28 23:57:37,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-29 01:58:45] 2026-05-28 23:57:38,130 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,132 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 01:58:45] 2026-05-28 23:57:38,133 | INFO     | job 7156132578 has completed (purged errors)
[2026-05-29 01:58:45] 2026-05-28 23:57:38,133 | INFO     | overall cleanup function is called
[2026-05-29 01:58:45] 2026-05-28 23:57:39,141 | INFO     | --- collectZombieJob: --- 10, [17871]
[2026-05-29 01:58:45] 2026-05-28 23:57:39,142 | INFO     | zombie collector waiting for pid 17871
[2026-05-29 01:58:45] 2026-05-28 23:57:39,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 01:58:45] 2026-05-28 23:57:39,142 | INFO     | collected zombie processes
[2026-05-29 01:58:45] 2026-05-28 23:57:39,142 | INFO     | will attempt to kill all subprocesses of pid=17871
[2026-05-29 01:58:45] 2026-05-28 23:57:39,214 | INFO     | process IDs to be killed: [17871] (in reverse order)
[2026-05-29 01:58:45] 2026-05-28 23:57:40,088 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 01:58:45] 2026-05-28 23:57:40,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 01:58:45] 2026-05-28 23:57:40,091 | INFO     | did not find any defunct processes belonging to 17871
[2026-05-29 01:58:45] 2026-05-28 23:57:40,092 | INFO     | did not find any defunct processes belonging to 17871
[2026-05-29 01:58:45] 2026-05-28 23:57:40,093 | INFO     | Ready for new job
[2026-05-29 01:58:45] 2026-05-28 23:57:40,100 | INFO     | ***************************************
[2026-05-29 01:58:45] 2026-05-28 23:57:40,100 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 01:58:45] 2026-05-28 23:57:40,100 | INFO     | ***************************************
[2026-05-29 01:58:45] 2026-05-28 23:57:40,100 | INFO     | 
[2026-05-29 01:58:45] 2026-05-28 23:57:40,101 | INFO     | pilot is running in a VM
[2026-05-29 01:58:45] 2026-05-28 23:57:40,101 | INFO     | architecture information:
[2026-05-29 01:58:45] 2026-05-28 23:57:40,114 | INFO     | executing command: cat /etc/os-release
[2026-05-29 01:58:45] 2026-05-28 23:57:40,325 | INFO     | cat /etc/os-release:
[2026-05-29 01:58:45] NAME="CentOS Linux"
[2026-05-29 01:58:45] VERSION="7 (Core)"
[2026-05-29 01:58:45] ID="centos"
[2026-05-29 01:58:45] ID_LIKE="rhel fedora"
[2026-05-29 01:58:45] VERSION_ID="7"
[2026-05-29 01:58:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 01:58:45] ANSI_COLOR="0;31"
[2026-05-29 01:58:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 01:58:45] HOME_URL="https://www.centos.org/"
[2026-05-29 01:58:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 01:58:45] 
[2026-05-29 01:58:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 01:58:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 01:58:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 01:58:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 01:58:45] 
[2026-05-29 01:58:45] 2026-05-28 23:57:40,325 | INFO     | ***************************************
[2026-05-29 01:58:45] 2026-05-28 23:57:40,829 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-29 01:58:45] 2026-05-28 23:57:41,046 | INFO     | sufficient remaining disk space (495886270464 B)
[2026-05-29 01:58:45] 2026-05-28 23:57:41,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 01:58:45] 2026-05-28 23:57:41,047 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 01:58:45] 2026-05-28 23:57:41,047 | INFO     | update_server=False
[2026-05-29 01:58:45] 2026-05-28 23:57:41,047 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 01:58:45] 2026-05-28 23:57:41,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 01:58:45] 2026-05-28 23:57:41,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 01:58:45] 2026-05-28 23:57:41,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 01:58:45] 2026-05-28 23:57:41,267 | INFO     | aborting loop
[2026-05-29 01:58:45] 2026-05-28 23:57:41,511 | INFO     | all job control threads have been joined
[2026-05-29 01:58:45] 2026-05-28 23:57:41,859 | INFO     | all data control threads have been joined
[2026-05-29 01:58:45] 2026-05-28 23:57:42,053 | INFO     | [job] retrieve thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,083 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,106 | INFO     | [payload] failed_post thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,164 | INFO     | all payload control threads have been joined
[2026-05-29 01:58:45] 2026-05-28 23:57:42,273 | INFO     | [job] job monitor thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 01:58:45] 2026-05-28 23:57:42,517 | INFO     | [job] control thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,535 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,569 | INFO     | [payload] validate_post thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,865 | INFO     | [data] control thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:42,957 | INFO     | [job] validate thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,054 | INFO     | [data] copytool_out thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,170 | INFO     | [payload] control thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,171 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,194 | INFO     | [data] copytool_in thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,472 | INFO     | [job] queue monitor thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:43,549 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:57:45,062 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 01:58:45] 2026-05-28 23:58:09,625 | INFO     | PID=13390 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-29 01:58:45] 2026-05-28 23:58:09,625 | INFO     | .. there are 2 such processes running
[2026-05-29 01:58:45] 2026-05-28 23:58:09,628 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 01:58:45] 2026-05-28 23:58:09,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 01:58:45] 2026-05-28 23:58:09,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 01:58:45] 2026-05-28 23:58:37,441 | INFO     | [monitor] cgroup control has ended
[2026-05-29 01:58:45] 2026-05-28 23:58:38,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029321221952)>', '<ExcThread(monitor, started 140029029644032)>']
[2026-05-29 01:58:45] 2026-05-28 23:58:38,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 01:58:45] 2026-05-28 23:58:38,802 | INFO     | [monitor] control thread has ended
[2026-05-29 01:58:45] 2026-05-28 23:58:43,703 | INFO     | all workflow threads have been joined
[2026-05-29 01:58:45] 2026-05-28 23:58:43,704 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 01:58:45] 2026-05-28 23:58:43,704 | INFO     | traces error code: 0
[2026-05-29 01:58:45] 2026-05-28 23:58:43,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 01:58:45] 2026-05-28 23:58:44,081 [wrapper] ==== pilot stdout END ====
[2026-05-29 01:58:45] 2026-05-28 23:58:44,142 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 01:58:45] 2026-05-28 23:58:44,151 [wrapper] pilotpid: 13390
[2026-05-29 01:58:45] 2026-05-28 23:58:44,153 [wrapper] Pilot exit status: 0
[2026-05-29 01:58:45] 2026-05-28 23:58:44,176 [wrapper] pandaids: 7156132578
[2026-05-29 01:58:45] 2026-05-28 23:58:44,205 [wrapper] cleanup supervisor_pilot 24742 13391
[2026-05-29 01:58:45] 2026-05-28 23:58:44,223 [wrapper] Test setup, not cleaning
[2026-05-29 01:58:45] 2026-05-28 23:58:44,233 [wrapper] apfmon messages muted
[2026-05-29 01:58:45] 2026-05-28 23:58:44,243 [wrapper] ==== wrapper stdout END ====
[2026-05-29 01:58:45] 2026-05-28 23:58:44,255 [wrapper] ==== wrapper stderr END ====
[2026-05-29 01:58:45]  *** Error codes and diagnostics ***
[2026-05-29 01:58:45]     "exeErrorCode": 0,
[2026-05-29 01:58:45]     "pilotErrorCode": 0,
[2026-05-29 01:58:45]  *** Listing of results directory ***
[2026-05-29 01:58:45] total 444056
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc    709501 May 28 11:03 pilot3.tar.gz
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc      5631 May 28 11:06 queuedata.json
[2026-05-29 01:58:45] -rwx------. 1 boinc boinc     36281 May 28 11:07 runpilot2-wrapper.sh
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc       100 May 28 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 01:58:45] -rwxr-xr-x. 1 boinc boinc      7986 May 28 21:55 run_atlas
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc       105 May 28 21:55 job.xml
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc      6306 May 28 21:55 init_data.xml
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc 263348356 May 28 21:55 EVNT.49539563._000415.pool.root.1
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc     15667 May 28 21:55 start_atlas.sh
[2026-05-29 01:58:45] drwxrwx--x. 2 boinc boinc        68 May 28 21:55 shared
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc    722750 May 28 21:55 input.tar.gz
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc         0 May 28 21:55 boinc_lockfile
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc      2569 May 28 21:56 pandaJob.out
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc   1251485 May 28 22:00 cric_ddmendpoints.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc       415 May 28 22:02 workernode_map.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc    996105 May 28 22:02 agis_schedconf.cvmfs.json
[2026-05-29 01:58:45] drwx------. 5 boinc boinc      4096 May 28 22:02 pilot3
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc 184043515 May 29 01:55 HITS.49545102._012528.pool.root.1
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc       488 May 29 01:56 boinc_task_state.xml
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc      1016 May 29 01:57 memory_monitor_summary.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc         0 May 29 01:57 agis_ddmendpoints.agis.ALL.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc    388571 May 29 01:57 log.49545102._012528.job.log.tgz.1
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc      6386 May 29 01:57 heartbeat_new.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc      6277 May 29 01:57 heartbeat.json
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc        95 May 29 01:58 pilot_heartbeat.json
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc      8192 May 29 01:58 boinc_mmap_file
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc        28 May 29 01:58 wrapper_checkpoint.txt
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc      4883 May 29 01:58 pilotlog.txt
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc   1316569 May 29 01:58 log.49545102._012528.job.log.1
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc       357 May 29 01:58 output.list
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc       410 May 29 01:58 runtime_log
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc   1720320 May 29 01:58 result.tar.gz
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc      8439 May 29 01:58 runtime_log.err
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc       656 May 29 01:58 05eda880d512.diag
[2026-05-29 01:58:45] -rw-r--r--. 1 boinc boinc     20642 May 29 01:58 stderr.txt
[2026-05-29 01:58:45] HITS file was successfully produced:
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc 184043515 May 29 01:55 shared/HITS.pool.root.1
[2026-05-29 01:58:45]  *** Contents of shared directory: ***
[2026-05-29 01:58:45] total 439316
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc 263348356 May 28 21:55 ATLAS.root_0
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc     15667 May 28 21:55 start_atlas.sh
[2026-05-29 01:58:45] -rw-r--r--. 2 boinc boinc    722750 May 28 21:55 input.tar.gz
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc 184043515 May 29 01:55 HITS.pool.root.1
[2026-05-29 01:58:45] -rw-------. 1 boinc boinc   1720320 May 29 01:58 result.tar.gz
01:58:47 (9393): run_atlas exited; CPU time 51702.755637
01:58:47 (9393): called boinc_finish(0)

</stderr_txt>
]]>

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