Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:01 (27963): wrapper (7.7.26015): starting
14:55:01 (27963): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 14:55:01] Arguments: --nthreads 8
[2026-05-28 14:55:01] Threads: 8
[2026-05-28 14:55:01] Checking for CVMFS
[2026-05-28 14:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 14:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 14:55:02] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 14:55:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 14:55:04] 2.11.2.0 3154 61705 137392 159897 2 56 25071479 25165825 1027 130560 0 31291881 99.885 11054131 6858 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 14:55:04] CVMFS is ok
[2026-05-28 14:55:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 14:55:04] Checking for apptainer binary...
[2026-05-28 14:55:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 14:55:04] Running /usr/bin/apptainer --version
[2026-05-28 14:55:04] apptainer version 1.3.2-1.el7
[2026-05-28 14:55:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 14:55:17] cg-vwn215.simple-grid.lan
[2026-05-28 14:55:17] apptainer works
[2026-05-28 14:55:18] Set ATHENA_PROC_NUMBER=8
[2026-05-28 14:55:18] Set ATHENA_CORE_NUMBER=8
[2026-05-28 14:55:18] Starting ATLAS job with PandaID=7155302512
[2026-05-28 14:55:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 17:53:11]  *** The last 200 lines of the pilot log: ***
[2026-05-28 17:53:11] 2026-05-28 15:52:10,954 | INFO     | this job has now completed (state=finished)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,954 | INFO     | log transfer has been attempted: DONE
[2026-05-28 17:53:11] 2026-05-28 15:52:10,955 | INFO     | job 7155302512 has finished - writing final server update
[2026-05-28 17:53:11] 2026-05-28 15:52:10,955 | INFO     | total number of processed events: 400 (read)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,957 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7155302512/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,957 | INFO     | extracted standard info from prmon json
[2026-05-28 17:53:11] 2026-05-28 15:52:10,958 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 17:53:11] 2026-05-28 15:52:10,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 17:53:11] 2026-05-28 15:52:10,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 17:53:11] 2026-05-28 15:52:10,961 | INFO     | fitting pss+swap vs Time
[2026-05-28 17:53:11] 2026-05-28 15:52:10,962 | INFO     | sum of square deviations: 1342841922.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,963 | INFO     | sum of deviations: 68254317151.99999
[2026-05-28 17:53:11] 2026-05-28 15:52:10,963 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,963 | INFO     | mean y: 2421860.1288343556
[2026-05-28 17:53:11] 2026-05-28 15:52:10,963 | INFO     | intersect: 2421860.1288343556
[2026-05-28 17:53:11] 2026-05-28 15:52:10,963 | INFO     | chi2: 7.721698479500744
[2026-05-28 17:53:11] 2026-05-28 15:52:10,964 | INFO     | sum of square deviations: 1223016419.5
[2026-05-28 17:53:11] 2026-05-28 15:52:10,965 | INFO     | sum of deviations: 76983617415.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,965 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,965 | INFO     | mean y: 2432624.9873417723
[2026-05-28 17:53:11] 2026-05-28 15:52:10,965 | INFO     | intersect: 2432624.9873417723
[2026-05-28 17:53:11] 2026-05-28 15:52:10,966 | INFO     | chi2: 7.034358975354373
[2026-05-28 17:53:11] 2026-05-28 15:52:10,966 | INFO     | current chi2=7.034358975354373 (change=8.90140305233482 %)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,966 | INFO     | right removable region: 157
[2026-05-28 17:53:11] 2026-05-28 15:52:10,966 | INFO     | sum of square deviations: 1223016419.5
[2026-05-28 17:53:11] 2026-05-28 15:52:10,967 | INFO     | sum of deviations: 11756037272.499996
[2026-05-28 17:53:11] 2026-05-28 15:52:10,967 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,967 | INFO     | mean y: 2493697.6265822784
[2026-05-28 17:53:11] 2026-05-28 15:52:10,967 | INFO     | intersect: 2493697.6265822784
[2026-05-28 17:53:11] 2026-05-28 15:52:10,968 | INFO     | chi2: 2.581044051587602
[2026-05-28 17:53:11] 2026-05-28 15:52:10,968 | INFO     | current chi2=2.581044051587602 (change=66.5741409297494 %)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,968 | INFO     | sum of square deviations: 1110539892.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | sum of deviations: -19768097248.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | mean y: 2536154.6732026143
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | intersect: 2536154.6732026143
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | chi2: 0.8815680218789888
[2026-05-28 17:53:11] 2026-05-28 15:52:10,969 | INFO     | current chi2=0.8815680218789888 (change=65.84451856461978 %)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,970 | INFO     | sum of square deviations: 1005179777.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | sum of deviations: -23146045936.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | mean y: 2540943.108108108
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | intersect: 2540943.108108108
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | chi2: 0.825998899418914
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | current chi2=0.825998899418914 (change=6.303441263855484 %)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,971 | INFO     | left removable region: 15
[2026-05-28 17:53:11] 2026-05-28 15:52:10,976 | INFO     | sum of square deviations: 887813855.5
[2026-05-28 17:53:11] 2026-05-28 15:52:10,977 | INFO     | sum of deviations: -12390031226.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,977 | INFO     | mean x (centered): 0.0
[2026-05-28 17:53:11] 2026-05-28 15:52:10,977 | INFO     | mean y: 2557190.0422535213
[2026-05-28 17:53:11] 2026-05-28 15:52:10,977 | INFO     | intersect: 2557190.0422535213
[2026-05-28 17:53:11] 2026-05-28 15:52:10,978 | INFO     | chi2: 0.025990702802437447
[2026-05-28 17:53:11] 2026-05-28 15:52:10,978 | INFO     | current memory leak: -13.96 B/s (using 142 data points, chi2=0.03)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,978 | INFO     | could have reported an average CPU frequency of 2000 MHz (9 samples)
[2026-05-28 17:53:11] 2026-05-28 15:52:10,999 | INFO     | ..............................
[2026-05-28 17:53:11] 2026-05-28 15:52:10,999 | INFO     | . Timing measurements:
[2026-05-28 17:53:11] 2026-05-28 15:52:10,999 | INFO     | . get job = 0 s
[2026-05-28 17:53:11] 2026-05-28 15:52:10,999 | INFO     | . initial setup = 117 s
[2026-05-28 17:53:11] 2026-05-28 15:52:10,999 | INFO     | . payload setup = 144 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,000 | INFO     | . stage-in = 0 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,000 | INFO     | . payload execution = 10057 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,000 | INFO     | . stage-out = 3 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,000 | INFO     | . log creation = 1 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,000 | INFO     | ..............................
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | 
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | job summary report
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | --------------------------------------------------
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | PanDA job id: 7155302512
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | task id: 49545102
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | errors: (none)
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 17:53:11] 2026-05-28 15:52:11,121 | INFO     | pilot state: finished 
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | transexitcode: 0
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | exeerrorcode: 0
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | exeerrordiag: 
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | exitcode: 0
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | exitmsg: OK
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | cpuconsumptiontime: 49562 s
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | nevents: 400
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | neventsw: 0
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | pid: 4085
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | pgrp: 4085
[2026-05-28 17:53:11] 2026-05-28 15:52:11,122 | INFO     | corecount: 8
[2026-05-28 17:53:11] 2026-05-28 15:52:11,123 | INFO     | event service: False
[2026-05-28 17:53:11] 2026-05-28 15:52:11,123 | INFO     | sizes: {0: 2265778, 1: 2243080, 2: 2267691, 12: 2267691, 10206: 2296364, 10207: 2296363, 10210: 2305547, 10212: 2305603, 10214: 2305861}
[2026-05-28 17:53:11] 2026-05-28 15:52:11,123 | INFO     | --------------------------------------------------
[2026-05-28 17:53:11] 2026-05-28 15:52:11,123 | INFO     | 
[2026-05-28 17:53:11] 2026-05-28 15:52:11,123 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-05-28 17:53:11] 2026-05-28 15:52:11,653 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 17:53:11] 2026-05-28 15:52:11,656 | INFO     | job 7155302512 has completed (purged errors)
[2026-05-28 17:53:11] 2026-05-28 15:52:11,656 | INFO     | overall cleanup function is called
[2026-05-28 17:53:11] 2026-05-28 15:52:12,665 | INFO     | --- collectZombieJob: --- 10, [4085]
[2026-05-28 17:53:11] 2026-05-28 15:52:12,665 | INFO     | zombie collector waiting for pid 4085
[2026-05-28 17:53:11] 2026-05-28 15:52:12,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 17:53:11] 2026-05-28 15:52:12,665 | INFO     | collected zombie processes
[2026-05-28 17:53:11] 2026-05-28 15:52:12,665 | INFO     | will attempt to kill all subprocesses of pid=4085
[2026-05-28 17:53:11] 2026-05-28 15:52:12,730 | INFO     | process IDs to be killed: [4085] (in reverse order)
[2026-05-28 17:53:11] 2026-05-28 15:52:13,769 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 17:53:11] 2026-05-28 15:52:13,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 17:53:11] 2026-05-28 15:52:13,772 | INFO     | did not find any defunct processes belonging to 4085
[2026-05-28 17:53:11] 2026-05-28 15:52:13,773 | INFO     | did not find any defunct processes belonging to 4085
[2026-05-28 17:53:11] 2026-05-28 15:52:13,774 | INFO     | Ready for new job
[2026-05-28 17:53:11] 2026-05-28 15:52:13,775 | INFO     | ***************************************
[2026-05-28 17:53:11] 2026-05-28 15:52:13,775 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 17:53:11] 2026-05-28 15:52:13,776 | INFO     | ***************************************
[2026-05-28 17:53:11] 2026-05-28 15:52:13,776 | INFO     | 
[2026-05-28 17:53:11] 2026-05-28 15:52:13,776 | INFO     | pilot is running in a VM
[2026-05-28 17:53:11] 2026-05-28 15:52:13,776 | INFO     | architecture information:
[2026-05-28 17:53:11] 2026-05-28 15:52:13,785 | INFO     | executing command: cat /etc/os-release
[2026-05-28 17:53:11] 2026-05-28 15:52:14,076 | INFO     | cat /etc/os-release:
[2026-05-28 17:53:11] NAME="CentOS Linux"
[2026-05-28 17:53:11] VERSION="7 (Core)"
[2026-05-28 17:53:11] ID="centos"
[2026-05-28 17:53:11] ID_LIKE="rhel fedora"
[2026-05-28 17:53:11] VERSION_ID="7"
[2026-05-28 17:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 17:53:11] ANSI_COLOR="0;31"
[2026-05-28 17:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 17:53:11] HOME_URL="https://www.centos.org/"
[2026-05-28 17:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 17:53:11] 
[2026-05-28 17:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 17:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 17:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 17:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 17:53:11] 
[2026-05-28 17:53:11] 2026-05-28 15:52:14,076 | INFO     | ***************************************
[2026-05-28 17:53:11] 2026-05-28 15:52:14,580 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-05-28 17:53:11] 2026-05-28 15:52:14,893 | INFO     | sufficient remaining disk space (497705549824 B)
[2026-05-28 17:53:11] 2026-05-28 15:52:14,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 17:53:11] 2026-05-28 15:52:14,894 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 17:53:11] 2026-05-28 15:52:14,894 | INFO     | update_server=False
[2026-05-28 17:53:11] 2026-05-28 15:52:14,894 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 17:53:11] 2026-05-28 15:52:15,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 17:53:11] 2026-05-28 15:52:15,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 17:53:11] 2026-05-28 15:52:15,186 | INFO     | aborting loop
[2026-05-28 17:53:11] 2026-05-28 15:52:15,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 17:53:11] 2026-05-28 15:52:15,713 | INFO     | all data control threads have been joined
[2026-05-28 17:53:11] 2026-05-28 15:52:15,780 | INFO     | all job control threads have been joined
[2026-05-28 17:53:11] 2026-05-28 15:52:15,853 | INFO     | all payload control threads have been joined
[2026-05-28 17:53:11] 2026-05-28 15:52:15,900 | INFO     | [job] retrieve thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:15,998 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,001 | INFO     | [data] copytool_in thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 17:53:11] 2026-05-28 15:52:16,155 | INFO     | [payload] validate_post thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,192 | INFO     | [job] job monitor thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,659 | INFO     | [job] validate thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,719 | INFO     | [data] control thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,786 | INFO     | [job] control thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,797 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:16,859 | INFO     | [payload] control thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:17,006 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:17,010 | INFO     | [payload] failed_post thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:17,143 | INFO     | [job] queue monitor thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:17,240 | INFO     | [data] copytool_out thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:19,097 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 17:53:11] 2026-05-28 15:52:42,987 | INFO     | PID=31957 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-28 17:53:11] 2026-05-28 15:52:42,988 | INFO     | .. there are 2 such processes running
[2026-05-28 17:53:11] 2026-05-28 15:52:42,988 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 17:53:11] 2026-05-28 15:52:42,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 17:53:11] 2026-05-28 15:52:42,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 17:53:11] 2026-05-28 15:53:01,607 | INFO     | [monitor] cgroup control has ended
[2026-05-28 17:53:11] 2026-05-28 15:53:02,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888598300480)>', '<ExcThread(monitor, started 139887940458240)>']
[2026-05-28 17:53:11] 2026-05-28 15:53:03,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 17:53:11] 2026-05-28 15:53:03,109 | INFO     | [monitor] control thread has ended
[2026-05-28 17:53:11] 2026-05-28 15:53:07,291 | INFO     | all workflow threads have been joined
[2026-05-28 17:53:11] 2026-05-28 15:53:07,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 17:53:11] 2026-05-28 15:53:07,291 | INFO     | traces error code: 0
[2026-05-28 17:53:11] 2026-05-28 15:53:07,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 17:53:11] 2026-05-28 15:53:07,847 [wrapper] ==== pilot stdout END ====
[2026-05-28 17:53:11] 2026-05-28 15:53:07,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 17:53:11] 2026-05-28 15:53:08,073 [wrapper] pilotpid: 31957
[2026-05-28 17:53:11] 2026-05-28 15:53:08,186 [wrapper] Pilot exit status: 0
[2026-05-28 17:53:11] 2026-05-28 15:53:08,747 [wrapper] pandaids: 7155302512
[2026-05-28 17:53:11] 2026-05-28 15:53:09,904 [wrapper] cleanup supervisor_pilot 25333 31958
[2026-05-28 17:53:11] 2026-05-28 15:53:09,939 [wrapper] Test setup, not cleaning
[2026-05-28 17:53:11] 2026-05-28 15:53:10,043 [wrapper] apfmon messages muted
[2026-05-28 17:53:11] 2026-05-28 15:53:10,191 [wrapper] ==== wrapper stdout END ====
[2026-05-28 17:53:11] 2026-05-28 15:53:10,282 [wrapper] ==== wrapper stderr END ====
[2026-05-28 17:53:11]  *** Error codes and diagnostics ***
[2026-05-28 17:53:11]     "exeErrorCode": 0,
[2026-05-28 17:53:11]     "pilotErrorCode": 0,
[2026-05-28 17:53:11]  *** Listing of results directory ***
[2026-05-28 17:53:11] total 431868
[2026-05-28 17:53:11] -rwx------. 1 boinc boinc     36281 May 28 05:02 runpilot2-wrapper.sh
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc      5631 May 28 05:02 queuedata.json
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc    709501 May 28 05:02 pilot3.tar.gz
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc       100 May 28 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 17:53:11] -rwxr-xr-x. 1 boinc boinc      7986 May 28 14:55 run_atlas
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc       105 May 28 14:55 job.xml
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc 262160636 May 28 14:55 EVNT.49539563._000192.pool.root.1
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc    722734 May 28 14:55 input.tar.gz
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc      6308 May 28 14:55 init_data.xml
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc     15667 May 28 14:55 start_atlas.sh
[2026-05-28 17:53:11] drwxrwx--x. 2 boinc boinc        68 May 28 14:55 shared
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc         0 May 28 14:55 boinc_lockfile
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc      2566 May 28 14:55 pandaJob.out
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc         0 May 28 14:59 agis_ddmendpoints.agis.ALL.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc   1251485 May 28 14:59 cric_ddmendpoints.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc       413 May 28 15:01 workernode_map.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc    996137 May 28 15:01 agis_schedconf.cvmfs.json
[2026-05-28 17:53:11] drwx------. 5 boinc boinc      4096 May 28 15:01 pilot3
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc 173528363 May 28 17:50 HITS.49545102._004469.pool.root.1
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc       489 May 28 17:51 boinc_task_state.xml
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc        95 May 28 17:51 pilot_heartbeat.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc      1022 May 28 17:51 memory_monitor_summary.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc    344738 May 28 17:52 log.49545102._004469.job.log.tgz.1
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc      6390 May 28 17:52 heartbeat_new.json
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc      6281 May 28 17:52 heartbeat.json
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc        28 May 28 17:52 wrapper_checkpoint.txt
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc      8192 May 28 17:52 boinc_mmap_file
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc      4884 May 28 17:53 pilotlog.txt
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc    967703 May 28 17:53 log.49545102._004469.job.log.1
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc       357 May 28 17:53 output.list
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc       410 May 28 17:53 runtime_log
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc   1331200 May 28 17:53 result.tar.gz
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc      8455 May 28 17:53 runtime_log.err
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc       655 May 28 17:53 b03fd8018a5d.diag
[2026-05-28 17:53:11] -rw-r--r--. 1 boinc boinc     20644 May 28 17:53 stderr.txt
[2026-05-28 17:53:11] HITS file was successfully produced:
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc 173528363 May 28 17:50 shared/HITS.pool.root.1
[2026-05-28 17:53:11]  *** Contents of shared directory: ***
[2026-05-28 17:53:11] total 427508
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc 262160636 May 28 14:55 ATLAS.root_0
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc    722734 May 28 14:55 input.tar.gz
[2026-05-28 17:53:11] -rw-r--r--. 2 boinc boinc     15667 May 28 14:55 start_atlas.sh
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc 173528363 May 28 17:50 HITS.pool.root.1
[2026-05-28 17:53:11] -rw-------. 1 boinc boinc   1331200 May 28 17:53 result.tar.gz
17:53:13 (27963): run_atlas exited; CPU time 49653.465249
17:53:13 (27963): called boinc_finish(0)

</stderr_txt>
]]>

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