Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:48 (1092494): wrapper (7.7.26015): starting
07:04:48 (1092494): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 07:04:48] Arguments: --nthreads 4
[2026-05-28 07:04:48] Threads: 4
[2026-05-28 07:04:48] Checking for CVMFS
[2026-05-28 07:04:48] No cvmfs_config command found, will try listing directly
[2026-05-28 07:04:48] CVMFS is ok
[2026-05-28 07:04:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 07:04:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 07:04:48] Further information can be found at the LHC@home message board.
[2026-05-28 07:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 07:04:48] Checking for apptainer binary...
[2026-05-28 07:04:48] which: no apptainer in ((null))
[2026-05-28 07:04:48] apptainer is not installed, using version from CVMFS
[2026-05-28 07:04:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 07:04:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-28 07:04:48] apptainer works
[2026-05-28 07:04:48] Set ATHENA_PROC_NUMBER=4
[2026-05-28 07:04:48] Set ATHENA_CORE_NUMBER=4
[2026-05-28 07:04:48] Starting ATLAS job with PandaID=7155300627
[2026-05-28 07:04:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 09:54:26]  *** The last 200 lines of the pilot log: ***
[2026-05-28 09:54:26] 2026-05-28 07:53:43,662 | INFO     | job 7155300627 has finished - writing final server update
[2026-05-28 09:54:26] 2026-05-28 07:53:43,662 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1219202/.job.ad'
[2026-05-28 09:54:26] 2026-05-28 07:53:43,662 | INFO     | total number of processed events: 400 (read)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,675 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7155300627/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,675 | INFO     | extracted standard info from prmon json
[2026-05-28 09:54:26] 2026-05-28 07:53:43,676 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 09:54:26] 2026-05-28 07:53:43,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 09:54:26] 2026-05-28 07:53:43,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 09:54:26] 2026-05-28 07:53:43,679 | INFO     | fitting pss+swap vs Time
[2026-05-28 09:54:26] 2026-05-28 07:53:43,680 | INFO     | sum of square deviations: 1418361477.5
[2026-05-28 09:54:26] 2026-05-28 07:53:43,680 | INFO     | sum of deviations: 17330240757.5
[2026-05-28 09:54:26] 2026-05-28 07:53:43,681 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,681 | INFO     | mean y: 2299418.5843373495
[2026-05-28 09:54:26] 2026-05-28 07:53:43,681 | INFO     | intersect: 2299418.5843373495
[2026-05-28 09:54:26] 2026-05-28 07:53:43,681 | INFO     | chi2: 2.187722999233688
[2026-05-28 09:54:26] 2026-05-28 07:53:43,681 | INFO     | sum of square deviations: 1294014960.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,682 | INFO     | sum of deviations: 26837634114.999996
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | mean y: 2310767.0931677017
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | intersect: 2310767.0931677017
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | chi2: 1.3952578644912619
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | current chi2=1.3952578644912619 (change=36.22328489575735 %)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,683 | INFO     | sum of square deviations: 1177156955.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,684 | INFO     | sum of deviations: 25734416967.999996
[2026-05-28 09:54:26] 2026-05-28 07:53:43,684 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | mean y: 2309327.0897435895
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | intersect: 2309327.0897435895
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | chi2: 1.396172776063537
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | current chi2=1.396172776063537 (change=-0.06557293784605711 %)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | right removable region: 155
[2026-05-28 09:54:26] 2026-05-28 07:53:43,685 | INFO     | sum of square deviations: 1294014960.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,686 | INFO     | sum of deviations: -5469913492.999999
[2026-05-28 09:54:26] 2026-05-28 07:53:43,686 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,687 | INFO     | mean y: 2326991.136645963
[2026-05-28 09:54:26] 2026-05-28 07:53:43,687 | INFO     | intersect: 2326991.136645963
[2026-05-28 09:54:26] 2026-05-28 07:53:43,687 | INFO     | chi2: 0.8169475554655976
[2026-05-28 09:54:26] 2026-05-28 07:53:43,687 | INFO     | current chi2=0.8169475554655976 (change=62.657632810380626 %)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,687 | INFO     | sum of square deviations: 1177156955.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,688 | INFO     | sum of deviations: -5596982562.499999
[2026-05-28 09:54:26] 2026-05-28 07:53:43,688 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,688 | INFO     | mean y: 2327164.3525641025
[2026-05-28 09:54:26] 2026-05-28 07:53:43,689 | INFO     | intersect: 2327164.3525641025
[2026-05-28 09:54:26] 2026-05-28 07:53:43,689 | INFO     | chi2: 0.8170042569173602
[2026-05-28 09:54:26] 2026-05-28 07:53:43,689 | INFO     | current chi2=0.8170042569173602 (change=-0.00694064770538473 %)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,689 | INFO     | left removable region: 10
[2026-05-28 09:54:26] 2026-05-28 07:53:43,689 | INFO     | sum of square deviations: 945282840.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,690 | INFO     | sum of deviations: 3583800630.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,690 | INFO     | mean x (centered): 0.0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,690 | INFO     | mean y: 2339540.268965517
[2026-05-28 09:54:26] 2026-05-28 07:53:43,690 | INFO     | intersect: 2339540.268965517
[2026-05-28 09:54:26] 2026-05-28 07:53:43,691 | INFO     | chi2: 0.00037386897197614954
[2026-05-28 09:54:26] 2026-05-28 07:53:43,691 | INFO     | current memory leak: 3.79 B/s (using 145 data points, chi2=0.00)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,691 | INFO     | could have reported an average CPU frequency of 2491 MHz (9 samples)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | ..............................
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . Timing measurements:
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . get job = 0 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . initial setup = 5 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . payload setup = 9 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . stage-in = 0 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . payload execution = 10090 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,692 | INFO     | . stage-out = 0 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,693 | INFO     | . log creation = 0 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,693 | INFO     | ..............................
[2026-05-28 09:54:26] 2026-05-28 07:53:43,786 | INFO     | 
[2026-05-28 09:54:26] 2026-05-28 07:53:43,786 | INFO     | job summary report
[2026-05-28 09:54:26] 2026-05-28 07:53:43,786 | INFO     | --------------------------------------------------
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | PanDA job id: 7155300627
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | task id: 49545102
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | errors: (none)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | pilot state: finished 
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | transexitcode: 0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | exeerrorcode: 0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | exeerrordiag: 
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | exitcode: 0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | exitmsg: OK
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | cpuconsumptiontime: 38577 s
[2026-05-28 09:54:26] 2026-05-28 07:53:43,787 | INFO     | nevents: 400
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | neventsw: 0
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | pid: 1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | pgrp: 1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | corecount: 4
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | event service: False
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | sizes: {0: 2266015, 1: 2267645, 11: 2267673, 10104: 2296223, 10106: 2305271, 10108: 2305713}
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | --------------------------------------------------
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | 
[2026-05-28 09:54:26] 2026-05-28 07:53:43,788 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-05-28 09:54:26] 2026-05-28 07:53:43,809 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,809 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,809 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | job 7155300627 has completed (purged errors)
[2026-05-28 09:54:26] 2026-05-28 07:53:43,811 | INFO     | overall cleanup function is called
[2026-05-28 09:54:26] 2026-05-28 07:53:44,819 | INFO     | --- collectZombieJob: --- 10, [1101379]
[2026-05-28 09:54:26] 2026-05-28 07:53:44,819 | INFO     | zombie collector waiting for pid 1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:44,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 09:54:26] 2026-05-28 07:53:44,819 | INFO     | collected zombie processes
[2026-05-28 09:54:26] 2026-05-28 07:53:44,819 | INFO     | will attempt to kill all subprocesses of pid=1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:45,134 | INFO     | process IDs to be killed: [1101379] (in reverse order)
[2026-05-28 09:54:26] 2026-05-28 07:53:45,261 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 09:54:26] 2026-05-28 07:53:45,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 09:54:26] 2026-05-28 07:53:45,273 | INFO     | did not find any defunct processes belonging to 1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:45,285 | INFO     | did not find any defunct processes belonging to 1101379
[2026-05-28 09:54:26] 2026-05-28 07:53:45,285 | INFO     | Ready for new job
[2026-05-28 09:54:26] 2026-05-28 07:53:45,287 | INFO     | ***************************************
[2026-05-28 09:54:26] 2026-05-28 07:53:45,288 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 09:54:26] 2026-05-28 07:53:45,288 | INFO     | ***************************************
[2026-05-28 09:54:26] 2026-05-28 07:53:45,288 | INFO     | 
[2026-05-28 09:54:26] 2026-05-28 07:53:45,292 | INFO     | architecture information:
[2026-05-28 09:54:26] 2026-05-28 07:53:45,292 | INFO     | executing command: cat /etc/os-release
[2026-05-28 09:54:26] 2026-05-28 07:53:45,306 | INFO     | cat /etc/os-release:
[2026-05-28 09:54:26] NAME="CentOS Linux"
[2026-05-28 09:54:26] VERSION="7 (Core)"
[2026-05-28 09:54:26] ID="centos"
[2026-05-28 09:54:26] ID_LIKE="rhel fedora"
[2026-05-28 09:54:26] VERSION_ID="7"
[2026-05-28 09:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 09:54:26] ANSI_COLOR="0;31"
[2026-05-28 09:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 09:54:26] HOME_URL="https://www.centos.org/"
[2026-05-28 09:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 09:54:26] 
[2026-05-28 09:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 09:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 09:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 09:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 09:54:26] 
[2026-05-28 09:54:26] 2026-05-28 07:53:45,307 | INFO     | ***************************************
[2026-05-28 09:54:26] 2026-05-28 07:53:45,808 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-05-28 09:54:26] 2026-05-28 07:53:45,823 | INFO     | sufficient remaining disk space (63728254976 B)
[2026-05-28 09:54:26] 2026-05-28 07:53:45,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 09:54:26] 2026-05-28 07:53:45,824 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 09:54:26] 2026-05-28 07:53:45,824 | INFO     | update_server=False
[2026-05-28 09:54:26] 2026-05-28 07:53:45,824 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 09:54:26] 2026-05-28 07:53:45,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 09:54:26] 2026-05-28 07:53:45,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 09:54:26] 2026-05-28 07:53:45,865 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-28 09:54:26] 2026-05-28 07:53:45,865 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-28 09:54:26] 2026-05-28 07:53:45,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 09:54:26] 2026-05-28 07:53:45,865 | INFO     | will abort loop
[2026-05-28 09:54:26] 2026-05-28 07:53:45,876 | INFO     | all payload control threads have been joined
[2026-05-28 09:54:26] 2026-05-28 07:53:46,133 | INFO     | all job control threads have been joined
[2026-05-28 09:54:26] 2026-05-28 07:53:46,483 | INFO     | job.realtimelogging is not enabled
[2026-05-28 09:54:26] 2026-05-28 07:53:46,744 | INFO     | all data control threads have been joined
[2026-05-28 09:54:26] 2026-05-28 07:53:46,829 | INFO     | [job] retrieve thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:46,870 | INFO     | [job] job monitor thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:46,883 | INFO     | [payload] control thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:46,955 | INFO     | [data] copytool_in thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:46,959 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,139 | INFO     | [job] control thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,194 | INFO     | [payload] failed_post thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,223 | INFO     | [job] validate thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,488 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,501 | INFO     | [payload] validate_post thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,748 | INFO     | [data] control thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,797 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:47,830 | INFO     | [data] copytool_out thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:48,298 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:48,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 09:54:26] 2026-05-28 07:53:49,802 | INFO     | [job] queue monitor thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:53:49,827 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 09:54:26] 2026-05-28 07:54:16,625 | INFO     | PID=1096278 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 09:54:26] 2026-05-28 07:54:16,627 | INFO     | .. there are 12 such processes running
[2026-05-28 09:54:26] 2026-05-28 07:54:16,628 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 09:54:26] 2026-05-28 07:54:16,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 09:54:26] 2026-05-28 07:54:16,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 09:54:26] 2026-05-28 07:54:21,043 | INFO     | [monitor] cgroup control has ended
[2026-05-28 09:54:26] 2026-05-28 07:54:21,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22678531626816)>', '<ExcThread(monitor, started 22678230525696)>']
[2026-05-28 09:54:26] 2026-05-28 07:54:21,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 09:54:26] 2026-05-28 07:54:21,650 | INFO     | [monitor] control thread has ended
[2026-05-28 09:54:26] 2026-05-28 07:54:26,359 | INFO     | all workflow threads have been joined
[2026-05-28 09:54:26] 2026-05-28 07:54:26,359 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 09:54:26] 2026-05-28 07:54:26,360 | INFO     | traces error code: 0
[2026-05-28 09:54:26] 2026-05-28 07:54:26,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 09:54:26] 2026-05-28 07:54:26,515 [wrapper] ==== pilot stdout END ====
[2026-05-28 09:54:26] 2026-05-28 07:54:26,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 09:54:26] 2026-05-28 07:54:26,520 [wrapper] pilotpid: 1096278
[2026-05-28 09:54:26] 2026-05-28 07:54:26,522 [wrapper] Pilot exit status: 0
[2026-05-28 09:54:26] 2026-05-28 07:54:26,533 [wrapper] pandaids: 7155300627
[2026-05-28 09:54:26] 2026-05-28 07:54:26,613 [wrapper] cleanup supervisor_pilot 1322531 1096279
[2026-05-28 09:54:26] 2026-05-28 07:54:26,616 [wrapper] Test setup, not cleaning
[2026-05-28 09:54:26] 2026-05-28 07:54:26,619 [wrapper] apfmon messages muted
[2026-05-28 09:54:26] 2026-05-28 07:54:26,621 [wrapper] ==== wrapper stdout END ====
[2026-05-28 09:54:26] 2026-05-28 07:54:26,624 [wrapper] ==== wrapper stderr END ====
[2026-05-28 09:54:26]  *** Error codes and diagnostics ***
[2026-05-28 09:54:26]     "exeErrorCode": 0,
[2026-05-28 09:54:26]     "pilotErrorCode": 0,
[2026-05-28 09:54:26]  *** Listing of results directory ***
[2026-05-28 09:54:26] total 437944
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc    709501 May 28 03:07 pilot3.tar.gz
[2026-05-28 09:54:26] -rwx------. 1 boinc boinc     36281 May 28 03:11 runpilot2-wrapper.sh
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc      5631 May 28 03:13 queuedata.json
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc       100 May 28 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 09:54:26] -rwxr-xr-x. 1 boinc boinc      7986 May 28 07:04 run_atlas
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc       105 May 28 07:04 job.xml
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc 268884397 May 28 07:04 EVNT.49539563._000059.pool.root.1
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc      6482 May 28 07:04 init_data.xml
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc     15667 May 28 07:04 start_atlas.sh
[2026-05-28 09:54:26] drwxrwx--x. 2 boinc boinc      4096 May 28 07:04 shared
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc    722745 May 28 07:04 input.tar.gz
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc         0 May 28 07:04 boinc_lockfile
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc      2566 May 28 07:04 pandaJob.out
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc    996439 May 28 07:04 agis_schedconf.cvmfs.json
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc         0 May 28 07:04 agis_ddmendpoints.agis.ALL.json
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc   1251485 May 28 07:04 cric_ddmendpoints.json
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc       451 May 28 07:05 workernode_map.json
[2026-05-28 09:54:26] drwx------. 5 boinc boinc      4096 May 28 07:05 pilot3
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc 173133551 May 28 09:53 HITS.49545102._003249.pool.root.1
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc        95 May 28 09:53 pilot_heartbeat.json
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc      1033 May 28 09:53 memory_monitor_summary.json
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc       488 May 28 09:53 boinc_task_state.xml
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc    291398 May 28 09:53 log.49545102._003249.job.log.tgz.1
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc      6463 May 28 09:53 heartbeat_new.json
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc      6354 May 28 09:53 heartbeat.json
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc      8192 May 28 09:54 boinc_mmap_file
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc        28 May 28 09:54 wrapper_checkpoint.txt
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc      5090 May 28 09:54 pilotlog.txt
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc    962866 May 28 09:54 log.49545102._003249.job.log.1
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc       357 May 28 09:54 output.list
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc       410 May 28 09:54 runtime_log
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc   1269760 May 28 09:54 result.tar.gz
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc      8828 May 28 09:54 runtime_log.err
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc       665 May 28 09:54 96251b459b97.diag
[2026-05-28 09:54:26] -rw-r--r--. 1 boinc boinc     20810 May 28 09:54 stderr.txt
[2026-05-28 09:54:26] HITS file was successfully produced:
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc 173133551 May 28 09:53 shared/HITS.pool.root.1
[2026-05-28 09:54:26]  *** Contents of shared directory: ***
[2026-05-28 09:54:26] total 433632
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc 268884397 May 28 07:04 ATLAS.root_0
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc     15667 May 28 07:04 start_atlas.sh
[2026-05-28 09:54:26] -rw-r--r--. 2 boinc boinc    722745 May 28 07:04 input.tar.gz
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc 173133551 May 28 09:53 HITS.pool.root.1
[2026-05-28 09:54:26] -rw-------. 1 boinc boinc   1269760 May 28 09:54 result.tar.gz
09:54:28 (1092494): run_atlas exited; CPU time 38942.820611
09:54:28 (1092494): called boinc_finish(0)

</stderr_txt>
]]>

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