Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:21:22 (3125037): wrapper (7.7.26015): starting
03:21:22 (3125037): wrapper: running run_atlas (--nthreads 12)
[2026-05-28 03:21:22] Arguments: --nthreads 12
[2026-05-28 03:21:22] Threads: 12
[2026-05-28 03:21:22] Checking for CVMFS
[2026-05-28 03:21:22] No cvmfs_config command found, will try listing directly
[2026-05-28 03:21:22] CVMFS is ok
[2026-05-28 03:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 03:21:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 03:21:22] Further information can be found at the LHC@home message board.
[2026-05-28 03:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 03:21:22] Checking for apptainer binary...
[2026-05-28 03:21:22] which: no apptainer in ((null))
[2026-05-28 03:21:22] apptainer is not installed, using version from CVMFS
[2026-05-28 03:21:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 03:21:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-28 03:21:22] apptainer works
[2026-05-28 03:21:22] Set ATHENA_PROC_NUMBER=12
[2026-05-28 03:21:22] Set ATHENA_CORE_NUMBER=12
[2026-05-28 03:21:22] Starting ATLAS job with PandaID=7155081656
[2026-05-28 03:21:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 03:44:39]  *** The last 200 lines of the pilot log: ***
[2026-05-28 03:44:39]  filesize=334523
[2026-05-28 03:44:39]  filetype=log
[2026-05-28 03:44:39]  guid=308a3fe4-5281-4338-9f50-636c81041149
[2026-05-28 03:44:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-28 03:44:39]  is_altstaged=None
[2026-05-28 03:44:39]  is_tar=False
[2026-05-28 03:44:39]  lfn=log.49545130._017059.job.log.tgz.1
[2026-05-28 03:44:39]  mtime=0
[2026-05-28 03:44:39]  protocol_id=None
[2026-05-28 03:44:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-28 03:44:39]  replicas=None
[2026-05-28 03:44:39]  scope=mc23_13p6TeV
[2026-05-28 03:44:39]  status=None
[2026-05-28 03:44:39]  status_code=0
[2026-05-28 03:44:39]  storage_token=
[2026-05-28 03:44:39]  surl=/var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7155081656/log.49545130._017059.job.log.tgz.1
[2026-05-28 03:44:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/68/log.49545130._017059.job.log.tgz.1
[2026-05-28 03:44:39]  workdir=None
[2026-05-28 03:44:39] ]
[2026-05-28 03:44:39] 2026-05-28 01:43:38,919 | INFO     | transferring file log.49545130._017059.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7155081656/log.49545130._017059.job.log.tgz.1 to /var/lib/
[2026-05-28 03:44:39] 2026-05-28 01:43:38,919 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7155081656/log.49545130._017059.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/30/
[2026-05-28 03:44:39] 2026-05-28 01:43:38,928 | INFO     | adding to output.list: log.49545130._017059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/68/log.49545130._017059.job.log.tg
[2026-05-28 03:44:39] 2026-05-28 01:43:38,928 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-28 03:44:39] 2026-05-28 01:43:38,928 | INFO     | summary of transferred files:
[2026-05-28 03:44:39] 2026-05-28 01:43:38,928 | INFO     |  -- lfn=log.49545130._017059.job.log.tgz.1, status_code=0, status=transferred
[2026-05-28 03:44:39] 2026-05-28 01:43:38,928 | INFO     | stage-out finished correctly
[2026-05-28 03:44:39] 2026-05-28 01:43:39,877 | INFO     | monitor loop #104: job 0:7155081656 is in state 'finished'
[2026-05-28 03:44:39] 2026-05-28 01:43:39,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 03:44:39] 2026-05-28 01:43:41,576 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 03:44:39] 2026-05-28 01:43:42,380 | INFO     | monitor loop #105: job 0:7155081656 is in state 'finished'
[2026-05-28 03:44:39] 2026-05-28 01:43:42,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,203 | INFO     | job 7155081656 has state=finished
[2026-05-28 03:44:39] 2026-05-28 01:43:43,203 | INFO     | preparing for final server update for job 7155081656 in state='finished'
[2026-05-28 03:44:39] 2026-05-28 01:43:43,204 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7155081656/jobReport.json
[2026-05-28 03:44:39] 2026-05-28 01:43:43,205 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/30/workernode_map.json
[2026-05-28 03:44:39] 2026-05-28 01:43:43,205 | INFO     | this job has now completed (state=finished)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,205 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,205 | INFO     | log transfer has been attempted: DONE
[2026-05-28 03:44:39] 2026-05-28 01:43:43,205 | INFO     | job 7155081656 has finished - writing final server update
[2026-05-28 03:44:39] 2026-05-28 01:43:43,206 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2313578/.job.ad'
[2026-05-28 03:44:39] 2026-05-28 01:43:43,206 | INFO     | total number of processed events: 400 (read)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,221 | INFO     | using path: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7155081656/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,221 | INFO     | extracted standard info from prmon json
[2026-05-28 03:44:39] 2026-05-28 01:43:43,221 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 03:44:39] 2026-05-28 01:43:43,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 03:44:39] 2026-05-28 01:43:43,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | fitting pss+swap vs Time
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | sum of square deviations: 1041880.0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | sum of deviations: -52006709.0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | mean x (centered): 0.0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | mean y: 2858923.1333333333
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | intersect: 2858923.1333333333
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | chi2: 0.0005304428283816079
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | current memory leak: -49.92 B/s (using 15 data points, chi2=0.00)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,222 | INFO     | could have reported an average CPU frequency of 3633 MHz (4 samples)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | ..............................
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . Timing measurements:
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . get job = 0 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . initial setup = 3 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . payload setup = 4 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . stage-in = 0 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . payload execution = 1307 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . stage-out = 0 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | . log creation = 0 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,223 | INFO     | ..............................
[2026-05-28 03:44:39] 2026-05-28 01:43:43,254 | INFO     | 
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | job summary report
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | --------------------------------------------------
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | PanDA job id: 7155081656
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | task id: 49545130
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | errors: (none)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | pilot state: finished 
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | transexitcode: 0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | exeerrorcode: 0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | exeerrordiag: 
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | exitcode: 0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | exitmsg: OK
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | cpuconsumptiontime: 13533 s
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | nevents: 400
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | neventsw: 0
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | pid: 3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | pgrp: 3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | corecount: 12
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | event service: False
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | sizes: {0: 2267701, 11: 2267701, 1315: 2292371, 1317: 2301393, 1319: 2301449, 1321: 2301643}
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | --------------------------------------------------
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | 
[2026-05-28 03:44:39] 2026-05-28 01:43:43,255 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/30
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | job 7155081656 has completed (purged errors)
[2026-05-28 03:44:39] 2026-05-28 01:43:43,270 | INFO     | overall cleanup function is called
[2026-05-28 03:44:39] 2026-05-28 01:43:44,277 | INFO     | --- collectZombieJob: --- 10, [3136153]
[2026-05-28 03:44:39] 2026-05-28 01:43:44,277 | INFO     | zombie collector waiting for pid 3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:44,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 03:44:39] 2026-05-28 01:43:44,277 | INFO     | collected zombie processes
[2026-05-28 03:44:39] 2026-05-28 01:43:44,277 | INFO     | will attempt to kill all subprocesses of pid=3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:44,437 | INFO     | process IDs to be killed: [3136153] (in reverse order)
[2026-05-28 03:44:39] 2026-05-28 01:43:44,522 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 03:44:39] 2026-05-28 01:43:44,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 03:44:39] 2026-05-28 01:43:44,539 | INFO     | did not find any defunct processes belonging to 3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:44,551 | INFO     | did not find any defunct processes belonging to 3136153
[2026-05-28 03:44:39] 2026-05-28 01:43:44,551 | INFO     | Ready for new job
[2026-05-28 03:44:39] 2026-05-28 01:43:44,552 | INFO     | ***************************************
[2026-05-28 03:44:39] 2026-05-28 01:43:44,552 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 03:44:39] 2026-05-28 01:43:44,552 | INFO     | ***************************************
[2026-05-28 03:44:39] 2026-05-28 01:43:44,552 | INFO     | 
[2026-05-28 03:44:39] 2026-05-28 01:43:44,555 | INFO     | architecture information:
[2026-05-28 03:44:39] 2026-05-28 01:43:44,555 | INFO     | executing command: cat /etc/os-release
[2026-05-28 03:44:39] 2026-05-28 01:43:44,563 | INFO     | cat /etc/os-release:
[2026-05-28 03:44:39] NAME="CentOS Linux"
[2026-05-28 03:44:39] VERSION="7 (Core)"
[2026-05-28 03:44:39] ID="centos"
[2026-05-28 03:44:39] ID_LIKE="rhel fedora"
[2026-05-28 03:44:39] VERSION_ID="7"
[2026-05-28 03:44:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 03:44:39] ANSI_COLOR="0;31"
[2026-05-28 03:44:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 03:44:39] HOME_URL="https://www.centos.org/"
[2026-05-28 03:44:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 03:44:39] 
[2026-05-28 03:44:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 03:44:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 03:44:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 03:44:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 03:44:39] 
[2026-05-28 03:44:39] 2026-05-28 01:43:44,563 | INFO     | ***************************************
[2026-05-28 03:44:39] 2026-05-28 01:43:45,066 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/30
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | INFO     | sufficient remaining disk space (327746060288 B)
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | INFO     | update_server=False
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 03:44:39] 2026-05-28 01:43:45,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 03:44:39] 2026-05-28 01:43:45,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 03:44:39] 2026-05-28 01:43:45,650 | INFO     | all job control threads have been joined
[2026-05-28 03:44:39] 2026-05-28 01:43:45,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 03:44:39] 2026-05-28 01:43:45,892 | INFO     | aborting loop
[2026-05-28 03:44:39] 2026-05-28 01:43:46,027 | INFO     | all data control threads have been joined
[2026-05-28 03:44:39] 2026-05-28 01:43:46,079 | INFO     | [job] retrieve thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,080 | INFO     | [job] queue monitor thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,322 | INFO     | [payload] validate_post thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,575 | INFO     | all payload control threads have been joined
[2026-05-28 03:44:39] 2026-05-28 01:43:46,647 | INFO     | [job] validate thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,654 | INFO     | [job] control thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,664 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,763 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,898 | INFO     | [job] job monitor thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:46,901 | INFO     | [data] copytool_in thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,033 | INFO     | [data] control thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,080 | INFO     | [data] copytool_out thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,098 | INFO     | [payload] failed_post thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,293 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,580 | INFO     | [payload] control thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:47,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 03:44:39] 2026-05-28 01:43:51,613 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:43:55,974 | INFO     | job.realtimelogging is not enabled
[2026-05-28 03:44:39] 2026-05-28 01:43:56,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 03:44:39] 2026-05-28 01:44:15,626 | INFO     | PID=3130113 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 03:44:39] 2026-05-28 01:44:15,627 | INFO     | .. there are 5 such processes running
[2026-05-28 03:44:39] 2026-05-28 01:44:15,628 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 03:44:39] 2026-05-28 01:44:15,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 03:44:39] 2026-05-28 01:44:15,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 03:44:39] 2026-05-28 01:44:32,548 | INFO     | [monitor] cgroup control has ended
[2026-05-28 03:44:39] 2026-05-28 01:44:34,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23285233186624)>', '<ExcThread(monitor, started 23284990347008)>']
[2026-05-28 03:44:39] 2026-05-28 01:44:34,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 03:44:39] 2026-05-28 01:44:34,728 | INFO     | [monitor] control thread has ended
[2026-05-28 03:44:39] 2026-05-28 01:44:39,301 | INFO     | all workflow threads have been joined
[2026-05-28 03:44:39] 2026-05-28 01:44:39,301 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 03:44:39] 2026-05-28 01:44:39,301 | INFO     | traces error code: 0
[2026-05-28 03:44:39] 2026-05-28 01:44:39,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 03:44:39] 2026-05-28 01:44:39,382 [wrapper] ==== pilot stdout END ====
[2026-05-28 03:44:39] 2026-05-28 01:44:39,384 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 03:44:39] 2026-05-28 01:44:39,386 [wrapper] pilotpid: 3130113
[2026-05-28 03:44:39] 2026-05-28 01:44:39,387 [wrapper] Pilot exit status: 0
[2026-05-28 03:44:39] 2026-05-28 01:44:39,391 [wrapper] pandaids: 7155081656
[2026-05-28 03:44:39] 2026-05-28 01:44:39,451 [wrapper] cleanup supervisor_pilot 3211933 3130114
[2026-05-28 03:44:39] 2026-05-28 01:44:39,453 [wrapper] Test setup, not cleaning
[2026-05-28 03:44:39] 2026-05-28 01:44:39,455 [wrapper] apfmon messages muted
[2026-05-28 03:44:39] 2026-05-28 01:44:39,456 [wrapper] ==== wrapper stdout END ====
[2026-05-28 03:44:39] 2026-05-28 01:44:39,457 [wrapper] ==== wrapper stderr END ====
[2026-05-28 03:44:39]  *** Error codes and diagnostics ***
[2026-05-28 03:44:39]     "exeErrorCode": 0,
[2026-05-28 03:44:39]     "pilotErrorCode": 0,
[2026-05-28 03:44:39]  *** Listing of results directory ***
[2026-05-28 03:44:39] total 466176
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc    709501 May 27 23:24 pilot3.tar.gz
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc      5631 May 27 23:28 queuedata.json
[2026-05-28 03:44:39] -rwx------. 1 boinc boinc     36281 May 27 23:28 runpilot2-wrapper.sh
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc       100 May 28 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 03:44:39] -rwxr-xr-x. 1 boinc boinc      7986 May 28 03:21 run_atlas
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc       105 May 28 03:21 job.xml
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc      6629 May 28 03:21 init_data.xml
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc 277711128 May 28 03:21 EVNT.49539717._000700.pool.root.1
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc     15667 May 28 03:21 start_atlas.sh
[2026-05-28 03:44:39] drwxrwx--x. 2 boinc boinc      4096 May 28 03:21 shared
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc    722759 May 28 03:21 input.tar.gz
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc         0 May 28 03:21 boinc_lockfile
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc      2604 May 28 03:21 pandaJob.out
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc    996431 May 28 03:21 agis_schedconf.cvmfs.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc         0 May 28 03:21 agis_ddmendpoints.agis.ALL.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc   1251485 May 28 03:21 cric_ddmendpoints.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc       443 May 28 03:21 workernode_map.json
[2026-05-28 03:44:39] drwx------. 5 boinc boinc      4096 May 28 03:21 pilot3
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc       487 May 28 03:43 boinc_task_state.xml
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc 194698227 May 28 03:43 HITS.49545130._017059.pool.root.1
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc      1028 May 28 03:43 memory_monitor_summary.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc    334523 May 28 03:43 log.49545130._017059.job.log.tgz.1
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc      6423 May 28 03:43 heartbeat_new.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc      6314 May 28 03:43 heartbeat.json
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc        95 May 28 03:44 pilot_heartbeat.json
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc        27 May 28 03:44 wrapper_checkpoint.txt
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc      8192 May 28 03:44 boinc_mmap_file
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc      4905 May 28 03:44 pilotlog.txt
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc    176235 May 28 03:44 log.49545130._017059.job.log.1
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc       357 May 28 03:44 output.list
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc       410 May 28 03:44 runtime_log
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc    532480 May 28 03:44 result.tar.gz
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc      8846 May 28 03:44 runtime_log.err
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc       658 May 28 03:44 6219369002d6.diag
[2026-05-28 03:44:39] -rw-r--r--. 1 boinc boinc     21021 May 28 03:44 stderr.txt
[2026-05-28 03:44:39] HITS file was successfully produced:
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc 194698227 May 28 03:43 shared/HITS.pool.root.1
[2026-05-28 03:44:39]  *** Contents of shared directory: ***
[2026-05-28 03:44:39] total 462592
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc 277711128 May 28 03:21 ATLAS.root_0
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc     15667 May 28 03:21 start_atlas.sh
[2026-05-28 03:44:39] -rw-r--r--. 2 boinc boinc    722759 May 28 03:21 input.tar.gz
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc 194698227 May 28 03:43 HITS.pool.root.1
[2026-05-28 03:44:39] -rw-------. 1 boinc boinc    532480 May 28 03:44 result.tar.gz
03:44:40 (3125037): run_atlas exited; CPU time 13549.993923
03:44:40 (3125037): called boinc_finish(0)

</stderr_txt>
]]>

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