Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:27 (19126): wrapper (7.7.26015): starting
10:42:27 (19126): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 10:42:27] Arguments: --nthreads 8
[2026-05-28 10:42:27] Threads: 8
[2026-05-28 10:42:27] Checking for CVMFS
[2026-05-28 10:42:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 10:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 10:42:28] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 10:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 10:42:30] 2.11.2.0 29547 61436 102668 159889 0 53 18401110 25165824 1027 130560 0 29410766 99.940 13299702 6688 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 10:42:30] CVMFS is ok
[2026-05-28 10:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 10:42:30] Checking for apptainer binary...
[2026-05-28 10:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 10:42:30] Running /usr/bin/apptainer --version
[2026-05-28 10:42:30] apptainer version 1.3.2-1.el7
[2026-05-28 10:42:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 10:42:40] cg-vwn274.simple-grid.lan
[2026-05-28 10:42:40] apptainer works
[2026-05-28 10:42:40] Set ATHENA_PROC_NUMBER=8
[2026-05-28 10:42:40] Set ATHENA_CORE_NUMBER=8
[2026-05-28 10:42:40] Starting ATLAS job with PandaID=7154791001
[2026-05-28 10:42:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 15:05:23]  *** The last 200 lines of the pilot log: ***
[2026-05-28 15:05:24] 2026-05-28 13:04:23,158 | INFO     | log transfer has been attempted: DONE
[2026-05-28 15:05:24] 2026-05-28 13:04:23,158 | INFO     | job 7154791001 has finished - writing final server update
[2026-05-28 15:05:24] 2026-05-28 13:04:23,159 | INFO     | total number of processed events: 400 (read)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,165 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7154791001/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,166 | INFO     | extracted standard info from prmon json
[2026-05-28 15:05:24] 2026-05-28 13:04:23,166 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 15:05:24] 2026-05-28 13:04:23,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 15:05:24] 2026-05-28 13:04:23,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 15:05:24] 2026-05-28 13:04:23,172 | INFO     | fitting pss+swap vs Time
[2026-05-28 15:05:24] 2026-05-28 13:04:23,173 | INFO     | sum of square deviations: 4616114457.5
[2026-05-28 15:05:24] 2026-05-28 13:04:23,175 | INFO     | sum of deviations: 158967189103.5
[2026-05-28 15:05:24] 2026-05-28 13:04:23,175 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,175 | INFO     | mean y: 2426546.5
[2026-05-28 15:05:24] 2026-05-28 13:04:23,176 | INFO     | intersect: 2426546.5
[2026-05-28 15:05:24] 2026-05-28 13:04:23,176 | INFO     | chi2: 8.588138811180729
[2026-05-28 15:05:24] 2026-05-28 13:04:23,177 | INFO     | sum of square deviations: 4340323240.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,179 | INFO     | sum of deviations: 171630350300.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,179 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,179 | INFO     | mean y: 2433398.5643153526
[2026-05-28 15:05:24] 2026-05-28 13:04:23,179 | INFO     | intersect: 2433398.5643153526
[2026-05-28 15:05:24] 2026-05-28 13:04:23,180 | INFO     | chi2: 7.877160213948781
[2026-05-28 15:05:24] 2026-05-28 13:04:23,180 | INFO     | current chi2=7.877160213948781 (change=8.278610917494001 %)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,180 | INFO     | right removable region: 240
[2026-05-28 15:05:24] 2026-05-28 13:04:23,180 | INFO     | sum of square deviations: 4340323240.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,183 | INFO     | sum of deviations: 71010018260.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,183 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,183 | INFO     | mean y: 2475165.1867219917
[2026-05-28 15:05:24] 2026-05-28 13:04:23,183 | INFO     | intersect: 2475165.1867219917
[2026-05-28 15:05:24] 2026-05-28 13:04:23,184 | INFO     | chi2: 3.3226225769475954
[2026-05-28 15:05:24] 2026-05-28 13:04:23,184 | INFO     | current chi2=3.3226225769475954 (change=61.311494259711566 %)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,184 | INFO     | sum of square deviations: 4075741535.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,186 | INFO     | sum of deviations: 9893039535.999998
[2026-05-28 15:05:24] 2026-05-28 13:04:23,187 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,187 | INFO     | mean y: 2510308.0423728814
[2026-05-28 15:05:24] 2026-05-28 13:04:23,187 | INFO     | intersect: 2510308.0423728814
[2026-05-28 15:05:24] 2026-05-28 13:04:23,187 | INFO     | chi2: 0.9169097803340458
[2026-05-28 15:05:24] 2026-05-28 13:04:23,188 | INFO     | current chi2=0.9169097803340458 (change=72.40403449083928 %)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,188 | INFO     | sum of square deviations: 3822136780.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,190 | INFO     | sum of deviations: -4357507855.000002
[2026-05-28 15:05:24] 2026-05-28 13:04:23,190 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,190 | INFO     | mean y: 2518872.8181818184
[2026-05-28 15:05:24] 2026-05-28 13:04:23,191 | INFO     | intersect: 2518872.8181818184
[2026-05-28 15:05:24] 2026-05-28 13:04:23,191 | INFO     | chi2: 0.7973124218846203
[2026-05-28 15:05:24] 2026-05-28 13:04:23,191 | INFO     | current chi2=0.7973124218846203 (change=13.043525220753367 %)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,191 | INFO     | left removable region: 15
[2026-05-28 15:05:24] 2026-05-28 13:04:23,192 | INFO     | sum of square deviations: 3531973200.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,194 | INFO     | sum of deviations: 10707403748.999994
[2026-05-28 15:05:24] 2026-05-28 13:04:23,194 | INFO     | mean x (centered): 0.0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,194 | INFO     | mean y: 2528160.9111111113
[2026-05-28 15:05:24] 2026-05-28 13:04:23,194 | INFO     | intersect: 2528160.9111111113
[2026-05-28 15:05:24] 2026-05-28 13:04:23,195 | INFO     | chi2: 0.003328067417824905
[2026-05-28 15:05:24] 2026-05-28 13:04:23,195 | INFO     | current memory leak: 3.03 B/s (using 225 data points, chi2=0.00)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,195 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,203 | INFO     | ..............................
[2026-05-28 15:05:24] 2026-05-28 13:04:23,203 | INFO     | . Timing measurements:
[2026-05-28 15:05:24] 2026-05-28 13:04:23,203 | INFO     | . get job = 0 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,203 | INFO     | . initial setup = 118 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,203 | INFO     | . payload setup = 239 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,204 | INFO     | . stage-in = 0 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,204 | INFO     | . payload execution = 15081 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,204 | INFO     | . stage-out = 4 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,204 | INFO     | . log creation = 1 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,204 | INFO     | ..............................
[2026-05-28 15:05:24] 2026-05-28 13:04:23,433 | INFO     | 
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | job summary report
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | --------------------------------------------------
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | PanDA job id: 7154791001
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | task id: 49545130
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | errors: (none)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 15:05:24] 2026-05-28 13:04:23,434 | INFO     | pilot state: finished 
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | transexitcode: 0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | exeerrorcode: 0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | exeerrordiag: 
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | exitcode: 0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | exitmsg: OK
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | cpuconsumptiontime: 56656 s
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | nevents: 400
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | neventsw: 0
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | pid: 27586
[2026-05-28 15:05:24] 2026-05-28 13:04:23,435 | INFO     | pgrp: 27586
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | corecount: 8
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | event service: False
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | sizes: {0: 2265221, 1: 2265906, 2: 2267735, 15325: 2298740, 15330: 2307738, 15332: 2307794, 15335: 2308116}
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | --------------------------------------------------
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | 
[2026-05-28 15:05:24] 2026-05-28 13:04:23,436 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-28 15:05:24] 2026-05-28 13:04:23,837 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,837 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,837 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 15:05:24] 2026-05-28 13:04:23,845 | INFO     | job 7154791001 has completed (purged errors)
[2026-05-28 15:05:24] 2026-05-28 13:04:23,845 | INFO     | overall cleanup function is called
[2026-05-28 15:05:24] 2026-05-28 13:04:24,532 | INFO     | PID=23101 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-28 15:05:24] 2026-05-28 13:04:24,533 | INFO     | .. there are 2 such processes running
[2026-05-28 15:05:24] 2026-05-28 13:04:24,853 | INFO     | --- collectZombieJob: --- 10, [27586]
[2026-05-28 15:05:24] 2026-05-28 13:04:24,854 | INFO     | zombie collector waiting for pid 27586
[2026-05-28 15:05:24] 2026-05-28 13:04:24,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 15:05:24] 2026-05-28 13:04:24,854 | INFO     | collected zombie processes
[2026-05-28 15:05:24] 2026-05-28 13:04:24,854 | INFO     | will attempt to kill all subprocesses of pid=27586
[2026-05-28 15:05:24] 2026-05-28 13:04:24,913 | INFO     | process IDs to be killed: [27586] (in reverse order)
[2026-05-28 15:05:24] 2026-05-28 13:04:25,673 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 15:05:24] 2026-05-28 13:04:25,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 15:05:24] 2026-05-28 13:04:25,676 | INFO     | did not find any defunct processes belonging to 27586
[2026-05-28 15:05:24] 2026-05-28 13:04:25,678 | INFO     | did not find any defunct processes belonging to 27586
[2026-05-28 15:05:24] 2026-05-28 13:04:25,678 | INFO     | Ready for new job
[2026-05-28 15:05:24] 2026-05-28 13:04:25,680 | INFO     | ***************************************
[2026-05-28 15:05:24] 2026-05-28 13:04:25,680 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 15:05:24] 2026-05-28 13:04:25,680 | INFO     | ***************************************
[2026-05-28 15:05:24] 2026-05-28 13:04:25,680 | INFO     | 
[2026-05-28 15:05:24] 2026-05-28 13:04:25,687 | INFO     | pilot is running in a VM
[2026-05-28 15:05:24] 2026-05-28 13:04:25,687 | INFO     | architecture information:
[2026-05-28 15:05:24] 2026-05-28 13:04:25,693 | INFO     | executing command: cat /etc/os-release
[2026-05-28 15:05:24] 2026-05-28 13:04:26,002 | INFO     | cat /etc/os-release:
[2026-05-28 15:05:24] NAME="CentOS Linux"
[2026-05-28 15:05:24] VERSION="7 (Core)"
[2026-05-28 15:05:24] ID="centos"
[2026-05-28 15:05:24] ID_LIKE="rhel fedora"
[2026-05-28 15:05:24] VERSION_ID="7"
[2026-05-28 15:05:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 15:05:24] ANSI_COLOR="0;31"
[2026-05-28 15:05:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 15:05:24] HOME_URL="https://www.centos.org/"
[2026-05-28 15:05:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 15:05:24] 
[2026-05-28 15:05:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 15:05:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 15:05:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 15:05:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 15:05:24] 
[2026-05-28 15:05:24] 2026-05-28 13:04:26,002 | INFO     | ***************************************
[2026-05-28 15:05:24] 2026-05-28 13:04:26,506 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-28 15:05:24] 2026-05-28 13:04:26,707 | INFO     | sufficient remaining disk space (495384002560 B)
[2026-05-28 15:05:24] 2026-05-28 13:04:26,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 15:05:24] 2026-05-28 13:04:26,708 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 15:05:24] 2026-05-28 13:04:26,708 | INFO     | update_server=False
[2026-05-28 15:05:24] 2026-05-28 13:04:26,708 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 15:05:24] 2026-05-28 13:04:26,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 15:05:24] 2026-05-28 13:04:26,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 15:05:24] 2026-05-28 13:04:26,712 | INFO     | aborting loop
[2026-05-28 15:05:24] 2026-05-28 13:04:26,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 15:05:24] 2026-05-28 13:04:27,322 | INFO     | all job control threads have been joined
[2026-05-28 15:05:24] 2026-05-28 13:04:27,715 | INFO     | [job] retrieve thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:27,717 | INFO     | [job] job monitor thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:27,720 | INFO     | all data control threads have been joined
[2026-05-28 15:05:24] 2026-05-28 13:04:27,853 | INFO     | all payload control threads have been joined
[2026-05-28 15:05:24] 2026-05-28 13:04:27,951 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:27,956 | INFO     | [data] copytool_in thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:27,967 | INFO     | [job] validate thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,157 | INFO     | [payload] failed_post thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,329 | INFO     | [job] control thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 15:05:24] 2026-05-28 13:04:28,649 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,717 | INFO     | [data] copytool_out thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,727 | INFO     | [data] control thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,860 | INFO     | [payload] control thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,907 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,909 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:28,986 | INFO     | [payload] validate_post thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:29,379 | INFO     | [job] queue monitor thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:30,872 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 15:05:24] 2026-05-28 13:04:56,656 | INFO     | PID=23101 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-28 15:05:24] 2026-05-28 13:04:56,656 | INFO     | .. there are 2 such processes running
[2026-05-28 15:05:24] 2026-05-28 13:04:56,657 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 15:05:24] 2026-05-28 13:04:56,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 15:05:24] 2026-05-28 13:04:56,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 15:05:24] 2026-05-28 13:05:12,230 | INFO     | [monitor] cgroup control has ended
[2026-05-28 15:05:24] 2026-05-28 13:05:13,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263264237376)>', '<ExcThread(monitor, started 140262617638656)>']
[2026-05-28 15:05:24] 2026-05-28 13:05:14,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 15:05:24] 2026-05-28 13:05:14,765 | INFO     | [monitor] control thread has ended
[2026-05-28 15:05:24] 2026-05-28 13:05:18,919 | INFO     | all workflow threads have been joined
[2026-05-28 15:05:24] 2026-05-28 13:05:18,920 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 15:05:24] 2026-05-28 13:05:18,920 | INFO     | traces error code: 0
[2026-05-28 15:05:24] 2026-05-28 13:05:18,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 15:05:24] 2026-05-28 13:05:19,137 [wrapper] ==== pilot stdout END ====
[2026-05-28 15:05:24] 2026-05-28 13:05:19,210 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 15:05:24] 2026-05-28 13:05:19,297 [wrapper] pilotpid: 23101
[2026-05-28 15:05:24] 2026-05-28 13:05:19,377 [wrapper] Pilot exit status: 0
[2026-05-28 15:05:24] 2026-05-28 13:05:19,742 [wrapper] pandaids: 7154791001
[2026-05-28 15:05:24] 2026-05-28 13:05:20,443 [wrapper] cleanup supervisor_pilot  2360 23102
[2026-05-28 15:05:24] 2026-05-28 13:05:20,454 [wrapper] Test setup, not cleaning
[2026-05-28 15:05:24] 2026-05-28 13:05:20,539 [wrapper] apfmon messages muted
[2026-05-28 15:05:24] 2026-05-28 13:05:20,678 [wrapper] ==== wrapper stdout END ====
[2026-05-28 15:05:24] 2026-05-28 13:05:20,788 [wrapper] ==== wrapper stderr END ====
[2026-05-28 15:05:24]  *** Error codes and diagnostics ***
[2026-05-28 15:05:24]     "exeErrorCode": 0,
[2026-05-28 15:05:24]     "pilotErrorCode": 0,
[2026-05-28 15:05:24]  *** Listing of results directory ***
[2026-05-28 15:05:24] total 468688
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc      5631 May 27 17:58 queuedata.json
[2026-05-28 15:05:24] -rwx------. 1 boinc boinc     36281 May 27 17:58 runpilot2-wrapper.sh
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc    709501 May 27 17:58 pilot3.tar.gz
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc       100 May 28 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 15:05:24] -rwxr-xr-x. 1 boinc boinc      7986 May 28 10:42 run_atlas
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc       105 May 28 10:42 job.xml
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc      6305 May 28 10:42 init_data.xml
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc 282323627 May 28 10:42 EVNT.49539717._000387.pool.root.1
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc     15667 May 28 10:42 start_atlas.sh
[2026-05-28 15:05:24] drwxrwx--x. 2 boinc boinc        68 May 28 10:42 shared
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc    722747 May 28 10:42 input.tar.gz
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc         0 May 28 10:42 boinc_lockfile
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc      2599 May 28 10:42 pandaJob.out
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc   1251485 May 28 10:46 cric_ddmendpoints.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc       415 May 28 10:48 workernode_map.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc    996128 May 28 10:48 agis_schedconf.cvmfs.json
[2026-05-28 15:05:24] drwx------. 5 boinc boinc      4096 May 28 10:48 pilot3
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc 190047430 May 28 15:02 HITS.49545130._009643.pool.root.1
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc       489 May 28 15:03 boinc_task_state.xml
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc        95 May 28 15:04 pilot_heartbeat.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc      1017 May 28 15:04 memory_monitor_summary.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc         0 May 28 15:04 agis_ddmendpoints.agis.ALL.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc    390215 May 28 15:04 log.49545130._009643.job.log.tgz.1
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc      6381 May 28 15:04 heartbeat_new.json
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc      6272 May 28 15:04 heartbeat.json
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc      8192 May 28 15:04 boinc_mmap_file
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc        28 May 28 15:04 wrapper_checkpoint.txt
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc      4883 May 28 15:05 pilotlog.txt
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc   1433987 May 28 15:05 log.49545130._009643.job.log.1
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc       357 May 28 15:05 output.list
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc       410 May 28 15:05 runtime_log
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc   1843200 May 28 15:05 result.tar.gz
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc      8439 May 28 15:05 runtime_log.err
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc       656 May 28 15:05 148a763c1a79.diag
[2026-05-28 15:05:24] -rw-r--r--. 1 boinc boinc     20697 May 28 15:05 stderr.txt
[2026-05-28 15:05:24] HITS file was successfully produced:
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc 190047430 May 28 15:02 shared/HITS.pool.root.1
[2026-05-28 15:05:24]  *** Contents of shared directory: ***
[2026-05-28 15:05:24] total 463828
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc 282323627 May 28 10:42 ATLAS.root_0
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc     15667 May 28 10:42 start_atlas.sh
[2026-05-28 15:05:24] -rw-r--r--. 2 boinc boinc    722747 May 28 10:42 input.tar.gz
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc 190047430 May 28 15:02 HITS.pool.root.1
[2026-05-28 15:05:24] -rw-------. 1 boinc boinc   1843200 May 28 15:05 result.tar.gz
15:05:25 (19126): run_atlas exited; CPU time 56802.875862
15:05:25 (19126): called boinc_finish(0)

</stderr_txt>
]]>

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