Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:47 (347): wrapper (7.7.26015): starting
18:33:47 (347): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 18:33:47] Arguments: --nthreads 8
[2026-05-28 18:33:47] Threads: 8
[2026-05-28 18:33:47] Checking for CVMFS
[2026-05-28 18:33:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 18:33:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 18:33:49] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 18:33:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 18:33:50] 2.11.2.0 29547 61907 103484 159903 2 55 18505579 25165825 1027 130560 0 29574575 99.940 13331385 6662 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 18:33:50] CVMFS is ok
[2026-05-28 18:33:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 18:33:50] Checking for apptainer binary...
[2026-05-28 18:33:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 18:33:50] Running /usr/bin/apptainer --version
[2026-05-28 18:33:51] apptainer version 1.3.2-1.el7
[2026-05-28 18:33:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 18:34:10] cg-vwn274.simple-grid.lan
[2026-05-28 18:34:10] apptainer works
[2026-05-28 18:34:10] Set ATHENA_PROC_NUMBER=8
[2026-05-28 18:34:10] Set ATHENA_CORE_NUMBER=8
[2026-05-28 18:34:10] Starting ATLAS job with PandaID=7155538201
[2026-05-28 18:34:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 22:32:54]  *** The last 200 lines of the pilot log: ***
[2026-05-28 22:32:54] 2026-05-28 20:31:52,778 | INFO     | this job has now completed (state=finished)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,778 | INFO     | log transfer has been attempted: DONE
[2026-05-28 22:32:54] 2026-05-28 20:31:52,778 | INFO     | job 7155538201 has finished - writing final server update
[2026-05-28 22:32:54] 2026-05-28 20:31:52,778 | INFO     | total number of processed events: 400 (read)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,780 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7155538201/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,781 | INFO     | extracted standard info from prmon json
[2026-05-28 22:32:54] 2026-05-28 20:31:52,781 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 22:32:54] 2026-05-28 20:31:52,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 22:32:54] 2026-05-28 20:31:52,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 22:32:54] 2026-05-28 20:31:52,785 | INFO     | fitting pss+swap vs Time
[2026-05-28 22:32:54] 2026-05-28 20:31:52,786 | INFO     | sum of square deviations: 3438620752.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,788 | INFO     | sum of deviations: 98352496549.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,788 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,788 | INFO     | mean y: 2421340.609865471
[2026-05-28 22:32:54] 2026-05-28 20:31:52,788 | INFO     | intersect: 2421340.609865471
[2026-05-28 22:32:54] 2026-05-28 20:31:52,788 | INFO     | chi2: 9.431598867882805
[2026-05-28 22:32:54] 2026-05-28 20:31:52,789 | INFO     | sum of square deviations: 3212467674.5
[2026-05-28 22:32:54] 2026-05-28 20:31:52,790 | INFO     | sum of deviations: 126335562007.00002
[2026-05-28 22:32:54] 2026-05-28 20:31:52,790 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,791 | INFO     | mean y: 2439930.642201835
[2026-05-28 22:32:54] 2026-05-28 20:31:52,791 | INFO     | intersect: 2439930.642201835
[2026-05-28 22:32:54] 2026-05-28 20:31:52,791 | INFO     | chi2: 7.919197252338609
[2026-05-28 22:32:54] 2026-05-28 20:31:52,791 | INFO     | current chi2=7.919197252338609 (change=16.035474331869015 %)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,791 | INFO     | right removable region: 217
[2026-05-28 22:32:54] 2026-05-28 20:31:52,792 | INFO     | sum of square deviations: 3212467674.5
[2026-05-28 22:32:54] 2026-05-28 20:31:52,793 | INFO     | sum of deviations: 19556989912.000008
[2026-05-28 22:32:54] 2026-05-28 20:31:52,793 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,793 | INFO     | mean y: 2474448.4587155962
[2026-05-28 22:32:54] 2026-05-28 20:31:52,794 | INFO     | intersect: 2474448.4587155962
[2026-05-28 22:32:54] 2026-05-28 20:31:52,794 | INFO     | chi2: 4.215812606443981
[2026-05-28 22:32:54] 2026-05-28 20:31:52,794 | INFO     | current chi2=4.215812606443981 (change=55.3011884252204 %)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,794 | INFO     | sum of square deviations: 2996454322.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,796 | INFO     | sum of deviations: -33982516962.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,796 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,796 | INFO     | mean y: 2512128.276995305
[2026-05-28 22:32:54] 2026-05-28 20:31:52,796 | INFO     | intersect: 2512128.276995305
[2026-05-28 22:32:54] 2026-05-28 20:31:52,801 | INFO     | chi2: 1.867947096991688
[2026-05-28 22:32:54] 2026-05-28 20:31:52,801 | INFO     | current chi2=1.867947096991688 (change=55.69188502030471 %)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,802 | INFO     | sum of square deviations: 2790348132.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,803 | INFO     | sum of deviations: -40605778927.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,803 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,803 | INFO     | mean y: 2516986.5096153845
[2026-05-28 22:32:54] 2026-05-28 20:31:52,803 | INFO     | intersect: 2516986.5096153845
[2026-05-28 22:32:54] 2026-05-28 20:31:52,804 | INFO     | chi2: 1.8052833445679384
[2026-05-28 22:32:54] 2026-05-28 20:31:52,804 | INFO     | current chi2=1.8052833445679384 (change=3.3546856077813483 %)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,804 | INFO     | left removable region: 15
[2026-05-28 22:32:54] 2026-05-28 20:31:52,804 | INFO     | sum of square deviations: 2555770710.5
[2026-05-28 22:32:54] 2026-05-28 20:31:52,806 | INFO     | sum of deviations: -11424705585.500004
[2026-05-28 22:32:54] 2026-05-28 20:31:52,806 | INFO     | mean x (centered): 0.0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,806 | INFO     | mean y: 2539320.5495049506
[2026-05-28 22:32:54] 2026-05-28 20:31:52,806 | INFO     | intersect: 2539320.5495049506
[2026-05-28 22:32:54] 2026-05-28 20:31:52,807 | INFO     | chi2: 0.09067854227866773
[2026-05-28 22:32:54] 2026-05-28 20:31:52,807 | INFO     | current memory leak: -4.47 B/s (using 202 data points, chi2=0.09)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,808 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | ..............................
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . Timing measurements:
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . get job = 0 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . initial setup = 118 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . payload setup = 192 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . stage-in = 0 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,816 | INFO     | . payload execution = 13674 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,817 | INFO     | . stage-out = 3 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,817 | INFO     | . log creation = 1 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,817 | INFO     | ..............................
[2026-05-28 22:32:54] 2026-05-28 20:31:52,977 | INFO     | 
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | job summary report
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | --------------------------------------------------
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | PanDA job id: 7155538201
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | task id: 49545102
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | errors: (none)
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | pilot state: finished 
[2026-05-28 22:32:54] 2026-05-28 20:31:52,978 | INFO     | transexitcode: 0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | exeerrorcode: 0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | exeerrordiag: 
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | exitcode: 0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | exitmsg: OK
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | cpuconsumptiontime: 50970 s
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | nevents: 400
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | neventsw: 0
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | pid: 8849
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | pgrp: 8849
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | corecount: 8
[2026-05-28 22:32:54] 2026-05-28 20:31:52,979 | INFO     | event service: False
[2026-05-28 22:32:54] 2026-05-28 20:31:52,980 | INFO     | sizes: {0: 2265177, 1: 2265862, 2: 2267691, 13: 2267691, 13871: 2298055, 13876: 2307053, 13879: 2307237, 13880: 2307431}
[2026-05-28 22:32:54] 2026-05-28 20:31:52,980 | INFO     | --------------------------------------------------
[2026-05-28 22:32:54] 2026-05-28 20:31:52,980 | INFO     | 
[2026-05-28 22:32:54] 2026-05-28 20:31:52,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-28 22:32:54] 2026-05-28 20:31:53,575 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,575 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,575 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,575 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | job 7155538201 has completed (purged errors)
[2026-05-28 22:32:54] 2026-05-28 20:31:53,577 | INFO     | overall cleanup function is called
[2026-05-28 22:32:54] 2026-05-28 20:31:54,585 | INFO     | --- collectZombieJob: --- 10, [8849]
[2026-05-28 22:32:54] 2026-05-28 20:31:54,586 | INFO     | zombie collector waiting for pid 8849
[2026-05-28 22:32:54] 2026-05-28 20:31:54,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 22:32:54] 2026-05-28 20:31:54,586 | INFO     | collected zombie processes
[2026-05-28 22:32:54] 2026-05-28 20:31:54,586 | INFO     | will attempt to kill all subprocesses of pid=8849
[2026-05-28 22:32:54] 2026-05-28 20:31:54,651 | INFO     | process IDs to be killed: [8849] (in reverse order)
[2026-05-28 22:32:54] 2026-05-28 20:31:55,589 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 22:32:54] 2026-05-28 20:31:55,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 22:32:54] 2026-05-28 20:31:55,592 | INFO     | did not find any defunct processes belonging to 8849
[2026-05-28 22:32:54] 2026-05-28 20:31:55,594 | INFO     | did not find any defunct processes belonging to 8849
[2026-05-28 22:32:54] 2026-05-28 20:31:55,594 | INFO     | Ready for new job
[2026-05-28 22:32:54] 2026-05-28 20:31:55,596 | INFO     | ***************************************
[2026-05-28 22:32:54] 2026-05-28 20:31:55,596 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 22:32:54] 2026-05-28 20:31:55,597 | INFO     | ***************************************
[2026-05-28 22:32:54] 2026-05-28 20:31:55,597 | INFO     | 
[2026-05-28 22:32:54] 2026-05-28 20:31:55,597 | INFO     | pilot is running in a VM
[2026-05-28 22:32:54] 2026-05-28 20:31:55,597 | INFO     | architecture information:
[2026-05-28 22:32:54] 2026-05-28 20:31:55,605 | INFO     | executing command: cat /etc/os-release
[2026-05-28 22:32:54] 2026-05-28 20:31:55,925 | INFO     | cat /etc/os-release:
[2026-05-28 22:32:54] NAME="CentOS Linux"
[2026-05-28 22:32:54] VERSION="7 (Core)"
[2026-05-28 22:32:54] ID="centos"
[2026-05-28 22:32:54] ID_LIKE="rhel fedora"
[2026-05-28 22:32:54] VERSION_ID="7"
[2026-05-28 22:32:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 22:32:54] ANSI_COLOR="0;31"
[2026-05-28 22:32:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 22:32:54] HOME_URL="https://www.centos.org/"
[2026-05-28 22:32:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 22:32:54] 
[2026-05-28 22:32:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 22:32:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 22:32:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 22:32:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 22:32:54] 
[2026-05-28 22:32:54] 2026-05-28 20:31:55,925 | INFO     | ***************************************
[2026-05-28 22:32:54] 2026-05-28 20:31:56,429 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-28 22:32:54] 2026-05-28 20:31:56,654 | INFO     | sufficient remaining disk space (496684236800 B)
[2026-05-28 22:32:54] 2026-05-28 20:31:56,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 22:32:54] 2026-05-28 20:31:56,655 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 22:32:54] 2026-05-28 20:31:56,655 | INFO     | update_server=False
[2026-05-28 22:32:54] 2026-05-28 20:31:56,655 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 22:32:54] 2026-05-28 20:31:56,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 22:32:54] 2026-05-28 20:31:56,655 | INFO     | aborting loop
[2026-05-28 22:32:54] 2026-05-28 20:31:56,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 22:32:54] 2026-05-28 20:31:56,698 | INFO     | all data control threads have been joined
[2026-05-28 22:32:54] 2026-05-28 20:31:57,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 22:32:54] 2026-05-28 20:31:57,509 | INFO     | all payload control threads have been joined
[2026-05-28 22:32:54] 2026-05-28 20:31:57,661 | INFO     | [job] retrieve thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:57,661 | INFO     | [job] job monitor thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:57,674 | INFO     | all job control threads have been joined
[2026-05-28 22:32:54] 2026-05-28 20:31:57,705 | INFO     | [data] control thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:57,921 | INFO     | [payload] validate_post thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:57,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 22:32:54] 2026-05-28 20:31:58,037 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,327 | INFO     | [data] copytool_in thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,516 | INFO     | [payload] control thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,536 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,546 | INFO     | [payload] failed_post thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,636 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,669 | INFO     | [data] copytool_out thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,680 | INFO     | [job] control thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,978 | INFO     | [job] queue monitor thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:58,985 | INFO     | [job] validate thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:31:59,054 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:32:01,324 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 22:32:54] 2026-05-28 20:32:25,666 | INFO     | PID=4382 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-28 22:32:54] 2026-05-28 20:32:25,666 | INFO     | .. there are 2 such processes running
[2026-05-28 22:32:54] 2026-05-28 20:32:25,675 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 22:32:54] 2026-05-28 20:32:25,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 22:32:54] 2026-05-28 20:32:25,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 22:32:54] 2026-05-28 20:32:42,571 | INFO     | [monitor] cgroup control has ended
[2026-05-28 22:32:54] 2026-05-28 20:32:44,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796481795904)>', '<ExcThread(monitor, started 139796169070336)>']
[2026-05-28 22:32:54] 2026-05-28 20:32:44,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 22:32:54] 2026-05-28 20:32:44,789 | INFO     | [monitor] control thread has ended
[2026-05-28 22:32:54] 2026-05-28 20:32:49,220 | INFO     | all workflow threads have been joined
[2026-05-28 22:32:54] 2026-05-28 20:32:49,221 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 22:32:54] 2026-05-28 20:32:49,221 | INFO     | traces error code: 0
[2026-05-28 22:32:54] 2026-05-28 20:32:49,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 22:32:54] 2026-05-28 20:32:49,728 [wrapper] ==== pilot stdout END ====
[2026-05-28 22:32:54] 2026-05-28 20:32:49,855 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 22:32:54] 2026-05-28 20:32:49,972 [wrapper] pilotpid: 4382
[2026-05-28 22:32:54] 2026-05-28 20:32:50,086 [wrapper] Pilot exit status: 0
[2026-05-28 22:32:54] 2026-05-28 20:32:50,480 [wrapper] pandaids: 7155538201
[2026-05-28 22:32:54] 2026-05-28 20:32:51,560 [wrapper] cleanup supervisor_pilot 15610 4383
[2026-05-28 22:32:54] 2026-05-28 20:32:51,696 [wrapper] Test setup, not cleaning
[2026-05-28 22:32:54] 2026-05-28 20:32:51,798 [wrapper] apfmon messages muted
[2026-05-28 22:32:54] 2026-05-28 20:32:51,888 [wrapper] ==== wrapper stdout END ====
[2026-05-28 22:32:54] 2026-05-28 20:32:51,963 [wrapper] ==== wrapper stderr END ====
[2026-05-28 22:32:54]  *** Error codes and diagnostics ***
[2026-05-28 22:32:54]     "exeErrorCode": 0,
[2026-05-28 22:32:54]     "pilotErrorCode": 0,
[2026-05-28 22:32:54]  *** Listing of results directory ***
[2026-05-28 22:32:54] total 439644
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc    709501 May 28 06:24 pilot3.tar.gz
[2026-05-28 22:32:54] -rwx------. 1 boinc boinc     36281 May 28 06:29 runpilot2-wrapper.sh
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc      5631 May 28 06:29 queuedata.json
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc       100 May 28 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 22:32:54] -rwxr-xr-x. 1 boinc boinc      7986 May 28 18:33 run_atlas
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc       105 May 28 18:33 job.xml
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc      6305 May 28 18:33 init_data.xml
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc 266018546 May 28 18:33 EVNT.49539563._000197.pool.root.1
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc     15667 May 28 18:33 start_atlas.sh
[2026-05-28 22:32:54] drwxrwx--x. 2 boinc boinc        68 May 28 18:33 shared
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc    722750 May 28 18:33 input.tar.gz
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc         0 May 28 18:33 boinc_lockfile
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc      2566 May 28 18:34 pandaJob.out
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc   1251485 May 28 18:38 cric_ddmendpoints.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc       415 May 28 18:40 workernode_map.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc    996121 May 28 18:40 agis_schedconf.cvmfs.json
[2026-05-28 22:32:54] drwx------. 5 boinc boinc      4096 May 28 18:40 pilot3
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc 176912537 May 28 22:30 HITS.49545102._008126.pool.root.1
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc       489 May 28 22:30 boinc_task_state.xml
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc      1014 May 28 22:31 memory_monitor_summary.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc         0 May 28 22:31 agis_ddmendpoints.agis.ALL.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc    385437 May 28 22:31 log.49545102._008126.job.log.tgz.1
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc      6382 May 28 22:31 heartbeat_new.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc      6273 May 28 22:31 heartbeat.json
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc        95 May 28 22:32 pilot_heartbeat.json
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc        28 May 28 22:32 wrapper_checkpoint.txt
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc      8192 May 28 22:32 boinc_mmap_file
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc      4882 May 28 22:32 pilotlog.txt
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc   1291166 May 28 22:32 log.49545102._008126.job.log.1
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc       357 May 28 22:32 output.list
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc       410 May 28 22:32 runtime_log
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc   1689600 May 28 22:32 result.tar.gz
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc      8439 May 28 22:32 runtime_log.err
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc       655 May 28 22:32 c498b8c92c66.diag
[2026-05-28 22:32:54] -rw-r--r--. 1 boinc boinc     20624 May 28 22:32 stderr.txt
[2026-05-28 22:32:54] HITS file was successfully produced:
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc 176912537 May 28 22:30 shared/HITS.pool.root.1
[2026-05-28 22:32:54]  *** Contents of shared directory: ***
[2026-05-28 22:32:54] total 434928
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc 266018546 May 28 18:33 ATLAS.root_0
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc     15667 May 28 18:33 start_atlas.sh
[2026-05-28 22:32:54] -rw-r--r--. 2 boinc boinc    722750 May 28 18:33 input.tar.gz
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc 176912537 May 28 22:30 HITS.pool.root.1
[2026-05-28 22:32:54] -rw-------. 1 boinc boinc   1689600 May 28 22:32 result.tar.gz
22:32:55 (347): run_atlas exited; CPU time 51102.371126
22:32:55 (347): called boinc_finish(0)

</stderr_txt>
]]>

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