Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:32:08 (2256879): wrapper (7.7.26015): starting
05:32:08 (2256879): wrapper: running run_atlas (--nthreads 12)
[2026-05-28 05:32:08] Arguments: --nthreads 12
[2026-05-28 05:32:08] Threads: 12
[2026-05-28 05:32:08] Checking for CVMFS
[2026-05-28 05:32:08] No cvmfs_config command found, will try listing directly
[2026-05-28 05:32:08] CVMFS is ok
[2026-05-28 05:32:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 05:32:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 05:32:08] Further information can be found at the LHC@home message board.
[2026-05-28 05:32:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 05:32:08] Checking for apptainer binary...
[2026-05-28 05:32:08] which: no apptainer in ((null))
[2026-05-28 05:32:08] apptainer is not installed, using version from CVMFS
[2026-05-28 05:32:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 05:32:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-05-28 05:32:09] apptainer works
[2026-05-28 05:32:09] Set ATHENA_PROC_NUMBER=12
[2026-05-28 05:32:09] Set ATHENA_CORE_NUMBER=12
[2026-05-28 05:32:09] Starting ATLAS job with PandaID=7155170840
[2026-05-28 05:32:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 05:55:24]  *** The last 200 lines of the pilot log: ***
[2026-05-28 05:55:24]  guid=0c086156-10a2-4268-b49f-4c86d50fea28
[2026-05-28 05:55:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-28 05:55:24]  is_altstaged=None
[2026-05-28 05:55:24]  is_tar=False
[2026-05-28 05:55:24]  lfn=log.49545102._002100.job.log.tgz.1
[2026-05-28 05:55:24]  mtime=0
[2026-05-28 05:55:24]  protocol_id=None
[2026-05-28 05:55:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-28 05:55:24]  replicas=None
[2026-05-28 05:55:24]  scope=mc23_13p6TeV
[2026-05-28 05:55:24]  status=None
[2026-05-28 05:55:24]  status_code=0
[2026-05-28 05:55:24]  storage_token=
[2026-05-28 05:55:24]  surl=/var/lib/boinc/var/slot108/slots/2/PanDA_Pilot-7155170840/log.49545102._002100.job.log.tgz.1
[2026-05-28 05:55:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/f9/log.49545102._002100.job.log.tgz.1
[2026-05-28 05:55:24]  workdir=None
[2026-05-28 05:55:24] ]
[2026-05-28 05:55:24] 2026-05-28 03:54:33,455 | INFO     | transferring file log.49545102._002100.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/2/PanDA_Pilot-7155170840/log.49545102._002100.job.log.tgz.1 to /var/lib/
[2026-05-28 05:55:24] 2026-05-28 03:54:33,455 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/2/PanDA_Pilot-7155170840/log.49545102._002100.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/2/
[2026-05-28 05:55:24] 2026-05-28 03:54:33,472 | INFO     | adding to output.list: log.49545102._002100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/f9/log.49545102._002100.job.log.tg
[2026-05-28 05:55:24] 2026-05-28 03:54:33,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-28 05:55:24] 2026-05-28 03:54:33,473 | INFO     | summary of transferred files:
[2026-05-28 05:55:24] 2026-05-28 03:54:33,473 | INFO     |  -- lfn=log.49545102._002100.job.log.tgz.1, status_code=0, status=transferred
[2026-05-28 05:55:24] 2026-05-28 03:54:33,473 | INFO     | stage-out finished correctly
[2026-05-28 05:55:24] 2026-05-28 03:54:33,523 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 05:55:24] 2026-05-28 03:54:33,941 | INFO     | job 7155170840 has state=finished
[2026-05-28 05:55:24] 2026-05-28 03:54:33,942 | INFO     | preparing for final server update for job 7155170840 in state='finished'
[2026-05-28 05:55:24] 2026-05-28 03:54:34,504 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,504 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/2/PanDA_Pilot-7155170840/jobReport.json
[2026-05-28 05:55:24] 2026-05-28 03:54:34,506 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/2/workernode_map.json
[2026-05-28 05:55:24] 2026-05-28 03:54:34,506 | INFO     | this job has now completed (state=finished)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,506 | INFO     | log transfer has been attempted: DONE
[2026-05-28 05:55:24] 2026-05-28 03:54:34,506 | INFO     | job 7155170840 has finished - writing final server update
[2026-05-28 05:55:24] 2026-05-28 03:54:34,507 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1982383/.job.ad'
[2026-05-28 05:55:24] 2026-05-28 03:54:34,507 | INFO     | total number of processed events: 400 (read)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,523 | INFO     | using path: /var/lib/boinc/var/slot108/slots/2/PanDA_Pilot-7155170840/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | INFO     | extracted standard info from prmon json
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | INFO     | fitting pss+swap vs Time
[2026-05-28 05:55:24] 2026-05-28 03:54:34,524 | INFO     | sum of square deviations: 1041880.0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | sum of deviations: 24509983.000000004
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | mean x (centered): 0.0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | mean y: 2757398.6
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | intersect: 2757398.6
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | chi2: 4.526924516483906e-05
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | current memory leak: 23.52 B/s (using 15 data points, chi2=0.00)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,525 | INFO     | could have reported an average CPU frequency of 3636 MHz (4 samples)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | ..............................
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . Timing measurements:
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . get job = 0 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . initial setup = 3 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . payload setup = 5 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . stage-in = 0 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . payload execution = 1315 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . stage-out = 0 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | . log creation = 0 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,526 | INFO     | ..............................
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | 
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | job summary report
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | --------------------------------------------------
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | PanDA job id: 7155170840
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | task id: 49545102
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | errors: (none)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | pilot state: finished 
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | transexitcode: 0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | exeerrorcode: 0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | exeerrordiag: 
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | exitcode: 0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | exitmsg: OK
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | cpuconsumptiontime: 14088 s
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | nevents: 400
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | neventsw: 0
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | pid: 2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | pgrp: 2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:34,571 | INFO     | corecount: 12
[2026-05-28 05:55:24] 2026-05-28 03:54:34,572 | INFO     | event service: False
[2026-05-28 05:55:24] 2026-05-28 03:54:34,572 | INFO     | sizes: {0: 2267645, 10: 2267645, 1323: 2292301, 1324: 2301379, 1325: 2301517}
[2026-05-28 05:55:24] 2026-05-28 03:54:34,572 | INFO     | --------------------------------------------------
[2026-05-28 05:55:24] 2026-05-28 03:54:34,572 | INFO     | 
[2026-05-28 05:55:24] 2026-05-28 03:54:34,572 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/2
[2026-05-28 05:55:24] 2026-05-28 03:54:34,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | job 7155170840 has completed (purged errors)
[2026-05-28 05:55:24] 2026-05-28 03:54:34,589 | INFO     | overall cleanup function is called
[2026-05-28 05:55:24] 2026-05-28 03:54:35,596 | INFO     | --- collectZombieJob: --- 10, [2267376]
[2026-05-28 05:55:24] 2026-05-28 03:54:35,597 | INFO     | zombie collector waiting for pid 2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:35,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 05:55:24] 2026-05-28 03:54:35,597 | INFO     | collected zombie processes
[2026-05-28 05:55:24] 2026-05-28 03:54:35,597 | INFO     | will attempt to kill all subprocesses of pid=2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:35,867 | INFO     | process IDs to be killed: [2267376] (in reverse order)
[2026-05-28 05:55:24] 2026-05-28 03:54:36,010 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 05:55:24] 2026-05-28 03:54:36,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 05:55:24] 2026-05-28 03:54:36,031 | INFO     | did not find any defunct processes belonging to 2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:36,051 | INFO     | did not find any defunct processes belonging to 2267376
[2026-05-28 05:55:24] 2026-05-28 03:54:36,051 | INFO     | Ready for new job
[2026-05-28 05:55:24] 2026-05-28 03:54:36,052 | INFO     | ***************************************
[2026-05-28 05:55:24] 2026-05-28 03:54:36,052 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 05:55:24] 2026-05-28 03:54:36,052 | INFO     | ***************************************
[2026-05-28 05:55:24] 2026-05-28 03:54:36,052 | INFO     | 
[2026-05-28 05:55:24] 2026-05-28 03:54:36,057 | INFO     | architecture information:
[2026-05-28 05:55:24] 2026-05-28 03:54:36,057 | INFO     | executing command: cat /etc/os-release
[2026-05-28 05:55:24] 2026-05-28 03:54:36,071 | INFO     | cat /etc/os-release:
[2026-05-28 05:55:24] NAME="CentOS Linux"
[2026-05-28 05:55:24] VERSION="7 (Core)"
[2026-05-28 05:55:24] ID="centos"
[2026-05-28 05:55:24] ID_LIKE="rhel fedora"
[2026-05-28 05:55:24] VERSION_ID="7"
[2026-05-28 05:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 05:55:24] ANSI_COLOR="0;31"
[2026-05-28 05:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 05:55:24] HOME_URL="https://www.centos.org/"
[2026-05-28 05:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 05:55:24] 
[2026-05-28 05:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 05:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 05:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 05:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 05:55:24] 
[2026-05-28 05:55:24] 2026-05-28 03:54:36,072 | INFO     | ***************************************
[2026-05-28 05:55:24] 2026-05-28 03:54:36,575 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/2
[2026-05-28 05:55:24] 2026-05-28 03:54:36,595 | INFO     | sufficient remaining disk space (328206385152 B)
[2026-05-28 05:55:24] 2026-05-28 03:54:36,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 05:55:24] 2026-05-28 03:54:36,595 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 05:55:24] 2026-05-28 03:54:36,596 | INFO     | update_server=False
[2026-05-28 05:55:24] 2026-05-28 03:54:36,596 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 05:55:24] 2026-05-28 03:54:36,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 05:55:24] 2026-05-28 03:54:37,267 | INFO     | all data control threads have been joined
[2026-05-28 05:55:24] 2026-05-28 03:54:37,501 | INFO     | all job control threads have been joined
[2026-05-28 05:55:24] 2026-05-28 03:54:37,601 | INFO     | [job] retrieve thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:37,768 | INFO     | all payload control threads have been joined
[2026-05-28 05:55:24] 2026-05-28 03:54:37,935 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:37,963 | INFO     | [job] validate thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,025 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,136 | INFO     | [data] copytool_in thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,233 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,272 | INFO     | [data] control thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,506 | INFO     | [job] control thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,571 | INFO     | [payload] validate_post thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,601 | INFO     | [data] copytool_out thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,734 | INFO     | [payload] failed_post thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,774 | INFO     | [payload] control thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:38,933 | WARNING  | process 2267376 can no longer be monitored (due to stat problems) - aborting
[2026-05-28 05:55:24] 2026-05-28 03:54:39,187 | INFO     | using path: /var/lib/boinc/var/slot108/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 05:55:24] 2026-05-28 03:54:39,356 | INFO     | job.realtimelogging is not enabled
[2026-05-28 05:55:24] 2026-05-28 03:54:39,460 | INFO     | number of running child processes to parent process 2267376: 1
[2026-05-28 05:55:24] 2026-05-28 03:54:39,460 | INFO     | maximum number of monitored processes: 6
[2026-05-28 05:55:24] 2026-05-28 03:54:39,461 | INFO     | aborting job monitoring since job object (job id=7155170840) has expired
[2026-05-28 05:55:24] 2026-05-28 03:54:39,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 05:55:24] 2026-05-28 03:54:39,461 | INFO     | will abort loop
[2026-05-28 05:55:24] 2026-05-28 03:54:39,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 05:55:24] 2026-05-28 03:54:39,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 05:55:24] 2026-05-28 03:54:40,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:40,466 | INFO     | [job] job monitor thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:40,592 | INFO     | [job] queue monitor thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:54:43,582 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 05:55:24] 2026-05-28 03:55:07,936 | INFO     | PID=2261641 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 05:55:24] 2026-05-28 03:55:07,936 | INFO     | .. there are 12 such processes running
[2026-05-28 05:55:24] 2026-05-28 03:55:07,938 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 05:55:24] 2026-05-28 03:55:07,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 05:55:24] 2026-05-28 03:55:07,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 05:55:24] 2026-05-28 03:55:19,312 | INFO     | [monitor] cgroup control has ended
[2026-05-28 05:55:24] 2026-05-28 03:55:19,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22850272900928)>', '<ExcThread(monitor, started 22850038941440)>']
[2026-05-28 05:55:24] 2026-05-28 03:55:19,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 05:55:24] 2026-05-28 03:55:19,995 | INFO     | [monitor] control thread has ended
[2026-05-28 05:55:24] 2026-05-28 03:55:24,346 | INFO     | all workflow threads have been joined
[2026-05-28 05:55:24] 2026-05-28 03:55:24,346 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 05:55:24] 2026-05-28 03:55:24,346 | INFO     | traces error code: 0
[2026-05-28 05:55:24] 2026-05-28 03:55:24,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 05:55:24] 2026-05-28 03:55:24,450 [wrapper] ==== pilot stdout END ====
[2026-05-28 05:55:24] 2026-05-28 03:55:24,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 05:55:24] 2026-05-28 03:55:24,455 [wrapper] pilotpid: 2261641
[2026-05-28 05:55:24] 2026-05-28 03:55:24,457 [wrapper] Pilot exit status: 0
[2026-05-28 05:55:24] 2026-05-28 03:55:24,465 [wrapper] pandaids: 7155170840
[2026-05-28 05:55:24] 2026-05-28 03:55:24,570 [wrapper] cleanup supervisor_pilot 2441550 2261642
[2026-05-28 05:55:24] 2026-05-28 03:55:24,573 [wrapper] Test setup, not cleaning
[2026-05-28 05:55:24] 2026-05-28 03:55:24,576 [wrapper] apfmon messages muted
[2026-05-28 05:55:24] 2026-05-28 03:55:24,578 [wrapper] ==== wrapper stdout END ====
[2026-05-28 05:55:24] 2026-05-28 03:55:24,580 [wrapper] ==== wrapper stderr END ====
[2026-05-28 05:55:24]  *** Error codes and diagnostics ***
[2026-05-28 05:55:24]     "exeErrorCode": 0,
[2026-05-28 05:55:24]     "pilotErrorCode": 0,
[2026-05-28 05:55:24]  *** Listing of results directory ***
[2026-05-28 05:55:24] total 430196
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc    709501 May 28 01:08 pilot3.tar.gz
[2026-05-28 05:55:24] -rwx------. 1 boinc boinc     36281 May 28 01:09 runpilot2-wrapper.sh
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc      5631 May 28 01:10 queuedata.json
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc       100 May 28 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 05:55:24] -rwxr-xr-x. 1 boinc boinc      7986 May 28 05:32 run_atlas
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc       105 May 28 05:32 job.xml
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc     15667 May 28 05:32 start_atlas.sh
[2026-05-28 05:55:24] drwxrwx--x. 2 boinc boinc      4096 May 28 05:32 shared
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc    722745 May 28 05:32 input.tar.gz
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc      6630 May 28 05:32 init_data.xml
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc 261769586 May 28 05:32 EVNT.49539563._000013.pool.root.1
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc         0 May 28 05:32 boinc_lockfile
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc      2565 May 28 05:32 pandaJob.out
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc    996455 May 28 05:32 agis_schedconf.cvmfs.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc         0 May 28 05:32 agis_ddmendpoints.agis.ALL.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc   1251485 May 28 05:32 cric_ddmendpoints.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc       442 May 28 05:32 workernode_map.json
[2026-05-28 05:55:24] drwx------. 5 boinc boinc      4096 May 28 05:32 pilot3
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc 173810143 May 28 05:54 HITS.49545102._002100.pool.root.1
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc       487 May 28 05:54 boinc_task_state.xml
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc      1022 May 28 05:54 memory_monitor_summary.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc    324914 May 28 05:54 log.49545102._002100.job.log.tgz.1
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc      6411 May 28 05:54 heartbeat_new.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc      6302 May 28 05:54 heartbeat.json
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc        95 May 28 05:55 pilot_heartbeat.json
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc      8192 May 28 05:55 boinc_mmap_file
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc        27 May 28 05:55 wrapper_checkpoint.txt
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc      5439 May 28 05:55 pilotlog.txt
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc    176425 May 28 05:55 log.49545102._002100.job.log.1
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc       357 May 28 05:55 output.list
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc       410 May 28 05:55 runtime_log
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc    522240 May 28 05:55 result.tar.gz
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc      8846 May 28 05:55 runtime_log.err
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc       657 May 28 05:55 79a298184fa9.diag
[2026-05-28 05:55:24] -rw-r--r--. 1 boinc boinc     21170 May 28 05:55 stderr.txt
[2026-05-28 05:55:24] HITS file was successfully produced:
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc 173810143 May 28 05:54 shared/HITS.pool.root.1
[2026-05-28 05:55:24]  *** Contents of shared directory: ***
[2026-05-28 05:55:24] total 426620
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc     15667 May 28 05:32 start_atlas.sh
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc    722745 May 28 05:32 input.tar.gz
[2026-05-28 05:55:24] -rw-r--r--. 2 boinc boinc 261769586 May 28 05:32 ATLAS.root_0
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc 173810143 May 28 05:54 HITS.pool.root.1
[2026-05-28 05:55:24] -rw-------. 1 boinc boinc    522240 May 28 05:55 result.tar.gz
05:55:25 (2256879): run_atlas exited; CPU time 14115.072922
05:55:25 (2256879): called boinc_finish(0)

</stderr_txt>
]]>

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