Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:46:29 (6875): wrapper (7.7.26015): starting
19:46:29 (6875): wrapper: running run_atlas (--nthreads 8)
[2026-05-27 19:46:29] Arguments: --nthreads 8
[2026-05-27 19:46:29] Threads: 8
[2026-05-27 19:46:29] Checking for CVMFS
[2026-05-27 19:46:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-27 19:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-27 19:46:29] Running cvmfs_config stat atlas.cern.ch
[2026-05-27 19:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-27 19:46:30] 2.11.0.0 4310 22171 59932 159864 1 188 2773856 4096000 5478 130560 0 1611615 99.277 1650852 813 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-27 19:46:30] CVMFS is ok
[2026-05-27 19:46:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 19:46:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 19:46:30] Further information can be found at the LHC@home message board.
[2026-05-27 19:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 19:46:30] Checking for apptainer binary...
[2026-05-27 19:46:30] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-27 19:46:30] apptainer is not installed, using version from CVMFS
[2026-05-27 19:46:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 19:46:30] WARNING: Environment variable TMPDIR already has value [/tmp/job_11658630/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node155
[2026-05-27 19:46:30] apptainer works
[2026-05-27 19:46:30] Set ATHENA_PROC_NUMBER=8
[2026-05-27 19:46:30] Set ATHENA_CORE_NUMBER=8
[2026-05-27 19:46:30] Starting ATLAS job with PandaID=7154473726
[2026-05-27 19:46:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11658630/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-27 20:35:46]  *** The last 200 lines of the pilot log: ***
[2026-05-27 20:35:46]  ddmendpoint_alt=None
[2026-05-27 20:35:46]  direct_access_lan=False
[2026-05-27 20:35:46]  direct_access_wan=False
[2026-05-27 20:35:46]  domain=
[2026-05-27 20:35:46]  filesize=283408
[2026-05-27 20:35:46]  filetype=log
[2026-05-27 20:35:46]  guid=417a05f2-a80b-4447-aba4-0f594903bcd9
[2026-05-27 20:35:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-27 20:35:46]  is_altstaged=None
[2026-05-27 20:35:46]  is_tar=False
[2026-05-27 20:35:46]  lfn=log.49545130._003723.job.log.tgz.1
[2026-05-27 20:35:46]  mtime=0
[2026-05-27 20:35:46]  protocol_id=None
[2026-05-27 20:35:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-27 20:35:46]  replicas=None
[2026-05-27 20:35:46]  scope=mc23_13p6TeV
[2026-05-27 20:35:46]  status=None
[2026-05-27 20:35:46]  status_code=0
[2026-05-27 20:35:46]  storage_token=
[2026-05-27 20:35:46]  surl=/tmp/job_11658630/atlas/pilot/slots/0/PanDA_Pilot-7154473726/log.49545130._003723.job.log.tgz.1
[2026-05-27 20:35:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/e3/log.49545130._003723.job.log.tgz.1
[2026-05-27 20:35:46]  workdir=None
[2026-05-27 20:35:46] ]
[2026-05-27 20:35:46] 2026-05-27 18:35:00,567 | INFO     | transferring file log.49545130._003723.job.log.tgz.1 from /tmp/job_11658630/atlas/pilot/slots/0/PanDA_Pilot-7154473726/log.49545130._003723.job.log.tgz.1 to /tmp/j
[2026-05-27 20:35:46] 2026-05-27 18:35:00,567 | INFO     | executing command: /usr/bin/env mv /tmp/job_11658630/atlas/pilot/slots/0/PanDA_Pilot-7154473726/log.49545130._003723.job.log.tgz.1 /tmp/job_11658630/atlas/pilot/sl
[2026-05-27 20:35:46] 2026-05-27 18:35:00,575 | INFO     | adding to output.list: log.49545130._003723.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/e3/log.49545130._003723.job.log.tg
[2026-05-27 20:35:46] 2026-05-27 18:35:00,575 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-27 20:35:46] 2026-05-27 18:35:00,575 | INFO     | summary of transferred files:
[2026-05-27 20:35:46] 2026-05-27 18:35:00,575 | INFO     |  -- lfn=log.49545130._003723.job.log.tgz.1, status_code=0, status=transferred
[2026-05-27 20:35:46] 2026-05-27 18:35:00,575 | INFO     | stage-out finished correctly
[2026-05-27 20:35:46] 2026-05-27 18:35:00,704 | INFO     | monitor loop #222: job 0:7154473726 is in state 'finished'
[2026-05-27 20:35:46] 2026-05-27 18:35:00,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-27 20:35:46] 2026-05-27 18:35:02,522 | INFO     | job 7154473726 has state=finished
[2026-05-27 20:35:46] 2026-05-27 18:35:02,522 | INFO     | preparing for final server update for job 7154473726 in state='finished'
[2026-05-27 20:35:46] 2026-05-27 18:35:02,522 | INFO     | reading metadata from: /tmp/job_11658630/atlas/pilot/slots/0/PanDA_Pilot-7154473726/jobReport.json
[2026-05-27 20:35:46] 2026-05-27 18:35:02,523 | INFO     | added worker_node to metadata from /tmp/job_11658630/atlas/pilot/slots/0/workernode_map.json
[2026-05-27 20:35:46] 2026-05-27 18:35:02,523 | INFO     | this job has now completed (state=finished)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,523 | INFO     | log transfer has been attempted: DONE
[2026-05-27 20:35:46] 2026-05-27 18:35:02,523 | INFO     | job 7154473726 has finished - writing final server update
[2026-05-27 20:35:46] 2026-05-27 18:35:02,524 | INFO     | total number of processed events: 400 (read)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,541 | INFO     | using path: /tmp/job_11658630/atlas/pilot/slots/0/PanDA_Pilot-7154473726/memory_monitor_summary.json (trf name=prmon)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,541 | INFO     | extracted standard info from prmon json
[2026-05-27 20:35:46] 2026-05-27 18:35:02,541 | INFO     | extracted standard memory fields from prmon json
[2026-05-27 20:35:46] 2026-05-27 18:35:02,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-27 20:35:46] 2026-05-27 18:35:02,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | fitting pss+swap vs Time
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | sum of square deviations: 21358540.0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | sum of deviations: -247581188.0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | mean x (centered): 0.0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | mean y: 2570810.3658536584
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | intersect: 2570810.3658536584
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | chi2: 0.001568764443148103
[2026-05-27 20:35:46] 2026-05-27 18:35:02,542 | INFO     | current memory leak: -11.59 B/s (using 41 data points, chi2=0.00)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | could have reported an average CPU frequency of 2895 MHz (5 samples)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | ..............................
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . Timing measurements:
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . get job = 0 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . initial setup = 2 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . payload setup = 3 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . stage-in = 0 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . payload execution = 2885 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . stage-out = 0 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | . log creation = 0 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,543 | INFO     | ..............................
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | 
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | job summary report
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | --------------------------------------------------
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | PanDA job id: 7154473726
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | task id: 49545130
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | errors: (none)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | pilot state: finished 
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | transexitcode: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,590 | INFO     | exeerrorcode: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | exeerrordiag: 
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | exitcode: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | exitmsg: OK
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | cpuconsumptiontime: 20759 s
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | nevents: 400
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | neventsw: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | pid: 17499
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | pgrp: 17499
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | corecount: 8
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | event service: False
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | sizes: {0: 2267812, 11: 2267812, 2892: 2302349, 2894: 2302575}
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | --------------------------------------------------
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | 
[2026-05-27 20:35:46] 2026-05-27 18:35:02,591 | INFO     | executing command: ls -lF /tmp/job_11658630/atlas/pilot/slots/0
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | job 7154473726 has completed (purged errors)
[2026-05-27 20:35:46] 2026-05-27 18:35:02,601 | INFO     | overall cleanup function is called
[2026-05-27 20:35:46] 2026-05-27 18:35:03,607 | INFO     | --- collectZombieJob: --- 10, [17499]
[2026-05-27 20:35:46] 2026-05-27 18:35:03,607 | INFO     | zombie collector waiting for pid 17499
[2026-05-27 20:35:46] 2026-05-27 18:35:03,607 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-27 20:35:46] 2026-05-27 18:35:03,607 | INFO     | collected zombie processes
[2026-05-27 20:35:46] 2026-05-27 18:35:03,607 | INFO     | will attempt to kill all subprocesses of pid=17499
[2026-05-27 20:35:46] 2026-05-27 18:35:03,684 | INFO     | process IDs to be killed: [17499] (in reverse order)
[2026-05-27 20:35:46] 2026-05-27 18:35:03,716 | WARNING  | found no corresponding commands to process id(s)
[2026-05-27 20:35:46] 2026-05-27 18:35:03,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-27 20:35:46] 2026-05-27 18:35:03,719 | INFO     | did not find any defunct processes belonging to 17499
[2026-05-27 20:35:46] 2026-05-27 18:35:03,722 | INFO     | did not find any defunct processes belonging to 17499
[2026-05-27 20:35:46] 2026-05-27 18:35:03,722 | INFO     | Ready for new job
[2026-05-27 20:35:46] 2026-05-27 18:35:03,723 | INFO     | ***************************************
[2026-05-27 20:35:46] 2026-05-27 18:35:03,723 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-27 20:35:46] 2026-05-27 18:35:03,723 | INFO     | ***************************************
[2026-05-27 20:35:46] 2026-05-27 18:35:03,723 | INFO     | 
[2026-05-27 20:35:46] 2026-05-27 18:35:03,738 | INFO     | architecture information:
[2026-05-27 20:35:46] 2026-05-27 18:35:03,738 | INFO     | executing command: cat /etc/os-release
[2026-05-27 20:35:46] 2026-05-27 18:35:03,743 | INFO     | cat /etc/os-release:
[2026-05-27 20:35:46] NAME="CentOS Linux"
[2026-05-27 20:35:46] VERSION="7 (Core)"
[2026-05-27 20:35:46] ID="centos"
[2026-05-27 20:35:46] ID_LIKE="rhel fedora"
[2026-05-27 20:35:46] VERSION_ID="7"
[2026-05-27 20:35:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-27 20:35:46] ANSI_COLOR="0;31"
[2026-05-27 20:35:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-27 20:35:46] HOME_URL="https://www.centos.org/"
[2026-05-27 20:35:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-27 20:35:46] 
[2026-05-27 20:35:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-27 20:35:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-27 20:35:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-27 20:35:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-27 20:35:46] 
[2026-05-27 20:35:46] 2026-05-27 18:35:03,744 | INFO     | ***************************************
[2026-05-27 20:35:46] 2026-05-27 18:35:04,246 | INFO     | executing command: df -mP /tmp/job_11658630/atlas/pilot/slots/0
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | INFO     | sufficient remaining disk space (226588884992 B)
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | INFO     | current server update state: UPDATING_FINAL
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | INFO     | update_server=False
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-27 20:35:46] 2026-05-27 18:35:04,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-27 20:35:46] 2026-05-27 18:35:04,254 | INFO     | found 0 job(s) in 20 queues
[2026-05-27 20:35:46] 2026-05-27 18:35:04,254 | INFO     | aborting loop
[2026-05-27 20:35:46] 2026-05-27 18:35:04,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-27 20:35:46] 2026-05-27 18:35:04,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-27 20:35:46] 2026-05-27 18:35:04,315 | INFO     | all job control threads have been joined
[2026-05-27 20:35:46] 2026-05-27 18:35:04,336 | INFO     | all payload control threads have been joined
[2026-05-27 20:35:46] 2026-05-27 18:35:04,829 | INFO     | all data control threads have been joined
[2026-05-27 20:35:46] 2026-05-27 18:35:05,258 | INFO     | [job] retrieve thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,259 | INFO     | [job] queue monitor thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,259 | INFO     | [job] job monitor thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,320 | INFO     | [job] control thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,341 | INFO     | [payload] control thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,593 | INFO     | [payload] execute_payloads thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,834 | INFO     | [data] control thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,909 | INFO     | [payload] failed_post thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:05,965 | INFO     | job.realtimelogging is not enabled
[2026-05-27 20:35:46] 2026-05-27 18:35:06,021 | INFO     | [payload] validate_post thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,254 | INFO     | [job] validate thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,259 | INFO     | [data] copytool_out thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,348 | INFO     | [job] create_data_payload thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,641 | INFO     | [data] copytool_in thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,692 | INFO     | [payload] validate_pre thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:06,970 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:08,259 | INFO     | [data] queue_monitor thread has finished
[2026-05-27 20:35:46] 2026-05-27 18:35:41,281 | INFO     | [monitor] cgroup control has ended
[2026-05-27 20:35:46] 2026-05-27 18:35:41,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064149248)>']
[2026-05-27 20:35:46] 2026-05-27 18:35:42,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-27 20:35:46] 2026-05-27 18:35:42,443 | INFO     | [monitor] control thread has ended
[2026-05-27 20:35:46] 2026-05-27 18:35:46,715 | INFO     | all workflow threads have been joined
[2026-05-27 20:35:46] 2026-05-27 18:35:46,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-27 20:35:46] 2026-05-27 18:35:46,715 | INFO     | traces error code: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:46,716 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-27 20:35:46] 2026-05-27 18:35:46,770 [wrapper] ==== pilot stdout END ====
[2026-05-27 20:35:46] 2026-05-27 18:35:46,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-27 20:35:46] 2026-05-27 18:35:46,772 [wrapper] pilotpid: 11675
[2026-05-27 20:35:46] 2026-05-27 18:35:46,774 [wrapper] Pilot exit status: 0
[2026-05-27 20:35:46] 2026-05-27 18:35:46,777 [wrapper] pandaids: 7154473726
[2026-05-27 20:35:46] 2026-05-27 18:35:46,798 [wrapper] cleanup supervisor_pilot 19586 11676
[2026-05-27 20:35:46] 2026-05-27 18:35:46,799 [wrapper] Test setup, not cleaning
[2026-05-27 20:35:46] 2026-05-27 18:35:46,800 [wrapper] apfmon messages muted
[2026-05-27 20:35:46] 2026-05-27 18:35:46,801 [wrapper] ==== wrapper stdout END ====
[2026-05-27 20:35:46] 2026-05-27 18:35:46,802 [wrapper] ==== wrapper stderr END ====
[2026-05-27 20:35:46]  *** Error codes and diagnostics ***
[2026-05-27 20:35:46]     "exeErrorCode": 0,
[2026-05-27 20:35:46]     "pilotErrorCode": 0,
[2026-05-27 20:35:46]  *** Listing of results directory ***
[2026-05-27 20:35:46] total 468944
[2026-05-27 20:35:46] -rwx------ 1 mf493845 unix-user     36281 May 27 12:28 runpilot2-wrapper.sh
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      5631 May 27 12:29 queuedata.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    709501 May 27 12:29 pilot3.tar.gz
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       100 May 27 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-27 20:35:46] -rwxr-xr-x 1 mf493845 unix-user      7986 May 27 18:34 run_atlas
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       105 May 27 18:34 job.xml
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user 281993444 May 27 19:46 EVNT.49539717._000149.pool.root.1
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user     15667 May 27 19:46 start_atlas.sh
[2026-05-27 20:35:46] drwxrwx--x 2 mf493845 unix-user       100 May 27 19:46 shared
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user    722758 May 27 19:46 input.tar.gz
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      6307 May 27 19:46 init_data.xml
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user         0 May 27 19:46 boinc_setup_complete
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      8192 May 27 19:46 boinc_mmap_file
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user         0 May 27 19:46 boinc_lockfile
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      2603 May 27 19:46 pandaJob.out
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    996447 May 27 19:46 agis_schedconf.cvmfs.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user         0 May 27 19:46 agis_ddmendpoints.agis.ALL.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user   1251485 May 27 19:46 cric_ddmendpoints.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       420 May 27 19:46 workernode_map.json
[2026-05-27 20:35:46] drwx------ 5 mf493845 unix-user       500 May 27 19:46 pilot3
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user        95 May 27 20:34 pilot_heartbeat.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user 193081367 May 27 20:34 HITS.49545130._003723.pool.root.1
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      1019 May 27 20:34 memory_monitor_summary.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    283408 May 27 20:35 log.49545130._003723.job.log.tgz.1
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      6381 May 27 20:35 heartbeat_new.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      6271 May 27 20:35 heartbeat.json
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      4637 May 27 20:35 pilotlog.txt
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    325196 May 27 20:35 log.49545130._003723.job.log.1
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       357 May 27 20:35 output.list
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       410 May 27 20:35 runtime_log
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    624640 May 27 20:35 result.tar.gz
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user      8842 May 27 20:35 runtime_log.err
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user       641 May 27 20:35 c7517aff69d1.diag
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user     21221 May 27 20:35 stderr.txt
[2026-05-27 20:35:46] HITS file was successfully produced:
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user 193081367 May 27 20:34 shared/HITS.pool.root.1
[2026-05-27 20:35:46]  *** Contents of shared directory: ***
[2026-05-27 20:35:46] total 465284
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user 281993444 May 27 19:46 ATLAS.root_0
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user     15667 May 27 19:46 start_atlas.sh
[2026-05-27 20:35:46] -rw-r--r-- 2 mf493845 unix-user    722758 May 27 19:46 input.tar.gz
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user 193081367 May 27 20:34 HITS.pool.root.1
[2026-05-27 20:35:46] -rw------- 1 mf493845 unix-user    624640 May 27 20:35 result.tar.gz
20:35:48 (6875): run_atlas exited; CPU time 20792.973968
20:35:48 (6875): called boinc_finish(0)

</stderr_txt>
]]>

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