Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:15:30 (365789): wrapper (7.7.26015): starting
22:15:30 (365789): wrapper: running run_atlas (--nthreads 4)
[2026-05-27 22:15:30] Arguments: --nthreads 4
[2026-05-27 22:15:30] Threads: 4
[2026-05-27 22:15:30] Checking for CVMFS
[2026-05-27 22:15:30] No cvmfs_config command found, will try listing directly
[2026-05-27 22:15:30] CVMFS is ok
[2026-05-27 22:15:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 22:15:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 22:15:30] Further information can be found at the LHC@home message board.
[2026-05-27 22:15:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 22:15:30] Checking for apptainer binary...
[2026-05-27 22:15:30] which: no apptainer in ((null))
[2026-05-27 22:15:30] apptainer is not installed, using version from CVMFS
[2026-05-27 22:15:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 22:15:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-27 22:15:30] apptainer works
[2026-05-27 22:15:30] Set ATHENA_PROC_NUMBER=4
[2026-05-27 22:15:30] Set ATHENA_CORE_NUMBER=4
[2026-05-27 22:15:30] Starting ATLAS job with PandaID=7154774311
[2026-05-27 22:15:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 01:20:10]  *** The last 200 lines of the pilot log: ***
[2026-05-28 01:20:10] 2026-05-27 23:19:33,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,598 | INFO     | log transfer has been attempted: DONE
[2026-05-28 01:20:10] 2026-05-27 23:19:33,598 | INFO     | job 7154774311 has finished - writing final server update
[2026-05-28 01:20:10] 2026-05-27 23:19:33,598 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1219202/.job.ad'
[2026-05-28 01:20:10] 2026-05-27 23:19:33,599 | INFO     | total number of processed events: 400 (read)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,611 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7154774311/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,611 | INFO     | extracted standard info from prmon json
[2026-05-28 01:20:10] 2026-05-27 23:19:33,611 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 01:20:10] 2026-05-27 23:19:33,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 01:20:10] 2026-05-27 23:19:33,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 01:20:10] 2026-05-27 23:19:33,615 | INFO     | fitting pss+swap vs Time
[2026-05-28 01:20:10] 2026-05-27 23:19:33,615 | INFO     | sum of square deviations: 1838657730.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,616 | INFO     | sum of deviations: -26068547823.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,617 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,617 | INFO     | mean y: 2371201.773480663
[2026-05-28 01:20:10] 2026-05-27 23:19:33,617 | INFO     | intersect: 2371201.773480663
[2026-05-28 01:20:10] 2026-05-27 23:19:33,617 | INFO     | chi2: 2.23494236863147
[2026-05-28 01:20:10] 2026-05-27 23:19:33,618 | INFO     | sum of square deviations: 1690450300.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | sum of deviations: -14012591789.499994
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | mean y: 2383347.164772727
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | intersect: 2383347.164772727
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | chi2: 1.462401363394955
[2026-05-28 01:20:10] 2026-05-27 23:19:33,619 | INFO     | current chi2=1.462401363394955 (change=34.56648440154489 %)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,620 | INFO     | sum of square deviations: 1550429070.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | sum of deviations: -13417083773.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | mean y: 2383995.9707602337
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | intersect: 2383995.9707602337
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | chi2: 1.4605046876103738
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | current chi2=1.4605046876103738 (change=0.12969598032773869 %)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,621 | INFO     | right removable region: 170
[2026-05-28 01:20:10] 2026-05-27 23:19:33,622 | INFO     | sum of square deviations: 1690450300.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,623 | INFO     | sum of deviations: -47205794219.00001
[2026-05-28 01:20:10] 2026-05-27 23:19:33,623 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,623 | INFO     | mean y: 2392586.909090909
[2026-05-28 01:20:10] 2026-05-27 23:19:33,623 | INFO     | intersect: 2392586.909090909
[2026-05-28 01:20:10] 2026-05-27 23:19:33,623 | INFO     | chi2: 0.948117501193588
[2026-05-28 01:20:10] 2026-05-27 23:19:33,624 | INFO     | current chi2=0.948117501193588 (change=57.5775413943156 %)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,624 | INFO     | sum of square deviations: 1550429070.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,625 | INFO     | sum of deviations: -42804180558.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,625 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,625 | INFO     | mean y: 2387762.01754386
[2026-05-28 01:20:10] 2026-05-27 23:19:33,625 | INFO     | intersect: 2387762.01754386
[2026-05-28 01:20:10] 2026-05-27 23:19:33,626 | INFO     | chi2: 0.9431031692666946
[2026-05-28 01:20:10] 2026-05-27 23:19:33,626 | INFO     | current chi2=0.9431031692666946 (change=0.5288724151363962 %)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,626 | INFO     | left removable region: 10
[2026-05-28 01:20:10] 2026-05-27 23:19:33,626 | INFO     | sum of square deviations: 1270051720.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,627 | INFO     | sum of deviations: -29754469559.5
[2026-05-28 01:20:10] 2026-05-27 23:19:33,627 | INFO     | mean x (centered): 0.0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,627 | INFO     | mean y: 2402636.35625
[2026-05-28 01:20:10] 2026-05-27 23:19:33,627 | INFO     | intersect: 2402636.35625
[2026-05-28 01:20:10] 2026-05-27 23:19:33,628 | INFO     | chi2: 0.1385649518130182
[2026-05-28 01:20:10] 2026-05-27 23:19:33,628 | INFO     | current memory leak: -23.43 B/s (using 160 data points, chi2=0.14)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,628 | INFO     | could have reported an average CPU frequency of 2520 MHz (10 samples)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | ..............................
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . Timing measurements:
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . get job = 0 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . initial setup = 6 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . payload setup = 10 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . stage-in = 0 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . payload execution = 10995 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,629 | INFO     | . stage-out = 0 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,630 | INFO     | . log creation = 0 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,630 | INFO     | ..............................
[2026-05-28 01:20:10] 2026-05-27 23:19:33,770 | INFO     | 
[2026-05-28 01:20:10] 2026-05-27 23:19:33,770 | INFO     | job summary report
[2026-05-28 01:20:10] 2026-05-27 23:19:33,770 | INFO     | --------------------------------------------------
[2026-05-28 01:20:10] 2026-05-27 23:19:33,770 | INFO     | PanDA job id: 7154774311
[2026-05-28 01:20:10] 2026-05-27 23:19:33,770 | INFO     | task id: 49545130
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | errors: (none)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | pilot state: finished 
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | transexitcode: 0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | exeerrorcode: 0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | exeerrordiag: 
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | exitcode: 0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | exitmsg: OK
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | cpuconsumptiontime: 41934 s
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | nevents: 400
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | neventsw: 0
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | pid: 374754
[2026-05-28 01:20:10] 2026-05-27 23:19:33,771 | INFO     | pgrp: 374754
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | corecount: 4
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | event service: False
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | sizes: {0: 2265953, 1: 2267725, 11: 2267725, 11010: 2296866, 11012: 2305886, 11015: 2305942, 11016: 2306264}
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | --------------------------------------------------
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | 
[2026-05-28 01:20:10] 2026-05-27 23:19:33,772 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-05-28 01:20:10] 2026-05-27 23:19:33,792 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,794 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 01:20:10] 2026-05-27 23:19:33,795 | INFO     | job 7154774311 has completed (purged errors)
[2026-05-28 01:20:10] 2026-05-27 23:19:33,795 | INFO     | overall cleanup function is called
[2026-05-28 01:20:10] 2026-05-27 23:19:34,799 | INFO     | --- collectZombieJob: --- 10, [374754]
[2026-05-28 01:20:10] 2026-05-27 23:19:34,799 | INFO     | zombie collector waiting for pid 374754
[2026-05-28 01:20:10] 2026-05-27 23:19:34,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 01:20:10] 2026-05-27 23:19:34,799 | INFO     | collected zombie processes
[2026-05-28 01:20:10] 2026-05-27 23:19:34,799 | INFO     | will attempt to kill all subprocesses of pid=374754
[2026-05-28 01:20:10] 2026-05-27 23:19:35,072 | INFO     | process IDs to be killed: [374754] (in reverse order)
[2026-05-28 01:20:10] 2026-05-27 23:19:35,186 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 01:20:10] 2026-05-27 23:19:35,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 01:20:10] 2026-05-27 23:19:35,198 | INFO     | did not find any defunct processes belonging to 374754
[2026-05-28 01:20:10] 2026-05-27 23:19:35,209 | INFO     | did not find any defunct processes belonging to 374754
[2026-05-28 01:20:10] 2026-05-27 23:19:35,209 | INFO     | Ready for new job
[2026-05-28 01:20:10] 2026-05-27 23:19:35,211 | INFO     | ***************************************
[2026-05-28 01:20:10] 2026-05-27 23:19:35,211 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 01:20:10] 2026-05-27 23:19:35,211 | INFO     | ***************************************
[2026-05-28 01:20:10] 2026-05-27 23:19:35,211 | INFO     | 
[2026-05-28 01:20:10] 2026-05-27 23:19:35,215 | INFO     | architecture information:
[2026-05-28 01:20:10] 2026-05-27 23:19:35,215 | INFO     | executing command: cat /etc/os-release
[2026-05-28 01:20:10] 2026-05-27 23:19:35,230 | INFO     | cat /etc/os-release:
[2026-05-28 01:20:10] NAME="CentOS Linux"
[2026-05-28 01:20:10] VERSION="7 (Core)"
[2026-05-28 01:20:10] ID="centos"
[2026-05-28 01:20:10] ID_LIKE="rhel fedora"
[2026-05-28 01:20:10] VERSION_ID="7"
[2026-05-28 01:20:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 01:20:10] ANSI_COLOR="0;31"
[2026-05-28 01:20:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 01:20:10] HOME_URL="https://www.centos.org/"
[2026-05-28 01:20:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 01:20:10] 
[2026-05-28 01:20:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 01:20:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 01:20:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 01:20:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 01:20:10] 
[2026-05-28 01:20:10] 2026-05-27 23:19:35,230 | INFO     | ***************************************
[2026-05-28 01:20:10] 2026-05-27 23:19:35,732 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-05-28 01:20:10] 2026-05-27 23:19:35,749 | INFO     | sufficient remaining disk space (64388857856 B)
[2026-05-28 01:20:10] 2026-05-27 23:19:35,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 01:20:10] 2026-05-27 23:19:35,749 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 01:20:10] 2026-05-27 23:19:35,749 | INFO     | update_server=False
[2026-05-28 01:20:10] 2026-05-27 23:19:35,749 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 01:20:10] 2026-05-27 23:19:35,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 01:20:10] 2026-05-27 23:19:35,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 01:20:10] 2026-05-27 23:19:35,751 | INFO     | aborting loop
[2026-05-28 01:20:10] 2026-05-27 23:19:36,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 01:20:10] 2026-05-27 23:19:36,125 | INFO     | all data control threads have been joined
[2026-05-28 01:20:10] 2026-05-27 23:19:36,755 | INFO     | [job] retrieve thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:36,755 | INFO     | [job] job monitor thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:36,757 | INFO     | [job] validate thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:36,769 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:36,921 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:37,091 | INFO     | [payload] failed_post thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:37,131 | INFO     | [data] control thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:37,135 | INFO     | all payload control threads have been joined
[2026-05-28 01:20:10] 2026-05-27 23:19:37,226 | INFO     | all job control threads have been joined
[2026-05-28 01:20:10] 2026-05-27 23:19:37,441 | INFO     | [data] copytool_in thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:37,468 | INFO     | [payload] validate_post thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:38,007 | INFO     | [data] copytool_out thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:38,092 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:38,137 | INFO     | [payload] control thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:38,232 | INFO     | [job] control thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:38,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 01:20:10] 2026-05-27 23:19:39,739 | INFO     | [job] queue monitor thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:39,756 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:19:46,645 | INFO     | job.realtimelogging is not enabled
[2026-05-28 01:20:10] 2026-05-27 23:19:47,650 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 01:20:10] 2026-05-27 23:20:04,605 | INFO     | [monitor] cgroup control has ended
[2026-05-28 01:20:10] 2026-05-27 23:20:05,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22778948589376)>', '<ExcThread(monitor, started 22778716903168)>']
[2026-05-28 01:20:10] 2026-05-27 23:20:05,399 | INFO     | PID=369892 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-28 01:20:10] 2026-05-27 23:20:05,399 | INFO     | .. there are 9 such processes running
[2026-05-28 01:20:10] 2026-05-27 23:20:05,401 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 01:20:10] 2026-05-27 23:20:05,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 01:20:10] 2026-05-27 23:20:05,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 01:20:10] 2026-05-27 23:20:05,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 01:20:10] 2026-05-27 23:20:05,401 | INFO     | [monitor] control thread has ended
[2026-05-28 01:20:10] 2026-05-27 23:20:10,142 | INFO     | all workflow threads have been joined
[2026-05-28 01:20:10] 2026-05-27 23:20:10,142 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 01:20:10] 2026-05-27 23:20:10,143 | INFO     | traces error code: 0
[2026-05-28 01:20:10] 2026-05-27 23:20:10,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 01:20:10] 2026-05-27 23:20:10,283 [wrapper] ==== pilot stdout END ====
[2026-05-28 01:20:10] 2026-05-27 23:20:10,286 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 01:20:10] 2026-05-27 23:20:10,288 [wrapper] pilotpid: 369892
[2026-05-28 01:20:10] 2026-05-27 23:20:10,290 [wrapper] Pilot exit status: 0
[2026-05-28 01:20:10] 2026-05-27 23:20:10,300 [wrapper] pandaids: 7154774311
[2026-05-28 01:20:10] 2026-05-27 23:20:10,370 [wrapper] cleanup supervisor_pilot  562008 369893
[2026-05-28 01:20:10] 2026-05-27 23:20:10,372 [wrapper] Test setup, not cleaning
[2026-05-28 01:20:10] 2026-05-27 23:20:10,375 [wrapper] apfmon messages muted
[2026-05-28 01:20:10] 2026-05-27 23:20:10,377 [wrapper] ==== wrapper stdout END ====
[2026-05-28 01:20:10] 2026-05-27 23:20:10,379 [wrapper] ==== wrapper stderr END ====
[2026-05-28 01:20:10]  *** Error codes and diagnostics ***
[2026-05-28 01:20:10]     "exeErrorCode": 0,
[2026-05-28 01:20:10]     "pilotErrorCode": 0,
[2026-05-28 01:20:10]  *** Listing of results directory ***
[2026-05-28 01:20:10] total 459468
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc    709501 May 27 17:58 pilot3.tar.gz
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc      5631 May 27 18:00 queuedata.json
[2026-05-28 01:20:10] -rwx------. 1 boinc boinc     36281 May 27 18:01 runpilot2-wrapper.sh
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc       100 May 27 22:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 01:20:10] -rwxr-xr-x. 1 boinc boinc      7986 May 27 22:15 run_atlas
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc       105 May 27 22:15 job.xml
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc      6482 May 27 22:15 init_data.xml
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc 278749309 May 27 22:15 EVNT.49539717._000368.pool.root.1
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc     15667 May 27 22:15 start_atlas.sh
[2026-05-28 01:20:10] drwxrwx--x. 2 boinc boinc      4096 May 27 22:15 shared
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc    722753 May 27 22:15 input.tar.gz
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc         0 May 27 22:15 boinc_lockfile
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc      2603 May 27 22:15 pandaJob.out
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc    996431 May 27 22:15 agis_schedconf.cvmfs.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc   1251485 May 27 22:15 cric_ddmendpoints.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc       451 May 27 22:15 workernode_map.json
[2026-05-28 01:20:10] drwx------. 5 boinc boinc      4096 May 27 22:15 pilot3
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc 185085747 May 28 01:18 HITS.49545130._009239.pool.root.1
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc       487 May 28 01:18 boinc_task_state.xml
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc      1034 May 28 01:19 memory_monitor_summary.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc         0 May 28 01:19 agis_ddmendpoints.agis.ALL.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc    318603 May 28 01:19 log.49545130._009239.job.log.tgz.1
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc      6477 May 28 01:19 heartbeat_new.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc      6368 May 28 01:19 heartbeat.json
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc      8192 May 28 01:19 boinc_mmap_file
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc        27 May 28 01:19 wrapper_checkpoint.txt
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc        95 May 28 01:20 pilot_heartbeat.json
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc      4902 May 28 01:20 pilotlog.txt
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc   1046269 May 28 01:20 log.49545130._009239.job.log.1
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc       357 May 28 01:20 output.list
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc       410 May 28 01:20 runtime_log
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc   1382400 May 28 01:20 result.tar.gz
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc      8828 May 28 01:20 runtime_log.err
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc       665 May 28 01:20 1540ba0d7dba.diag
[2026-05-28 01:20:10] -rw-r--r--. 1 boinc boinc     20789 May 28 01:20 stderr.txt
[2026-05-28 01:20:10] HITS file was successfully produced:
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc 185085747 May 28 01:18 shared/HITS.pool.root.1
[2026-05-28 01:20:10]  *** Contents of shared directory: ***
[2026-05-28 01:20:10] total 455052
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc 278749309 May 27 22:15 ATLAS.root_0
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc     15667 May 27 22:15 start_atlas.sh
[2026-05-28 01:20:10] -rw-r--r--. 2 boinc boinc    722753 May 27 22:15 input.tar.gz
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc 185085747 May 28 01:18 HITS.pool.root.1
[2026-05-28 01:20:10] -rw-------. 1 boinc boinc   1382400 May 28 01:20 result.tar.gz
01:20:11 (365789): run_atlas exited; CPU time 42333.314503
01:20:11 (365789): called boinc_finish(0)

</stderr_txt>
]]>

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