Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:46:18 (19122): wrapper (7.7.26015): starting
19:46:18 (19122): wrapper: running run_atlas (--nthreads 8)
[2026-05-27 19:46:18] Arguments: --nthreads 8
[2026-05-27 19:46:18] Threads: 8
[2026-05-27 19:46:18] Checking for CVMFS
[2026-05-27 19:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-27 19:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-27 19:46:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-27 19:46:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-27 19:46:18] 2.11.0.0 4375 22041 66308 159864 3 188 3975646 4096001 3659 130560 0 2247964 99.373 2145821 864 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-27 19:46:18] CVMFS is ok
[2026-05-27 19:46:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 19:46:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 19:46:18] Further information can be found at the LHC@home message board.
[2026-05-27 19:46:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 19:46:18] Checking for apptainer binary...
[2026-05-27 19:46:18] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-27 19:46:18] apptainer is not installed, using version from CVMFS
[2026-05-27 19:46:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 19:46:18] WARNING: Environment variable TMPDIR already has value [/tmp/job_11658609/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node355
[2026-05-27 19:46:18] apptainer works
[2026-05-27 19:46:18] Set ATHENA_PROC_NUMBER=8
[2026-05-27 19:46:18] Set ATHENA_CORE_NUMBER=8
[2026-05-27 19:46:18] Starting ATLAS job with PandaID=7154497142
[2026-05-27 19:46:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11658609/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-27 20:34:35]  *** The last 200 lines of the pilot log: ***
[2026-05-27 20:34:35]  direct_access_wan=False
[2026-05-27 20:34:35]  domain=
[2026-05-27 20:34:35]  filesize=295608
[2026-05-27 20:34:35]  filetype=log
[2026-05-27 20:34:35]  guid=261171fb-9887-420f-b9db-9f38f98bd6e2
[2026-05-27 20:34:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-27 20:34:35]  is_altstaged=None
[2026-05-27 20:34:35]  is_tar=False
[2026-05-27 20:34:35]  lfn=log.49545130._004659.job.log.tgz.1
[2026-05-27 20:34:35]  mtime=0
[2026-05-27 20:34:35]  protocol_id=None
[2026-05-27 20:34:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-27 20:34:35]  replicas=None
[2026-05-27 20:34:35]  scope=mc23_13p6TeV
[2026-05-27 20:34:35]  status=None
[2026-05-27 20:34:35]  status_code=0
[2026-05-27 20:34:35]  storage_token=
[2026-05-27 20:34:35]  surl=/tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/log.49545130._004659.job.log.tgz.1
[2026-05-27 20:34:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/f4/log.49545130._004659.job.log.tgz.1
[2026-05-27 20:34:35]  workdir=None
[2026-05-27 20:34:35] ]
[2026-05-27 20:34:35] 2026-05-27 18:33:46,280 | INFO     | transferring file log.49545130._004659.job.log.tgz.1 from /tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/log.49545130._004659.job.log.tgz.1 to /tmp/j
[2026-05-27 20:34:35] 2026-05-27 18:33:46,280 | INFO     | executing command: /usr/bin/env mv /tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/log.49545130._004659.job.log.tgz.1 /tmp/job_11658609/atlas/pilot/sl
[2026-05-27 20:34:35] 2026-05-27 18:33:46,288 | INFO     | adding to output.list: log.49545130._004659.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/f4/log.49545130._004659.job.log.tg
[2026-05-27 20:34:35] 2026-05-27 18:33:46,289 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-27 20:34:35] 2026-05-27 18:33:46,289 | INFO     | summary of transferred files:
[2026-05-27 20:34:35] 2026-05-27 18:33:46,289 | INFO     |  -- lfn=log.49545130._004659.job.log.tgz.1, status_code=0, status=transferred
[2026-05-27 20:34:35] 2026-05-27 18:33:46,289 | INFO     | stage-out finished correctly
[2026-05-27 20:34:35] 2026-05-27 18:33:47,930 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-27 20:34:35] 2026-05-27 18:33:49,335 | WARNING  | process 5908 can no longer be monitored (due to stat problems) - aborting
[2026-05-27 20:34:35] 2026-05-27 18:33:49,335 | INFO     | using path: /tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/memory_monitor_summary.json (trf name=prmon)
[2026-05-27 20:34:35] 2026-05-27 18:33:49,407 | INFO     | number of running child processes to parent process 5908: 1
[2026-05-27 20:34:35] 2026-05-27 18:33:49,407 | INFO     | maximum number of monitored processes: 6
[2026-05-27 20:34:35] 2026-05-27 18:33:50,964 | INFO     | job 7154497142 has state=finished
[2026-05-27 20:34:35] 2026-05-27 18:33:50,965 | INFO     | preparing for final server update for job 7154497142 in state='finished'
[2026-05-27 20:34:35] 2026-05-27 18:33:50,965 | INFO     | reading metadata from: /tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/jobReport.json
[2026-05-27 20:34:35] 2026-05-27 18:33:50,966 | INFO     | added worker_node to metadata from /tmp/job_11658609/atlas/pilot/slots/0/workernode_map.json
[2026-05-27 20:34:35] 2026-05-27 18:33:50,966 | INFO     | this job has now completed (state=finished)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,966 | INFO     | log transfer has been attempted: DONE
[2026-05-27 20:34:35] 2026-05-27 18:33:50,967 | INFO     | job 7154497142 has finished - writing final server update
[2026-05-27 20:34:35] 2026-05-27 18:33:50,967 | INFO     | total number of processed events: 400 (read)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,984 | INFO     | using path: /tmp/job_11658609/atlas/pilot/slots/0/PanDA_Pilot-7154497142/memory_monitor_summary.json (trf name=prmon)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,984 | INFO     | extracted standard info from prmon json
[2026-05-27 20:34:35] 2026-05-27 18:33:50,984 | INFO     | extracted standard memory fields from prmon json
[2026-05-27 20:34:35] 2026-05-27 18:33:50,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-27 20:34:35] 2026-05-27 18:33:50,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | fitting pss+swap vs Time
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | sum of square deviations: 19832930.0
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | sum of deviations: -441815588.5
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | mean x (centered): 0.0
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | mean y: 2573932.825
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | intersect: 2573932.825
[2026-05-27 20:34:35] 2026-05-27 18:33:50,985 | INFO     | chi2: 0.0016465482396414205
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | current memory leak: -22.28 B/s (using 40 data points, chi2=0.00)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | could have reported an average CPU frequency of 2534 MHz (5 samples)
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | ..............................
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . Timing measurements:
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . get job = 0 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . initial setup = 2 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . payload setup = 3 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . stage-in = 0 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . payload execution = 2821 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . stage-out = 0 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | . log creation = 0 s
[2026-05-27 20:34:35] 2026-05-27 18:33:50,986 | INFO     | ..............................
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | 
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | job summary report
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | --------------------------------------------------
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | PanDA job id: 7154497142
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | task id: 49545130
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | errors: (none)
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | pilot state: finished 
[2026-05-27 20:34:35] 2026-05-27 18:33:51,035 | INFO     | transexitcode: 0
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | exeerrorcode: 0
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | exeerrordiag: 
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | exitcode: 0
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | exitmsg: OK
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | cpuconsumptiontime: 20642 s
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | nevents: 400
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | neventsw: 0
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | pid: 5908
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | pgrp: 5908
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | corecount: 8
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | event service: False
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | sizes: {0: 2267812, 11: 2267812, 2829: 2302340, 2831: 2302340, 2834: 2302566}
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | --------------------------------------------------
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | 
[2026-05-27 20:34:35] 2026-05-27 18:33:51,036 | INFO     | executing command: ls -lF /tmp/job_11658609/atlas/pilot/slots/0
[2026-05-27 20:34:35] 2026-05-27 18:33:51,045 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,045 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,045 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,045 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | job 7154497142 has completed (purged errors)
[2026-05-27 20:34:35] 2026-05-27 18:33:51,046 | INFO     | overall cleanup function is called
[2026-05-27 20:34:35] 2026-05-27 18:33:52,052 | INFO     | --- collectZombieJob: --- 10, [5908]
[2026-05-27 20:34:35] 2026-05-27 18:33:52,052 | INFO     | zombie collector waiting for pid 5908
[2026-05-27 20:34:35] 2026-05-27 18:33:52,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-27 20:34:35] 2026-05-27 18:33:52,052 | INFO     | collected zombie processes
[2026-05-27 20:34:35] 2026-05-27 18:33:52,053 | INFO     | will attempt to kill all subprocesses of pid=5908
[2026-05-27 20:34:35] 2026-05-27 18:33:52,130 | INFO     | process IDs to be killed: [5908] (in reverse order)
[2026-05-27 20:34:35] 2026-05-27 18:33:52,164 | WARNING  | found no corresponding commands to process id(s)
[2026-05-27 20:34:35] 2026-05-27 18:33:52,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-27 20:34:35] 2026-05-27 18:33:52,168 | INFO     | did not find any defunct processes belonging to 5908
[2026-05-27 20:34:35] 2026-05-27 18:33:52,171 | INFO     | did not find any defunct processes belonging to 5908
[2026-05-27 20:34:35] 2026-05-27 18:33:52,171 | INFO     | Ready for new job
[2026-05-27 20:34:35] 2026-05-27 18:33:52,171 | INFO     | ***************************************
[2026-05-27 20:34:35] 2026-05-27 18:33:52,172 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-27 20:34:35] 2026-05-27 18:33:52,172 | INFO     | ***************************************
[2026-05-27 20:34:35] 2026-05-27 18:33:52,172 | INFO     | 
[2026-05-27 20:34:35] 2026-05-27 18:33:52,185 | INFO     | architecture information:
[2026-05-27 20:34:35] 2026-05-27 18:33:52,185 | INFO     | executing command: cat /etc/os-release
[2026-05-27 20:34:35] 2026-05-27 18:33:52,192 | INFO     | cat /etc/os-release:
[2026-05-27 20:34:35] NAME="CentOS Linux"
[2026-05-27 20:34:35] VERSION="7 (Core)"
[2026-05-27 20:34:35] ID="centos"
[2026-05-27 20:34:35] ID_LIKE="rhel fedora"
[2026-05-27 20:34:35] VERSION_ID="7"
[2026-05-27 20:34:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-27 20:34:35] ANSI_COLOR="0;31"
[2026-05-27 20:34:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-27 20:34:35] HOME_URL="https://www.centos.org/"
[2026-05-27 20:34:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-27 20:34:35] 
[2026-05-27 20:34:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-27 20:34:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-27 20:34:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-27 20:34:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-27 20:34:35] 
[2026-05-27 20:34:35] 2026-05-27 18:33:52,192 | INFO     | ***************************************
[2026-05-27 20:34:35] 2026-05-27 18:33:52,695 | INFO     | executing command: df -mP /tmp/job_11658609/atlas/pilot/slots/0
[2026-05-27 20:34:35] 2026-05-27 18:33:52,701 | INFO     | sufficient remaining disk space (224988758016 B)
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | INFO     | current server update state: UPDATING_FINAL
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | INFO     | update_server=False
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-27 20:34:35] 2026-05-27 18:33:52,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-27 20:34:35] 2026-05-27 18:33:52,761 | INFO     | all data control threads have been joined
[2026-05-27 20:34:35] 2026-05-27 18:33:52,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-27 20:34:35] 2026-05-27 18:33:52,915 | INFO     | aborting loop
[2026-05-27 20:34:35] 2026-05-27 18:33:53,707 | INFO     | [job] retrieve thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:53,707 | INFO     | [job] queue monitor thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:53,766 | INFO     | [data] control thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:53,813 | INFO     | [data] copytool_in thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:53,920 | INFO     | [job] job monitor thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:53,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-27 20:34:35] 2026-05-27 18:33:54,060 | INFO     | all job control threads have been joined
[2026-05-27 20:34:35] 2026-05-27 18:33:54,123 | INFO     | [payload] execute_payloads thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:54,148 | INFO     | all payload control threads have been joined
[2026-05-27 20:34:35] 2026-05-27 18:33:54,656 | INFO     | [payload] validate_post thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:54,707 | INFO     | [data] copytool_out thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:54,763 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:54,957 | INFO     | [job] validate thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:55,030 | INFO     | [payload] failed_post thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:55,065 | INFO     | [job] control thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:55,085 | INFO     | [job] create_data_payload thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:55,093 | INFO     | [payload] validate_pre thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:55,153 | INFO     | [payload] control thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:33:57,985 | INFO     | [data] queue_monitor thread has finished
[2026-05-27 20:34:35] 2026-05-27 18:34:22,444 | INFO     | PID=23877 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-27 20:34:35] 2026-05-27 18:34:22,444 | INFO     | .. there are 2 such processes running
[2026-05-27 20:34:35] 2026-05-27 18:34:22,445 | INFO     | found 0 job(s) in 20 queues
[2026-05-27 20:34:35] 2026-05-27 18:34:22,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-27 20:34:35] 2026-05-27 18:34:22,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-27 20:34:35] 2026-05-27 18:34:29,978 | INFO     | [monitor] cgroup control has ended
[2026-05-27 20:34:35] 2026-05-27 18:34:30,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065464064)>']
[2026-05-27 20:34:35] 2026-05-27 18:34:31,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-27 20:34:35] 2026-05-27 18:34:31,489 | INFO     | [monitor] control thread has ended
[2026-05-27 20:34:35] 2026-05-27 18:34:35,576 | INFO     | all workflow threads have been joined
[2026-05-27 20:34:35] 2026-05-27 18:34:35,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-27 20:34:35] 2026-05-27 18:34:35,576 | INFO     | traces error code: 0
[2026-05-27 20:34:35] 2026-05-27 18:34:35,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-27 20:34:35] 2026-05-27 18:34:35,627 [wrapper] ==== pilot stdout END ====
[2026-05-27 20:34:35] 2026-05-27 18:34:35,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-27 20:34:35] 2026-05-27 18:34:35,630 [wrapper] pilotpid: 23877
[2026-05-27 20:34:35] 2026-05-27 18:34:35,631 [wrapper] Pilot exit status: 0
[2026-05-27 20:34:35] 2026-05-27 18:34:35,635 [wrapper] pandaids: 7154497142
[2026-05-27 20:34:35] 2026-05-27 18:34:35,658 [wrapper] cleanup supervisor_pilot 23250 23878
[2026-05-27 20:34:35] 2026-05-27 18:34:35,659 [wrapper] Test setup, not cleaning
[2026-05-27 20:34:35] 2026-05-27 18:34:35,660 [wrapper] apfmon messages muted
[2026-05-27 20:34:35] 2026-05-27 18:34:35,661 [wrapper] ==== wrapper stdout END ====
[2026-05-27 20:34:35] 2026-05-27 18:34:35,662 [wrapper] ==== wrapper stderr END ====
[2026-05-27 20:34:35]  *** Error codes and diagnostics ***
[2026-05-27 20:34:35]     "exeErrorCode": 0,
[2026-05-27 20:34:35]     "pilotErrorCode": 0,
[2026-05-27 20:34:35]  *** Listing of results directory ***
[2026-05-27 20:34:35] total 464392
[2026-05-27 20:34:35] -rwx------ 1 mf493845 unix-user     36281 May 27 12:28 runpilot2-wrapper.sh
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      5631 May 27 12:29 queuedata.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    709501 May 27 12:29 pilot3.tar.gz
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       100 May 27 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-27 20:34:35] -rwxr-xr-x 1 mf493845 unix-user      7986 May 27 18:34 run_atlas
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       105 May 27 18:34 job.xml
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user 283339788 May 27 19:46 EVNT.49539717._000186.pool.root.1
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user     15667 May 27 19:46 start_atlas.sh
[2026-05-27 20:34:35] drwxrwx--x 2 mf493845 unix-user       100 May 27 19:46 shared
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user    722758 May 27 19:46 input.tar.gz
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      6307 May 27 19:46 init_data.xml
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user         0 May 27 19:46 boinc_setup_complete
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      8192 May 27 19:46 boinc_mmap_file
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user         0 May 27 19:46 boinc_lockfile
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      2603 May 27 19:46 pandaJob.out
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    996447 May 27 19:46 agis_schedconf.cvmfs.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user         0 May 27 19:46 agis_ddmendpoints.agis.ALL.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user   1251485 May 27 19:46 cric_ddmendpoints.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       416 May 27 19:46 workernode_map.json
[2026-05-27 20:34:35] drwx------ 5 mf493845 unix-user       500 May 27 19:46 pilot3
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user 187067346 May 27 20:33 HITS.49545130._004659.pool.root.1
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      1016 May 27 20:33 memory_monitor_summary.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    295608 May 27 20:33 log.49545130._004659.job.log.tgz.1
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      6373 May 27 20:33 heartbeat_new.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      6263 May 27 20:33 heartbeat.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user        95 May 27 20:34 pilot_heartbeat.json
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      4834 May 27 20:34 pilotlog.txt
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    317791 May 27 20:34 log.49545130._004659.job.log.1
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       357 May 27 20:34 output.list
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       410 May 27 20:34 runtime_log
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    634880 May 27 20:34 result.tar.gz
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user      8842 May 27 20:34 runtime_log.err
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user       641 May 27 20:34 c759be10102f.diag
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user     21479 May 27 20:34 stderr.txt
[2026-05-27 20:34:35] HITS file was successfully produced:
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user 187067346 May 27 20:33 shared/HITS.pool.root.1
[2026-05-27 20:34:35]  *** Contents of shared directory: ***
[2026-05-27 20:34:35] total 460728
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user 283339788 May 27 19:46 ATLAS.root_0
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user     15667 May 27 19:46 start_atlas.sh
[2026-05-27 20:34:35] -rw-r--r-- 2 mf493845 unix-user    722758 May 27 19:46 input.tar.gz
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user 187067346 May 27 20:33 HITS.pool.root.1
[2026-05-27 20:34:35] -rw------- 1 mf493845 unix-user    634880 May 27 20:34 result.tar.gz
20:34:36 (19122): run_atlas exited; CPU time 20679.895009
20:34:36 (19122): called boinc_finish(0)

</stderr_txt>
]]>

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