Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-27 18:12:57 (680): vboxwrapper version 26210
2026-05-27 18:12:57 (680): BOINC client version: 7.16.11
2026-05-27 18:12:58 (680): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-05-27 18:12:58 (680): Successfully copied 'init_data.xml' to the shared directory.
2026-05-27 18:12:58 (680): Create VM. (boinc_cb1ba443c997a056, slot#2)
2026-05-27 18:12:59 (680): Setting Memory Size for VM. (4300MB)
2026-05-27 18:12:59 (680): Setting CPU Count for VM. (3)
2026-05-27 18:12:59 (680): Setting Chipset Options for VM.
2026-05-27 18:12:59 (680): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-27 18:13:00 (680): Setting Boot Options for VM.
2026-05-27 18:13:00 (680): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-27 18:13:00 (680): Enabling VM Network Access.
2026-05-27 18:13:01 (680): Disabling USB Support for VM.
2026-05-27 18:13:01 (680): Disabling COM Port Support for VM.
2026-05-27 18:13:01 (680): Disabling LPT Port Support for VM.
2026-05-27 18:13:02 (680): Disabling Audio Support for VM.
2026-05-27 18:13:02 (680): Disabling Clipboard Support for VM.
2026-05-27 18:13:02 (680): Disabling Drag and Drop Support for VM.
2026-05-27 18:13:02 (680): Adding storage controller(s) to VM.
2026-05-27 18:13:03 (680): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-27 18:13:04 (680): Adding VirtualBox Guest Additions to VM.
2026-05-27 18:13:04 (680): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-27 18:13:04 (680): forwarding host port 50197 to guest port 80
2026-05-27 18:13:04 (680): Enabling remote desktop for VM.
2026-05-27 18:13:05 (680): Required extension pack not installed, remote desktop not enabled.
2026-05-27 18:13:05 (680): Enabling shared directory for VM.
2026-05-27 18:13:05 (680): Starting VM using VBoxManage interface. (boinc_cb1ba443c997a056, slot#2)
2026-05-27 18:13:08 (680): Successfully started VM. (PID = '9496')
2026-05-27 18:13:08 (680): Reporting VM Process ID to BOINC.
2026-05-27 18:13:08 (680): Guest Log: BIOS: VirtualBox 6.1.12
2026-05-27 18:13:08 (680): Guest Log: CPUID EDX: 0x178bfbff
2026-05-27 18:13:08 (680): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-27 18:13:08 (680): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-27 18:13:08 (680): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-27 18:13:08 (680): Detected: Web Application Enabled (http://localhost:50197)
2026-05-27 18:13:08 (680): Preference change detected
2026-05-27 18:13:08 (680): Setting CPU throttle for VM. (100%)
2026-05-27 18:13:09 (680): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-27 18:13:10 (680): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-27 18:13:10 (680): Guest Log: BIOS: Booting from Hard Disk...
2026-05-27 18:13:13 (680): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-27 18:13:13 (680): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-27 18:13:13 (680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-27 18:14:02 (680): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-27 18:14:02 (680): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-05-27 18:14:07 (680): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000153 main     Log opened 2026-05-27T18:14:06.266090000Z
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000252 main     OS Product: Linux
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000278 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000298 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000317 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000317 main     Process ID: 1289
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.000318 main     Package type: LINUX_64BITS_GENERIC
2026-05-27 18:14:07 (680): Guest Log: 00:00:00.001310 main     5.2.32 r132073 started. Verbose level = 0
2026-05-27 18:14:07 (680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-27 18:14:07 (680): Guest Log: [INFO] Mounting shared directory
2026-05-27 18:14:07 (680): Guest Log: [INFO] Checking for init_data.xml
2026-05-27 18:14:17 (680): Guest Log: 00:00:10.008999 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 235 742 426 000ns (GuestNow=1 779 898 410 525 984 000 ns GuestLast=1 779 905 646 268 410 000 ns fSetTimeLastLoop=true )
2026-05-27 18:15:08 (680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-27 18:15:08 (680): Guest Log: [INFO] Detected branch: prod
2026-05-27 18:15:08 (680): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-27 18:15:08 (680): Guest Log: Copying input files
2026-05-27 18:15:10 (680): Guest Log: Copied input files into RunAtlas.
2026-05-27 18:15:10 (680): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-27 18:15:10 (680): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-27 18:15:10 (680): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-27 18:15:10 (680): Guest Log: Further information can be found at the LHC@home message board.
2026-05-27 18:15:19 (680): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-27 18:15:19 (680): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-27 18:15:19 (680): Guest Log: 2.6.3.0 1586 0 32180 159863 3 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-27 18:15:19 (680): Guest Log: copied the webapp to /var/www
2026-05-27 18:15:20 (680): Guest Log: ATHENA_PROC_NUMBER=3
2026-05-27 18:15:20 (680): Guest Log: ATHENA_CORE_NUMBER=3
2026-05-27 18:15:20 (680): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-27 18:15:20 (680): Guest Log:  *** Starting ATLAS job. (PandaID=7154563333 taskID=49545130) ***
2026-05-27 19:53:45 (680): Status Report: Elapsed Time: '6000.995319'
2026-05-27 19:53:45 (680): Status Report: CPU Time: '16857.531250'
2026-05-27 21:34:22 (680): Status Report: Elapsed Time: '12000.995319'
2026-05-27 21:34:22 (680): Status Report: CPU Time: '34954.968750'
2026-05-27 21:38:34 (680): Guest Log:  *** Job finished ***
2026-05-27 21:38:34 (680): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:39,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:39,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:42,433 | INFO     | [monitor] cgroup control has ended
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:43,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202521667392)>', '<ExcThread(monitor, started 140201951225600)>']
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:43,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:43,903 | INFO     | [monitor] control thread has ended
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,120 | INFO     | all workflow threads have been joined
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,121 | INFO     | end of generic workflow (traces error code: 0)
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,121 | INFO     | traces error code: 0
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,247 [wrapper] ==== pilot stdout END ====
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,252 [wrapper] ==== wrapper stdout RESUME ====
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,257 [wrapper] pilotpid: 5968
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,262 [wrapper] Pilot exit status: 0
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,820 [wrapper] pandaids: 7154563333
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,862 [wrapper] cleanup supervisor_pilot 27538 5969
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,867 [wrapper] Test setup, not cleaning
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,873 [wrapper] apfmon messages muted
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,878 [wrapper] ==== wrapper stdout END ====
2026-05-27 21:38:34 (680): Guest Log: 2026-05-27 19:37:48,883 [wrapper] ==== wrapper stderr END ====
2026-05-27 21:38:34 (680): Guest Log:  *** Error codes and diagnostics ***
2026-05-27 21:38:34 (680): Guest Log:     "exeErrorCode": 0,
2026-05-27 21:38:34 (680): Guest Log:     "pilotErrorCode": 0,
2026-05-27 21:38:34 (680): Guest Log:  *** Listing of results directory ***
2026-05-27 21:38:34 (680): Guest Log: total 190112
2026-05-27 21:38:34 (680): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 27 12:09 pilot3.tar.gz
2026-05-27 21:38:34 (680): Guest Log: -rwx------. 1 atlas atlas     36281 May 27 12:13 runpilot2-wrapper.sh
2026-05-27 21:38:34 (680): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 27 12:13 queuedata.json
2026-05-27 21:38:34 (680): Guest Log: -rwxr-xr-x. 1 atlas atlas      8755 May 27 16:14 init_data.xml
2026-05-27 21:38:34 (680): Guest Log: -rwxr-xr-x. 1 atlas atlas    722755 May 27 16:14 input.tar.gz
2026-05-27 21:38:34 (680): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 27 16:14 start_atlas.sh
2026-05-27 21:38:34 (680): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 27 16:14 EVNT.49539717._000233.pool.root.1 -> /data/./ATLAS.root_0
2026-05-27 21:38:34 (680): Guest Log: -rw-r--r--. 1 atlas atlas      2603 May 27 16:14 pandaJob.out
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas    996447 May 27 16:15 agis_schedconf.cvmfs.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas   1251485 May 27 16:15 cric_ddmendpoints.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas       424 May 27 16:15 workernode_map.json
2026-05-27 21:38:34 (680): Guest Log: drwx------. 5 atlas atlas      4096 May 27 16:15 pilot3
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas 188004273 May 27 19:36 HITS.49545130._005822.pool.root.1
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas        95 May 27 19:36 pilot_heartbeat.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas      1030 May 27 19:36 memory_monitor_summary.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas         0 May 27 19:37 agis_ddmendpoints.agis.ALL.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas    290257 May 27 19:37 log.49545130._005822.job.log.tgz.1
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas      6437 May 27 19:37 heartbeat_new.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas      6328 May 27 19:37 heartbeat.json
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas      4804 May 27 19:37 pilotlog.txt
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas   1115914 May 27 19:37 log.49545130._005822.job.log.1
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas       357 May 27 19:37 output.list
2026-05-27 21:38:34 (680): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 27 19:37 runtime_log
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas   1423360 May 27 19:37 result.tar.gz
2026-05-27 21:38:34 (680): Guest Log: -rw-r--r--. 1 atlas atlas      8369 May 27 19:37 runtime_log.err
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas       655 May 27 19:37 dfcf281355ad.diag
2026-05-27 21:38:34 (680): Guest Log: Looking for outputfile HITS.49545130._005822.pool.root.1
2026-05-27 21:38:34 (680): Guest Log: HITS file was successfully produced
2026-05-27 21:38:34 (680): Guest Log: -rw-------. 1 atlas atlas 188004273 May 27 19:36 /home/atlas/RunAtlas/HITS.49545130._005822.pool.root.1
2026-05-27 21:38:34 (680): Guest Log: Successfully finished the ATLAS job!
2026-05-27 21:38:34 (680): Guest Log: Copying the results back to the shared directory!
2026-05-27 21:38:35 (680): Guest Log:  *** Contents of shared directory: ***
2026-05-27 21:38:35 (680): Guest Log: total 460460
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root 281323194 May 27 16:12 ATLAS.root_0
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root 188004273 May 27  2026 HITS.pool.root.1
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root      8755 May 27 16:12 init_data.xml
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root    722755 May 27 16:01 input.tar.gz
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root   1423360 May 27  2026 result.tar.gz
2026-05-27 21:38:35 (680): Guest Log: -rwxrwxrwx. 1 root root     15667 May 27 16:01 start_atlas.sh
2026-05-27 21:38:35 (680): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-27 21:38:35 (680): VM Completion File Detected.
2026-05-27 21:38:35 (680): Powering off VM.
2026-05-27 21:38:36 (680): Successfully stopped VM.
2026-05-27 21:38:36 (680): Deregistering VM. (boinc_cb1ba443c997a056, slot#2)
2026-05-27 21:38:36 (680): Removing network bandwidth throttle group from VM.
2026-05-27 21:38:36 (680): Removing VM from VirtualBox.
2026-05-27 21:38:41 (680): called boinc_finish(0)

</stderr_txt>
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