Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:28:50 (22436): wrapper (7.7.26015): starting
17:28:50 (22436): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 17:28:50] Arguments: --nthreads 8
[2026-05-28 17:28:50] Threads: 8
[2026-05-28 17:28:50] Checking for CVMFS
[2026-05-28 17:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 17:28:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 17:28:52] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 17:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 17:28:54] 2.11.2.0 28827 61840 106368 159899 0 54 21210750 25165824 1027 130560 0 24971663 99.884 16536574 8031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 17:28:54] CVMFS is ok
[2026-05-28 17:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 17:28:54] Checking for apptainer binary...
[2026-05-28 17:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 17:28:54] Running /usr/bin/apptainer --version
[2026-05-28 17:28:54] apptainer version 1.3.2-1.el7
[2026-05-28 17:28:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 17:29:16] cg-vwn243.simple-grid.lan
[2026-05-28 17:29:16] apptainer works
[2026-05-28 17:29:16] Set ATHENA_PROC_NUMBER=8
[2026-05-28 17:29:16] Set ATHENA_CORE_NUMBER=8
[2026-05-28 17:29:16] Starting ATLAS job with PandaID=7155490016
[2026-05-28 17:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 21:40:05]  *** The last 200 lines of the pilot log: ***
[2026-05-28 21:40:05] 2026-05-28 19:38:59,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,120 | INFO     | log transfer has been attempted: DONE
[2026-05-28 21:40:05] 2026-05-28 19:38:59,120 | INFO     | job 7155490016 has finished - writing final server update
[2026-05-28 21:40:05] 2026-05-28 19:38:59,120 | INFO     | total number of processed events: 400 (read)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,122 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7155490016/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,123 | INFO     | extracted standard info from prmon json
[2026-05-28 21:40:05] 2026-05-28 19:38:59,123 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 21:40:05] 2026-05-28 19:38:59,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 21:40:05] 2026-05-28 19:38:59,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 21:40:05] 2026-05-28 19:38:59,129 | INFO     | fitting pss+swap vs Time
[2026-05-28 21:40:05] 2026-05-28 19:38:59,129 | INFO     | sum of square deviations: 3972995422.5
[2026-05-28 21:40:05] 2026-05-28 19:38:59,131 | INFO     | sum of deviations: 121384538273.49995
[2026-05-28 21:40:05] 2026-05-28 19:38:59,132 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,132 | INFO     | mean y: 2408934.5683760685
[2026-05-28 21:40:05] 2026-05-28 19:38:59,132 | INFO     | intersect: 2408934.5683760685
[2026-05-28 21:40:05] 2026-05-28 19:38:59,132 | INFO     | chi2: 9.339661111299682
[2026-05-28 21:40:05] 2026-05-28 19:38:59,133 | INFO     | sum of square deviations: 3723716330.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,135 | INFO     | sum of deviations: 150196326460.00003
[2026-05-28 21:40:05] 2026-05-28 19:38:59,135 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,135 | INFO     | mean y: 2426309.4104803493
[2026-05-28 21:40:05] 2026-05-28 19:38:59,135 | INFO     | intersect: 2426309.4104803493
[2026-05-28 21:40:05] 2026-05-28 19:38:59,136 | INFO     | chi2: 7.8319014760389125
[2026-05-28 21:40:05] 2026-05-28 19:38:59,136 | INFO     | current chi2=7.8319014760389125 (change=16.143622528622494 %)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,136 | INFO     | right removable region: 228
[2026-05-28 21:40:05] 2026-05-28 19:38:59,136 | INFO     | sum of square deviations: 3723716330.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,138 | INFO     | sum of deviations: 40110270925.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,139 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,139 | INFO     | mean y: 2458625.5327510918
[2026-05-28 21:40:05] 2026-05-28 19:38:59,139 | INFO     | intersect: 2458625.5327510918
[2026-05-28 21:40:05] 2026-05-28 19:38:59,139 | INFO     | chi2: 4.295260533818104
[2026-05-28 21:40:05] 2026-05-28 19:38:59,139 | INFO     | current chi2=4.295260533818104 (change=54.010531189173015 %)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,140 | INFO     | sum of square deviations: 3485088600.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,142 | INFO     | sum of deviations: -19343103964.999996
[2026-05-28 21:40:05] 2026-05-28 19:38:59,142 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,142 | INFO     | mean y: 2496554.3214285714
[2026-05-28 21:40:05] 2026-05-28 19:38:59,142 | INFO     | intersect: 2496554.3214285714
[2026-05-28 21:40:05] 2026-05-28 19:38:59,143 | INFO     | chi2: 1.7872257880528135
[2026-05-28 21:40:05] 2026-05-28 19:38:59,143 | INFO     | current chi2=1.7872257880528135 (change=58.39074780257558 %)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,143 | INFO     | sum of square deviations: 3256879670.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,145 | INFO     | sum of deviations: -28903473413.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,145 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,146 | INFO     | mean y: 2502889.9315068494
[2026-05-28 21:40:05] 2026-05-28 19:38:59,146 | INFO     | intersect: 2502889.9315068494
[2026-05-28 21:40:05] 2026-05-28 19:38:59,146 | INFO     | chi2: 1.6860055374286487
[2026-05-28 21:40:05] 2026-05-28 19:38:59,146 | INFO     | current chi2=1.6860055374286487 (change=5.663540180585942 %)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,146 | INFO     | left removable region: 15
[2026-05-28 21:40:05] 2026-05-28 19:38:59,147 | INFO     | sum of square deviations: 2996454322.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,148 | INFO     | sum of deviations: 1210145754.9999995
[2026-05-28 21:40:05] 2026-05-28 19:38:59,149 | INFO     | mean x (centered): 0.0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,149 | INFO     | mean y: 2523666.544600939
[2026-05-28 21:40:05] 2026-05-28 19:38:59,149 | INFO     | intersect: 2523666.544600939
[2026-05-28 21:40:05] 2026-05-28 19:38:59,149 | INFO     | chi2: 0.005237300173872942
[2026-05-28 21:40:05] 2026-05-28 19:38:59,150 | INFO     | current memory leak: 0.40 B/s (using 213 data points, chi2=0.01)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,150 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,176 | INFO     | ..............................
[2026-05-28 21:40:05] 2026-05-28 19:38:59,176 | INFO     | . Timing measurements:
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . get job = 0 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . initial setup = 121 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . payload setup = 233 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . stage-in = 0 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . payload execution = 14351 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . stage-out = 3 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | . log creation = 1 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,177 | INFO     | ..............................
[2026-05-28 21:40:05] 2026-05-28 19:38:59,622 | INFO     | 
[2026-05-28 21:40:05] 2026-05-28 19:38:59,622 | INFO     | job summary report
[2026-05-28 21:40:05] 2026-05-28 19:38:59,622 | INFO     | --------------------------------------------------
[2026-05-28 21:40:05] 2026-05-28 19:38:59,622 | INFO     | PanDA job id: 7155490016
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | task id: 49545102
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | errors: (none)
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | pilot state: finished 
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | transexitcode: 0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | exeerrorcode: 0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | exeerrordiag: 
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | exitcode: 0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | exitmsg: OK
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | cpuconsumptiontime: 53020 s
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | nevents: 400
[2026-05-28 21:40:05] 2026-05-28 19:38:59,623 | INFO     | neventsw: 0
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | pid: 30920
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | pgrp: 30920
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | corecount: 8
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | event service: False
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | sizes: {0: 2265178, 1: 2265863, 2: 2267692, 12: 2267692, 14589: 2298570, 14590: 2298569, 14593: 2307751, 14596: 2308001}
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | --------------------------------------------------
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | 
[2026-05-28 21:40:05] 2026-05-28 19:38:59,624 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 21:40:05] 2026-05-28 19:39:00,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,199 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 21:40:05] 2026-05-28 19:39:00,199 | INFO     | job 7155490016 has completed (purged errors)
[2026-05-28 21:40:05] 2026-05-28 19:39:00,199 | INFO     | overall cleanup function is called
[2026-05-28 21:40:05] 2026-05-28 19:39:01,207 | INFO     | --- collectZombieJob: --- 10, [30920]
[2026-05-28 21:40:05] 2026-05-28 19:39:01,207 | INFO     | zombie collector waiting for pid 30920
[2026-05-28 21:40:05] 2026-05-28 19:39:01,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 21:40:05] 2026-05-28 19:39:01,208 | INFO     | collected zombie processes
[2026-05-28 21:40:05] 2026-05-28 19:39:01,208 | INFO     | will attempt to kill all subprocesses of pid=30920
[2026-05-28 21:40:05] 2026-05-28 19:39:01,272 | INFO     | process IDs to be killed: [30920] (in reverse order)
[2026-05-28 21:40:05] 2026-05-28 19:39:01,936 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 21:40:05] 2026-05-28 19:39:01,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 21:40:05] 2026-05-28 19:39:01,938 | INFO     | did not find any defunct processes belonging to 30920
[2026-05-28 21:40:05] 2026-05-28 19:39:01,940 | INFO     | did not find any defunct processes belonging to 30920
[2026-05-28 21:40:05] 2026-05-28 19:39:01,940 | INFO     | Ready for new job
[2026-05-28 21:40:05] 2026-05-28 19:39:01,942 | INFO     | ***************************************
[2026-05-28 21:40:05] 2026-05-28 19:39:01,942 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 21:40:05] 2026-05-28 19:39:01,943 | INFO     | ***************************************
[2026-05-28 21:40:05] 2026-05-28 19:39:01,943 | INFO     | 
[2026-05-28 21:40:05] 2026-05-28 19:39:01,943 | INFO     | pilot is running in a VM
[2026-05-28 21:40:05] 2026-05-28 19:39:01,943 | INFO     | architecture information:
[2026-05-28 21:40:05] 2026-05-28 19:39:01,954 | INFO     | executing command: cat /etc/os-release
[2026-05-28 21:40:05] 2026-05-28 19:39:02,197 | INFO     | cat /etc/os-release:
[2026-05-28 21:40:05] NAME="CentOS Linux"
[2026-05-28 21:40:05] VERSION="7 (Core)"
[2026-05-28 21:40:05] ID="centos"
[2026-05-28 21:40:05] ID_LIKE="rhel fedora"
[2026-05-28 21:40:05] VERSION_ID="7"
[2026-05-28 21:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 21:40:05] ANSI_COLOR="0;31"
[2026-05-28 21:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 21:40:05] HOME_URL="https://www.centos.org/"
[2026-05-28 21:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 21:40:05] 
[2026-05-28 21:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 21:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 21:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 21:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 21:40:05] 
[2026-05-28 21:40:05] 2026-05-28 19:39:02,198 | INFO     | ***************************************
[2026-05-28 21:40:05] 2026-05-28 19:39:02,701 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-28 21:40:05] 2026-05-28 19:39:02,886 | INFO     | sufficient remaining disk space (495634612224 B)
[2026-05-28 21:40:05] 2026-05-28 19:39:02,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 21:40:05] 2026-05-28 19:39:02,886 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 21:40:05] 2026-05-28 19:39:02,886 | INFO     | update_server=False
[2026-05-28 21:40:05] 2026-05-28 19:39:02,886 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 21:40:05] 2026-05-28 19:39:02,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 21:40:05] 2026-05-28 19:39:02,892 | INFO     | all data control threads have been joined
[2026-05-28 21:40:05] 2026-05-28 19:39:03,117 | INFO     | all job control threads have been joined
[2026-05-28 21:40:05] 2026-05-28 19:39:03,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 21:40:05] 2026-05-28 19:39:03,136 | INFO     | aborting loop
[2026-05-28 21:40:05] 2026-05-28 19:39:03,617 | INFO     | all payload control threads have been joined
[2026-05-28 21:40:05] 2026-05-28 19:39:03,895 | INFO     | [job] retrieve thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:03,898 | INFO     | [data] control thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:03,899 | INFO     | [payload] validate_post thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,051 | INFO     | [data] copytool_in thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,123 | INFO     | [job] control thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,145 | INFO     | [job] job monitor thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,256 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 21:40:05] 2026-05-28 19:39:04,395 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,528 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,623 | INFO     | [payload] control thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:04,898 | INFO     | [data] copytool_out thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:05,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 21:40:05] 2026-05-28 19:39:05,237 | INFO     | [job] validate thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:05,249 | INFO     | [payload] failed_post thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:05,346 | INFO     | [job] queue monitor thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:09,134 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:13,321 | INFO     | job.realtimelogging is not enabled
[2026-05-28 21:40:05] 2026-05-28 19:39:14,327 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 21:40:05] 2026-05-28 19:39:32,964 | INFO     | PID=26406 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-28 21:40:05] 2026-05-28 19:39:32,965 | INFO     | .. there are 2 such processes running
[2026-05-28 21:40:05] 2026-05-28 19:39:32,966 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 21:40:05] 2026-05-28 19:39:32,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 21:40:05] 2026-05-28 19:39:32,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 21:40:05] 2026-05-28 19:39:55,479 | INFO     | [monitor] cgroup control has ended
[2026-05-28 21:40:05] 2026-05-28 19:39:55,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465180186432)>', '<ExcThread(monitor, started 140464615319296)>']
[2026-05-28 21:40:05] 2026-05-28 19:39:56,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 21:40:05] 2026-05-28 19:39:56,104 | INFO     | [monitor] control thread has ended
[2026-05-28 21:40:05] 2026-05-28 19:40:00,798 | INFO     | all workflow threads have been joined
[2026-05-28 21:40:05] 2026-05-28 19:40:00,798 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 21:40:05] 2026-05-28 19:40:00,798 | INFO     | traces error code: 0
[2026-05-28 21:40:05] 2026-05-28 19:40:00,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 21:40:05] 2026-05-28 19:40:01,060 [wrapper] ==== pilot stdout END ====
[2026-05-28 21:40:05] 2026-05-28 19:40:01,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 21:40:05] 2026-05-28 19:40:01,109 [wrapper] pilotpid: 26406
[2026-05-28 21:40:05] 2026-05-28 19:40:01,125 [wrapper] Pilot exit status: 0
[2026-05-28 21:40:05] 2026-05-28 19:40:01,602 [wrapper] pandaids: 7155490016
[2026-05-28 21:40:05] 2026-05-28 19:40:02,353 [wrapper] cleanup supervisor_pilot  5459 26407
[2026-05-28 21:40:05] 2026-05-28 19:40:02,457 [wrapper] Test setup, not cleaning
[2026-05-28 21:40:05] 2026-05-28 19:40:02,585 [wrapper] apfmon messages muted
[2026-05-28 21:40:05] 2026-05-28 19:40:02,697 [wrapper] ==== wrapper stdout END ====
[2026-05-28 21:40:05] 2026-05-28 19:40:02,755 [wrapper] ==== wrapper stderr END ====
[2026-05-28 21:40:05]  *** Error codes and diagnostics ***
[2026-05-28 21:40:05]     "exeErrorCode": 0,
[2026-05-28 21:40:05]     "pilotErrorCode": 0,
[2026-05-28 21:40:05]  *** Listing of results directory ***
[2026-05-28 21:40:05] total 436880
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc    709501 May 28 06:24 pilot3.tar.gz
[2026-05-28 21:40:05] -rwx------. 1 boinc boinc     36281 May 28 06:28 runpilot2-wrapper.sh
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc      5631 May 28 06:29 queuedata.json
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc       100 May 28 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 21:40:05] -rwxr-xr-x. 1 boinc boinc      7986 May 28 17:28 run_atlas
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc       105 May 28 17:28 job.xml
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc      6306 May 28 17:28 init_data.xml
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc 264282460 May 28 17:28 EVNT.49539563._000179.pool.root.1
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc     15667 May 28 17:28 start_atlas.sh
[2026-05-28 21:40:05] drwxrwx--x. 2 boinc boinc        68 May 28 17:28 shared
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc    722754 May 28 17:28 input.tar.gz
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc         0 May 28 17:28 boinc_lockfile
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc      2567 May 28 17:29 pandaJob.out
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc   1251485 May 28 17:33 cric_ddmendpoints.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc       415 May 28 17:35 workernode_map.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc    996105 May 28 17:35 agis_schedconf.cvmfs.json
[2026-05-28 21:40:05] drwx------. 5 boinc boinc      4096 May 28 17:35 pilot3
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc 175649219 May 28 21:37 HITS.49545102._007726.pool.root.1
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc       489 May 28 21:38 boinc_task_state.xml
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc      1016 May 28 21:38 memory_monitor_summary.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc         0 May 28 21:38 agis_ddmendpoints.agis.ALL.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc    393229 May 28 21:38 log.49545102._007726.job.log.tgz.1
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc      6379 May 28 21:38 heartbeat_new.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc      6270 May 28 21:38 heartbeat.json
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc        95 May 28 21:39 pilot_heartbeat.json
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc      8192 May 28 21:39 boinc_mmap_file
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc        28 May 28 21:39 wrapper_checkpoint.txt
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc      4955 May 28 21:40 pilotlog.txt
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc   1360962 May 28 21:40 log.49545102._007726.job.log.1
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc       357 May 28 21:40 output.list
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc       410 May 28 21:40 runtime_log
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc   1771520 May 28 21:40 result.tar.gz
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc      8439 May 28 21:40 runtime_log.err
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc       656 May 28 21:40 c487865c9c6d.diag
[2026-05-28 21:40:05] -rw-r--r--. 1 boinc boinc     20642 May 28 21:40 stderr.txt
[2026-05-28 21:40:05] HITS file was successfully produced:
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc 175649219 May 28 21:37 shared/HITS.pool.root.1
[2026-05-28 21:40:05]  *** Contents of shared directory: ***
[2026-05-28 21:40:05] total 432084
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc 264282460 May 28 17:28 ATLAS.root_0
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc     15667 May 28 17:28 start_atlas.sh
[2026-05-28 21:40:05] -rw-r--r--. 2 boinc boinc    722754 May 28 17:28 input.tar.gz
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc 175649219 May 28 21:37 HITS.pool.root.1
[2026-05-28 21:40:05] -rw-------. 1 boinc boinc   1771520 May 28 21:40 result.tar.gz
21:40:06 (22436): run_atlas exited; CPU time 53164.265475
21:40:06 (22436): called boinc_finish(0)

</stderr_txt>
]]>

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