Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:08 (32363): wrapper (7.7.26015): starting
02:46:08 (32363): wrapper: running run_atlas (--nthreads 8)
[2026-05-28 02:46:08] Arguments: --nthreads 8
[2026-05-28 02:46:08] Threads: 8
[2026-05-28 02:46:08] Checking for CVMFS
[2026-05-28 02:46:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-28 02:46:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-28 02:46:10] Running cvmfs_config stat atlas.cern.ch
[2026-05-28 02:46:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-28 02:46:12] 2.11.2.0 30309 60957 104804 159873 3 54 21899176 25165824 1027 130560 0 25817536 99.896 15087489 12748 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-28 02:46:12] CVMFS is ok
[2026-05-28 02:46:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 02:46:12] Checking for apptainer binary...
[2026-05-28 02:46:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-28 02:46:12] Running /usr/bin/apptainer --version
[2026-05-28 02:46:12] apptainer version 1.3.2-1.el7
[2026-05-28 02:46:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 02:46:26] cg-vwn233.simple-grid.lan
[2026-05-28 02:46:26] apptainer works
[2026-05-28 02:46:26] Set ATHENA_PROC_NUMBER=8
[2026-05-28 02:46:26] Set ATHENA_CORE_NUMBER=8
[2026-05-28 02:46:26] Starting ATLAS job with PandaID=7154772806
[2026-05-28 02:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 06:08:19]  *** The last 200 lines of the pilot log: ***
[2026-05-28 06:08:19] 2026-05-28 04:07:27,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,872 | INFO     | log transfer has been attempted: DONE
[2026-05-28 06:08:19] 2026-05-28 04:07:27,872 | INFO     | job 7154772806 has finished - writing final server update
[2026-05-28 06:08:19] 2026-05-28 04:07:27,872 | INFO     | total number of processed events: 400 (read)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,874 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7154772806/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,875 | INFO     | extracted standard info from prmon json
[2026-05-28 06:08:19] 2026-05-28 04:07:27,875 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 06:08:19] 2026-05-28 04:07:27,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 06:08:19] 2026-05-28 04:07:27,876 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 06:08:19] 2026-05-28 04:07:27,879 | INFO     | fitting pss+swap vs Time
[2026-05-28 06:08:19] 2026-05-28 04:07:27,880 | INFO     | sum of square deviations: 2060343747.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,881 | INFO     | sum of deviations: 91635528946.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,882 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,882 | INFO     | mean y: 2409982.914893617
[2026-05-28 06:08:19] 2026-05-28 04:07:27,882 | INFO     | intersect: 2409982.914893617
[2026-05-28 06:08:19] 2026-05-28 04:07:27,882 | INFO     | chi2: 7.234549154369434
[2026-05-28 06:08:19] 2026-05-28 04:07:27,883 | INFO     | sum of square deviations: 1900284932.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,884 | INFO     | sum of deviations: 101241569582.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,884 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,884 | INFO     | mean y: 2418877.1530054645
[2026-05-28 06:08:19] 2026-05-28 04:07:27,885 | INFO     | intersect: 2418877.1530054645
[2026-05-28 06:08:19] 2026-05-28 04:07:27,885 | INFO     | chi2: 6.532976904860763
[2026-05-28 06:08:19] 2026-05-28 04:07:27,886 | INFO     | current chi2=6.532976904860763 (change=9.697525506270756 %)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,886 | INFO     | right removable region: 182
[2026-05-28 06:08:19] 2026-05-28 04:07:27,886 | INFO     | sum of square deviations: 1900284932.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,888 | INFO     | sum of deviations: 27023416691.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,888 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,888 | INFO     | mean y: 2471487.0327868853
[2026-05-28 06:08:19] 2026-05-28 04:07:27,888 | INFO     | intersect: 2471487.0327868853
[2026-05-28 06:08:19] 2026-05-28 04:07:27,888 | INFO     | chi2: 2.2879589841325543
[2026-05-28 06:08:19] 2026-05-28 04:07:27,889 | INFO     | current chi2=2.2879589841325543 (change=68.37454642559582 %)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,889 | INFO     | sum of square deviations: 1748737904.5
[2026-05-28 06:08:19] 2026-05-28 04:07:27,890 | INFO     | sum of deviations: -5824502680.500005
[2026-05-28 06:08:19] 2026-05-28 04:07:27,891 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,891 | INFO     | mean y: 2504294.286516854
[2026-05-28 06:08:19] 2026-05-28 04:07:27,891 | INFO     | intersect: 2504294.286516854
[2026-05-28 06:08:19] 2026-05-28 04:07:27,891 | INFO     | chi2: 0.8329245382806905
[2026-05-28 06:08:19] 2026-05-28 04:07:27,891 | INFO     | current chi2=0.8329245382806905 (change=63.595302885358265 %)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,892 | INFO     | sum of square deviations: 1605470102.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,893 | INFO     | sum of deviations: -7703017963.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,893 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,893 | INFO     | mean y: 2506233.861271676
[2026-05-28 06:08:19] 2026-05-28 04:07:27,893 | INFO     | intersect: 2506233.861271676
[2026-05-28 06:08:19] 2026-05-28 04:07:27,894 | INFO     | chi2: 0.8122752544727665
[2026-05-28 06:08:19] 2026-05-28 04:07:27,894 | INFO     | current chi2=0.8122752544727665 (change=2.479130204345749 %)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,894 | INFO     | left removable region: 15
[2026-05-28 06:08:19] 2026-05-28 04:07:27,894 | INFO     | sum of square deviations: 1444149868.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,896 | INFO     | sum of deviations: 3629042744.0000005
[2026-05-28 06:08:19] 2026-05-28 04:07:27,896 | INFO     | mean x (centered): 0.0
[2026-05-28 06:08:19] 2026-05-28 04:07:27,896 | INFO     | mean y: 2518706.5868263473
[2026-05-28 06:08:19] 2026-05-28 04:07:27,896 | INFO     | intersect: 2518706.5868263473
[2026-05-28 06:08:19] 2026-05-28 04:07:27,896 | INFO     | chi2: 0.01712924051110893
[2026-05-28 06:08:19] 2026-05-28 04:07:27,897 | INFO     | current memory leak: 2.51 B/s (using 167 data points, chi2=0.02)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,897 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-28 06:08:19] 2026-05-28 04:07:27,898 | INFO     | ..............................
[2026-05-28 06:08:19] 2026-05-28 04:07:27,898 | INFO     | . Timing measurements:
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . get job = 0 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . initial setup = 105 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . payload setup = 166 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . stage-in = 0 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . payload execution = 11554 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . stage-out = 1 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | . log creation = 0 s
[2026-05-28 06:08:19] 2026-05-28 04:07:27,899 | INFO     | ..............................
[2026-05-28 06:08:19] 2026-05-28 04:07:28,120 | INFO     | 
[2026-05-28 06:08:19] 2026-05-28 04:07:28,120 | INFO     | job summary report
[2026-05-28 06:08:19] 2026-05-28 04:07:28,120 | INFO     | --------------------------------------------------
[2026-05-28 06:08:19] 2026-05-28 04:07:28,120 | INFO     | PanDA job id: 7154772806
[2026-05-28 06:08:19] 2026-05-28 04:07:28,120 | INFO     | task id: 49545130
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | errors: (none)
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | pilot state: finished 
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | transexitcode: 0
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | exeerrorcode: 0
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | exeerrordiag: 
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | exitcode: 0
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | exitmsg: OK
[2026-05-28 06:08:19] 2026-05-28 04:07:28,121 | INFO     | cpuconsumptiontime: 54614 s
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | nevents: 400
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | neventsw: 0
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | pid: 8422
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | pgrp: 8422
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | corecount: 8
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | event service: False
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | sizes: {0: 2265228, 1: 2265913, 2: 2267742, 11724: 2297209, 11727: 2306207, 11729: 2306263, 11730: 2306585}
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | --------------------------------------------------
[2026-05-28 06:08:19] 2026-05-28 04:07:28,122 | INFO     | 
[2026-05-28 06:08:19] 2026-05-28 04:07:28,123 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-28 06:08:19] 2026-05-28 04:07:28,146 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,146 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,146 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,146 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,148 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 06:08:19] 2026-05-28 04:07:28,149 | INFO     | job 7154772806 has completed (purged errors)
[2026-05-28 06:08:19] 2026-05-28 04:07:28,149 | INFO     | overall cleanup function is called
[2026-05-28 06:08:19] 2026-05-28 04:07:29,157 | INFO     | --- collectZombieJob: --- 10, [8422]
[2026-05-28 06:08:19] 2026-05-28 04:07:29,157 | INFO     | zombie collector waiting for pid 8422
[2026-05-28 06:08:19] 2026-05-28 04:07:29,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 06:08:19] 2026-05-28 04:07:29,158 | INFO     | collected zombie processes
[2026-05-28 06:08:19] 2026-05-28 04:07:29,158 | INFO     | will attempt to kill all subprocesses of pid=8422
[2026-05-28 06:08:19] 2026-05-28 04:07:29,211 | INFO     | process IDs to be killed: [8422] (in reverse order)
[2026-05-28 06:08:19] 2026-05-28 04:07:29,275 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 06:08:19] 2026-05-28 04:07:29,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 06:08:19] 2026-05-28 04:07:29,278 | INFO     | did not find any defunct processes belonging to 8422
[2026-05-28 06:08:19] 2026-05-28 04:07:29,279 | INFO     | did not find any defunct processes belonging to 8422
[2026-05-28 06:08:19] 2026-05-28 04:07:29,280 | INFO     | Ready for new job
[2026-05-28 06:08:19] 2026-05-28 04:07:29,281 | INFO     | ***************************************
[2026-05-28 06:08:19] 2026-05-28 04:07:29,282 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 06:08:19] 2026-05-28 04:07:29,282 | INFO     | ***************************************
[2026-05-28 06:08:19] 2026-05-28 04:07:29,282 | INFO     | 
[2026-05-28 06:08:19] 2026-05-28 04:07:29,282 | INFO     | pilot is running in a VM
[2026-05-28 06:08:19] 2026-05-28 04:07:29,283 | INFO     | architecture information:
[2026-05-28 06:08:19] 2026-05-28 04:07:29,283 | INFO     | executing command: cat /etc/os-release
[2026-05-28 06:08:19] 2026-05-28 04:07:29,301 | INFO     | cat /etc/os-release:
[2026-05-28 06:08:19] NAME="CentOS Linux"
[2026-05-28 06:08:19] VERSION="7 (Core)"
[2026-05-28 06:08:19] ID="centos"
[2026-05-28 06:08:19] ID_LIKE="rhel fedora"
[2026-05-28 06:08:19] VERSION_ID="7"
[2026-05-28 06:08:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 06:08:19] ANSI_COLOR="0;31"
[2026-05-28 06:08:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 06:08:19] HOME_URL="https://www.centos.org/"
[2026-05-28 06:08:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 06:08:19] 
[2026-05-28 06:08:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 06:08:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 06:08:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 06:08:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 06:08:19] 
[2026-05-28 06:08:19] 2026-05-28 04:07:29,301 | INFO     | ***************************************
[2026-05-28 06:08:19] 2026-05-28 04:07:29,805 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-28 06:08:19] 2026-05-28 04:07:29,831 | INFO     | sufficient remaining disk space (497649975296 B)
[2026-05-28 06:08:19] 2026-05-28 04:07:29,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 06:08:19] 2026-05-28 04:07:29,831 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 06:08:19] 2026-05-28 04:07:29,832 | INFO     | update_server=False
[2026-05-28 06:08:19] 2026-05-28 04:07:29,832 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 06:08:19] 2026-05-28 04:07:29,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 06:08:19] 2026-05-28 04:07:29,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 06:08:19] 2026-05-28 04:07:29,833 | INFO     | aborting loop
[2026-05-28 06:08:19] 2026-05-28 04:07:30,058 | INFO     | all data control threads have been joined
[2026-05-28 06:08:19] 2026-05-28 04:07:30,250 | INFO     | all payload control threads have been joined
[2026-05-28 06:08:19] 2026-05-28 04:07:30,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 06:08:19] 2026-05-28 04:07:30,728 | INFO     | all job control threads have been joined
[2026-05-28 06:08:19] 2026-05-28 04:07:30,837 | INFO     | [job] retrieve thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:30,838 | INFO     | [job] queue monitor thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:30,839 | INFO     | [job] job monitor thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:30,971 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,064 | INFO     | [data] control thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,256 | INFO     | [payload] control thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,362 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,571 | INFO     | [payload] validate_post thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,734 | INFO     | [job] control thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,896 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,942 | INFO     | [data] copytool_in thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:31,942 | INFO     | [job] validate thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:32,370 | INFO     | [payload] failed_post thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:32,619 | INFO     | [data] copytool_out thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:33,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 06:08:19] 2026-05-28 04:07:37,181 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:07:40,502 | INFO     | job.realtimelogging is not enabled
[2026-05-28 06:08:19] 2026-05-28 04:07:41,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 06:08:19] 2026-05-28 04:08:00,902 | INFO     | PID=3979 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-28 06:08:19] 2026-05-28 04:08:00,902 | INFO     | .. there are 2 such processes running
[2026-05-28 06:08:19] 2026-05-28 04:08:00,903 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 06:08:19] 2026-05-28 04:08:00,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 06:08:19] 2026-05-28 04:08:00,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 06:08:19] 2026-05-28 04:08:14,457 | INFO     | [monitor] cgroup control has ended
[2026-05-28 06:08:19] 2026-05-28 04:08:14,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192132151104)>', '<ExcThread(monitor, started 140191490635520)>']
[2026-05-28 06:08:19] 2026-05-28 04:08:14,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 06:08:19] 2026-05-28 04:08:14,975 | INFO     | [monitor] control thread has ended
[2026-05-28 06:08:19] 2026-05-28 04:08:19,483 | INFO     | all workflow threads have been joined
[2026-05-28 06:08:19] 2026-05-28 04:08:19,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 06:08:19] 2026-05-28 04:08:19,484 | INFO     | traces error code: 0
[2026-05-28 06:08:19] 2026-05-28 04:08:19,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 06:08:19] 2026-05-28 04:08:19,639 [wrapper] ==== pilot stdout END ====
[2026-05-28 06:08:19] 2026-05-28 04:08:19,649 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 06:08:19] 2026-05-28 04:08:19,654 [wrapper] pilotpid: 3979
[2026-05-28 06:08:19] 2026-05-28 04:08:19,659 [wrapper] Pilot exit status: 0
[2026-05-28 06:08:19] 2026-05-28 04:08:19,682 [wrapper] pandaids: 7154772806
[2026-05-28 06:08:19] 2026-05-28 04:08:19,730 [wrapper] cleanup supervisor_pilot 30014 3980
[2026-05-28 06:08:19] 2026-05-28 04:08:19,736 [wrapper] Test setup, not cleaning
[2026-05-28 06:08:19] 2026-05-28 04:08:19,753 [wrapper] apfmon messages muted
[2026-05-28 06:08:19] 2026-05-28 04:08:19,757 [wrapper] ==== wrapper stdout END ====
[2026-05-28 06:08:19] 2026-05-28 04:08:19,762 [wrapper] ==== wrapper stderr END ====
[2026-05-28 06:08:19]  *** Error codes and diagnostics ***
[2026-05-28 06:08:19]     "exeErrorCode": 0,
[2026-05-28 06:08:19]     "pilotErrorCode": 0,
[2026-05-28 06:08:19]  *** Listing of results directory ***
[2026-05-28 06:08:19] total 456928
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc    709501 May 27 16:09 pilot3.tar.gz
[2026-05-28 06:08:19] -rwx------. 1 boinc boinc     36281 May 27 16:14 runpilot2-wrapper.sh
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc      5631 May 27 16:14 queuedata.json
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc       100 May 28 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 06:08:19] -rwxr-xr-x. 1 boinc boinc      7986 May 28 02:46 run_atlas
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc       105 May 28 02:46 job.xml
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc      6306 May 28 02:46 init_data.xml
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc 279190759 May 28 02:46 EVNT.49539717._000363.pool.root.1
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc     15667 May 28 02:46 start_atlas.sh
[2026-05-28 06:08:19] drwxrwx--x. 2 boinc boinc        68 May 28 02:46 shared
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc    722763 May 28 02:46 input.tar.gz
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc         0 May 28 02:46 boinc_lockfile
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc      2603 May 28 02:46 pandaJob.out
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc   1251485 May 28 02:50 cric_ddmendpoints.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc       415 May 28 02:51 workernode_map.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc    996423 May 28 02:51 agis_schedconf.cvmfs.json
[2026-05-28 06:08:19] drwx------. 5 boinc boinc      4096 May 28 02:51 pilot3
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc       488 May 28 06:06 boinc_task_state.xml
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc 181840109 May 28 06:06 HITS.49545130._009101.pool.root.1
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc      1022 May 28 06:07 memory_monitor_summary.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc         0 May 28 06:07 agis_ddmendpoints.agis.ALL.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc    366290 May 28 06:07 log.49545130._009101.job.log.tgz.1
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc      6385 May 28 06:07 heartbeat_new.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc      6276 May 28 06:07 heartbeat.json
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc        95 May 28 06:07 pilot_heartbeat.json
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc      8192 May 28 06:07 boinc_mmap_file
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc        28 May 28 06:07 wrapper_checkpoint.txt
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc      4954 May 28 06:08 pilotlog.txt
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc   1106687 May 28 06:08 log.49545130._009101.job.log.1
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc       357 May 28 06:08 output.list
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc       410 May 28 06:08 runtime_log
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc   1495040 May 28 06:08 result.tar.gz
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc      8439 May 28 06:08 runtime_log.err
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc       655 May 28 06:08 fc43eba5720a.diag
[2026-05-28 06:08:19] -rw-r--r--. 1 boinc boinc     20603 May 28 06:08 stderr.txt
[2026-05-28 06:08:19] HITS file was successfully produced:
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc 181840109 May 28 06:06 shared/HITS.pool.root.1
[2026-05-28 06:08:19]  *** Contents of shared directory: ***
[2026-05-28 06:08:19] total 452412
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc 279190759 May 28 02:46 ATLAS.root_0
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc     15667 May 28 02:46 start_atlas.sh
[2026-05-28 06:08:19] -rw-r--r--. 2 boinc boinc    722763 May 28 02:46 input.tar.gz
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc 181840109 May 28 06:06 HITS.pool.root.1
[2026-05-28 06:08:19] -rw-------. 1 boinc boinc   1495040 May 28 06:08 result.tar.gz
06:08:21 (32363): run_atlas exited; CPU time 54719.669234
06:08:21 (32363): called boinc_finish(0)

</stderr_txt>
]]>

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