Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:28 (1818546): wrapper (7.7.26015): starting
03:07:28 (1818546): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 03:07:28] Arguments: --nthreads 4
[2026-05-28 03:07:28] Threads: 4
[2026-05-28 03:07:28] Checking for CVMFS
[2026-05-28 03:07:28] No cvmfs_config command found, will try listing directly
[2026-05-28 03:07:28] CVMFS is ok
[2026-05-28 03:07:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 03:07:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 03:07:28] Further information can be found at the LHC@home message board.
[2026-05-28 03:07:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 03:07:28] Checking for apptainer binary...
[2026-05-28 03:07:28] which: no apptainer in ((null))
[2026-05-28 03:07:28] apptainer is not installed, using version from CVMFS
[2026-05-28 03:07:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 03:07:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/40/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-05-28 03:07:28] apptainer works
[2026-05-28 03:07:28] Set ATHENA_PROC_NUMBER=4
[2026-05-28 03:07:28] Set ATHENA_CORE_NUMBER=4
[2026-05-28 03:07:28] Starting ATLAS job with PandaID=7155024857
[2026-05-28 03:07:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/40 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 05:37:13]  *** The last 200 lines of the pilot log: ***
[2026-05-28 05:37:13] 2026-05-28 03:36:24,052 | INFO     | this job has now completed (state=finished)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,053 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,053 | INFO     | log transfer has been attempted: DONE
[2026-05-28 05:37:13] 2026-05-28 03:36:24,053 | INFO     | job 7155024857 has finished - writing final server update
[2026-05-28 05:37:13] 2026-05-28 03:36:24,054 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1340657/.job.ad'
[2026-05-28 05:37:13] 2026-05-28 03:36:24,054 | INFO     | total number of processed events: 400 (read)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,077 | INFO     | using path: /var/lib/boinc/var/slot32/slots/40/PanDA_Pilot-7155024857/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,078 | INFO     | extracted standard info from prmon json
[2026-05-28 05:37:13] 2026-05-28 03:36:24,078 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 05:37:13] 2026-05-28 03:36:24,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 05:37:13] 2026-05-28 03:36:24,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 05:37:13] 2026-05-28 03:36:24,081 | INFO     | fitting pss+swap vs Time
[2026-05-28 05:37:13] 2026-05-28 03:36:24,082 | INFO     | sum of square deviations: 964976232.5
[2026-05-28 05:37:13] 2026-05-28 03:36:24,082 | INFO     | sum of deviations: 12807481035.5
[2026-05-28 05:37:13] 2026-05-28 03:36:24,082 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,083 | INFO     | mean y: 2295369.842465753
[2026-05-28 05:37:13] 2026-05-28 03:36:24,083 | INFO     | intersect: 2295369.842465753
[2026-05-28 05:37:13] 2026-05-28 03:36:24,083 | INFO     | chi2: 2.263947857283658
[2026-05-28 05:37:13] 2026-05-28 03:36:24,083 | INFO     | sum of square deviations: 869188390.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,084 | INFO     | sum of deviations: 21610212213.999992
[2026-05-28 05:37:13] 2026-05-28 03:36:24,084 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,084 | INFO     | mean y: 2308963.0780141843
[2026-05-28 05:37:13] 2026-05-28 03:36:24,084 | INFO     | intersect: 2308963.0780141843
[2026-05-28 05:37:13] 2026-05-28 03:36:24,085 | INFO     | chi2: 1.4003658759281452
[2026-05-28 05:37:13] 2026-05-28 03:36:24,085 | INFO     | current chi2=1.4003658759281452 (change=38.14495897408434 %)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,085 | INFO     | sum of square deviations: 779958810.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | sum of deviations: 20691701816.5
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | mean y: 2307392.595588235
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | intersect: 2307392.595588235
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | chi2: 1.4015577553574188
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | current chi2=1.4015577553574188 (change=-0.08511200178193466 %)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,086 | INFO     | right removable region: 135
[2026-05-28 05:37:13] 2026-05-28 03:36:24,087 | INFO     | sum of square deviations: 869188390.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,089 | INFO     | sum of deviations: -6320107947.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,089 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,089 | INFO     | mean y: 2325286.6028368794
[2026-05-28 05:37:13] 2026-05-28 03:36:24,089 | INFO     | intersect: 2325286.6028368794
[2026-05-28 05:37:13] 2026-05-28 03:36:24,090 | INFO     | chi2: 0.8946833682553893
[2026-05-28 05:37:13] 2026-05-28 03:36:24,090 | INFO     | current chi2=0.8946833682553893 (change=60.481273215856966 %)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,090 | INFO     | sum of square deviations: 779958810.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | sum of deviations: -6554837350.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | mean y: 2325687.470588235
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | intersect: 2325687.470588235
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | chi2: 0.895082878823387
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | current chi2=0.895082878823387 (change=-0.044653849861625586 %)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,091 | INFO     | left removable region: 10
[2026-05-28 05:37:13] 2026-05-28 03:36:24,092 | INFO     | sum of square deviations: 605592750.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,092 | INFO     | sum of deviations: 2047897856.0000002
[2026-05-28 05:37:13] 2026-05-28 03:36:24,092 | INFO     | mean x (centered): 0.0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,092 | INFO     | mean y: 2340986.56
[2026-05-28 05:37:13] 2026-05-28 03:36:24,092 | INFO     | intersect: 2340986.56
[2026-05-28 05:37:13] 2026-05-28 03:36:24,093 | INFO     | chi2: 0.0005868704289973255
[2026-05-28 05:37:13] 2026-05-28 03:36:24,093 | INFO     | current memory leak: 3.38 B/s (using 125 data points, chi2=0.00)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,093 | INFO     | could have reported an average CPU frequency of 2699 MHz (8 samples)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,094 | INFO     | ..............................
[2026-05-28 05:37:13] 2026-05-28 03:36:24,094 | INFO     | . Timing measurements:
[2026-05-28 05:37:13] 2026-05-28 03:36:24,094 | INFO     | . get job = 0 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,094 | INFO     | . initial setup = 8 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | . payload setup = 15 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | . stage-in = 0 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | . payload execution = 8878 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | . stage-out = 0 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | . log creation = 0 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,095 | INFO     | ..............................
[2026-05-28 05:37:13] 2026-05-28 03:36:24,214 | INFO     | 
[2026-05-28 05:37:13] 2026-05-28 03:36:24,214 | INFO     | job summary report
[2026-05-28 05:37:13] 2026-05-28 03:36:24,214 | INFO     | --------------------------------------------------
[2026-05-28 05:37:13] 2026-05-28 03:36:24,214 | INFO     | PanDA job id: 7155024857
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | task id: 49545130
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | errors: (none)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | pilot state: finished 
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | transexitcode: 0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | exeerrorcode: 0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | exeerrordiag: 
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | exitcode: 0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,215 | INFO     | exitmsg: OK
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | cpuconsumptiontime: 34119 s
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | nevents: 400
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | neventsw: 0
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | pid: 1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | pgrp: 1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | corecount: 4
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | event service: False
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | sizes: {0: 2266127, 1: 2267701, 11: 2267729, 8898: 2296287, 8899: 2305309, 8901: 2305687}
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | --------------------------------------------------
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | 
[2026-05-28 05:37:13] 2026-05-28 03:36:24,216 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/40
[2026-05-28 05:37:13] 2026-05-28 03:36:24,248 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,248 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,248 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,248 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | job 7155024857 has completed (purged errors)
[2026-05-28 05:37:13] 2026-05-28 03:36:24,250 | INFO     | overall cleanup function is called
[2026-05-28 05:37:13] 2026-05-28 03:36:25,260 | INFO     | --- collectZombieJob: --- 10, [1827979]
[2026-05-28 05:37:13] 2026-05-28 03:36:25,260 | INFO     | zombie collector waiting for pid 1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:25,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 05:37:13] 2026-05-28 03:36:25,260 | INFO     | collected zombie processes
[2026-05-28 05:37:13] 2026-05-28 03:36:25,261 | INFO     | will attempt to kill all subprocesses of pid=1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:25,942 | INFO     | process IDs to be killed: [1827979] (in reverse order)
[2026-05-28 05:37:13] 2026-05-28 03:36:26,259 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 05:37:13] 2026-05-28 03:36:26,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 05:37:13] 2026-05-28 03:36:26,290 | INFO     | did not find any defunct processes belonging to 1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:26,314 | INFO     | did not find any defunct processes belonging to 1827979
[2026-05-28 05:37:13] 2026-05-28 03:36:26,314 | INFO     | Ready for new job
[2026-05-28 05:37:13] 2026-05-28 03:36:26,317 | INFO     | ***************************************
[2026-05-28 05:37:13] 2026-05-28 03:36:26,317 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 05:37:13] 2026-05-28 03:36:26,317 | INFO     | ***************************************
[2026-05-28 05:37:13] 2026-05-28 03:36:26,317 | INFO     | 
[2026-05-28 05:37:13] 2026-05-28 03:36:26,326 | INFO     | architecture information:
[2026-05-28 05:37:13] 2026-05-28 03:36:26,326 | INFO     | executing command: cat /etc/os-release
[2026-05-28 05:37:13] 2026-05-28 03:36:26,349 | INFO     | cat /etc/os-release:
[2026-05-28 05:37:13] NAME="CentOS Linux"
[2026-05-28 05:37:13] VERSION="7 (Core)"
[2026-05-28 05:37:13] ID="centos"
[2026-05-28 05:37:13] ID_LIKE="rhel fedora"
[2026-05-28 05:37:13] VERSION_ID="7"
[2026-05-28 05:37:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 05:37:13] ANSI_COLOR="0;31"
[2026-05-28 05:37:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 05:37:13] HOME_URL="https://www.centos.org/"
[2026-05-28 05:37:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 05:37:13] 
[2026-05-28 05:37:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 05:37:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 05:37:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 05:37:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 05:37:13] 
[2026-05-28 05:37:13] 2026-05-28 03:36:26,349 | INFO     | ***************************************
[2026-05-28 05:37:13] 2026-05-28 03:36:26,852 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/40
[2026-05-28 05:37:13] 2026-05-28 03:36:26,880 | INFO     | sufficient remaining disk space (318704189440 B)
[2026-05-28 05:37:13] 2026-05-28 03:36:26,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 05:37:13] 2026-05-28 03:36:26,881 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 05:37:13] 2026-05-28 03:36:26,881 | INFO     | update_server=False
[2026-05-28 05:37:13] 2026-05-28 03:36:26,881 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 05:37:13] 2026-05-28 03:36:26,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 05:37:13] 2026-05-28 03:36:26,884 | INFO     | aborting loop
[2026-05-28 05:37:13] 2026-05-28 03:36:27,127 | INFO     | all job control threads have been joined
[2026-05-28 05:37:13] 2026-05-28 03:36:27,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 05:37:13] 2026-05-28 03:36:27,373 | INFO     | all payload control threads have been joined
[2026-05-28 05:37:13] 2026-05-28 03:36:27,886 | INFO     | all data control threads have been joined
[2026-05-28 05:37:13] 2026-05-28 03:36:27,886 | INFO     | [job] retrieve thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:27,890 | INFO     | [job] job monitor thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,132 | INFO     | [job] control thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,133 | INFO     | [payload] validate_post thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,379 | INFO     | [payload] control thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,388 | INFO     | [job] validate thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,450 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,563 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,892 | INFO     | [data] control thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:28,910 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:29,155 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:29,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 05:37:13] 2026-05-28 03:36:29,211 | INFO     | [data] copytool_out thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:29,222 | INFO     | [data] copytool_in thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:29,261 | INFO     | [payload] failed_post thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:29,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 05:37:13] 2026-05-28 03:36:30,203 | INFO     | [job] queue monitor thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:33,784 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 05:37:13] 2026-05-28 03:36:56,750 | INFO     | PID=1822643 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 05:37:13] 2026-05-28 03:36:56,750 | INFO     | .. there are 23 such processes running
[2026-05-28 05:37:13] 2026-05-28 03:36:56,750 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 05:37:13] 2026-05-28 03:36:56,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 05:37:13] 2026-05-28 03:36:56,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 05:37:13] 2026-05-28 03:37:05,747 | INFO     | [monitor] cgroup control has ended
[2026-05-28 05:37:13] 2026-05-28 03:37:07,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22922873849664)>', '<ExcThread(monitor, started 22922567595776)>']
[2026-05-28 05:37:13] 2026-05-28 03:37:07,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 05:37:13] 2026-05-28 03:37:07,808 | INFO     | [monitor] control thread has ended
[2026-05-28 05:37:13] 2026-05-28 03:37:12,530 | INFO     | all workflow threads have been joined
[2026-05-28 05:37:13] 2026-05-28 03:37:12,530 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 05:37:13] 2026-05-28 03:37:12,530 | INFO     | traces error code: 0
[2026-05-28 05:37:13] 2026-05-28 03:37:12,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 05:37:13] 2026-05-28 03:37:12,696 [wrapper] ==== pilot stdout END ====
[2026-05-28 05:37:13] 2026-05-28 03:37:12,700 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 05:37:13] 2026-05-28 03:37:12,704 [wrapper] pilotpid: 1822643
[2026-05-28 05:37:13] 2026-05-28 03:37:12,708 [wrapper] Pilot exit status: 0
[2026-05-28 05:37:13] 2026-05-28 03:37:12,723 [wrapper] pandaids: 7155024857
[2026-05-28 05:37:13] 2026-05-28 03:37:12,917 [wrapper] cleanup supervisor_pilot 2178965 1822644
[2026-05-28 05:37:13] 2026-05-28 03:37:12,921 [wrapper] Test setup, not cleaning
[2026-05-28 05:37:13] 2026-05-28 03:37:12,925 [wrapper] apfmon messages muted
[2026-05-28 05:37:13] 2026-05-28 03:37:12,931 [wrapper] ==== wrapper stdout END ====
[2026-05-28 05:37:13] 2026-05-28 03:37:12,935 [wrapper] ==== wrapper stderr END ====
[2026-05-28 05:37:13]  *** Error codes and diagnostics ***
[2026-05-28 05:37:13]     "exeErrorCode": 0,
[2026-05-28 05:37:13]     "pilotErrorCode": 0,
[2026-05-28 05:37:13]  *** Listing of results directory ***
[2026-05-28 05:37:13] total 464640
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc      5631 May 27 21:32 queuedata.json
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc    709501 May 27 21:32 pilot3.tar.gz
[2026-05-28 05:37:13] -rwx------. 1 boinc boinc     36281 May 27 21:34 runpilot2-wrapper.sh
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc       100 May 28 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 05:37:13] -rwxr-xr-x. 1 boinc boinc      7986 May 28 01:54 run_atlas
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc       105 May 28 01:54 job.xml
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc 283589376 May 28 03:07 EVNT.49539717._000605.pool.root.1
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc      6539 May 28 03:07 init_data.xml
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc     15667 May 28 03:07 start_atlas.sh
[2026-05-28 05:37:13] drwxrwx--x. 2 boinc boinc      4096 May 28 03:07 shared
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc    722757 May 28 03:07 input.tar.gz
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc         0 May 28 03:07 boinc_lockfile
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc      2604 May 28 03:07 pandaJob.out
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc    996423 May 28 03:07 agis_schedconf.cvmfs.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc         0 May 28 03:07 agis_ddmendpoints.agis.ALL.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc   1251485 May 28 03:07 cric_ddmendpoints.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc       442 May 28 03:07 workernode_map.json
[2026-05-28 05:37:13] drwx------. 5 boinc boinc      4096 May 28 03:07 pilot3
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc 186018788 May 28 05:35 HITS.49545130._014675.pool.root.1
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc       487 May 28 05:36 boinc_task_state.xml
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc        95 May 28 05:36 pilot_heartbeat.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc      1026 May 28 05:36 memory_monitor_summary.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc    281206 May 28 05:36 log.49545130._014675.job.log.tgz.1
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc      6412 May 28 05:36 heartbeat_new.json
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc      6303 May 28 05:36 heartbeat.json
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc      8192 May 28 05:37 boinc_mmap_file
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc        27 May 28 05:37 wrapper_checkpoint.txt
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc      4834 May 28 05:37 pilotlog.txt
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc    847465 May 28 05:37 log.49545130._014675.job.log.1
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc       357 May 28 05:37 output.list
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc       410 May 28 05:37 runtime_log
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc   1146880 May 28 05:37 result.tar.gz
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc      8844 May 28 05:37 runtime_log.err
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc       662 May 28 05:37 473ebae186a3.diag
[2026-05-28 05:37:13] -rw-r--r--. 1 boinc boinc     20793 May 28 05:37 stderr.txt
[2026-05-28 05:37:13] HITS file was successfully produced:
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc 186018788 May 28 05:35 shared/HITS.pool.root.1
[2026-05-28 05:37:13]  *** Contents of shared directory: ***
[2026-05-28 05:37:13] total 460456
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc 283589376 May 28 03:07 ATLAS.root_0
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc     15667 May 28 03:07 start_atlas.sh
[2026-05-28 05:37:13] -rw-r--r--. 2 boinc boinc    722757 May 28 03:07 input.tar.gz
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc 186018788 May 28 05:35 HITS.pool.root.1
[2026-05-28 05:37:13] -rw-------. 1 boinc boinc   1146880 May 28 05:37 result.tar.gz
05:37:14 (1818546): run_atlas exited; CPU time 34664.228727
05:37:14 (1818546): called boinc_finish(0)

</stderr_txt>
]]>

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