Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:26 (114222): wrapper (7.7.26015): starting
19:23:26 (114222): wrapper: running run_atlas (--nthreads 4)
[2026-05-27 19:23:26] Arguments: --nthreads 4
[2026-05-27 19:23:26] Threads: 4
[2026-05-27 19:23:26] Checking for CVMFS
[2026-05-27 19:23:26] No cvmfs_config command found, will try listing directly
[2026-05-27 19:23:26] CVMFS is ok
[2026-05-27 19:23:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 19:23:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 19:23:26] Further information can be found at the LHC@home message board.
[2026-05-27 19:23:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 19:23:26] Checking for apptainer binary...
[2026-05-27 19:23:26] which: no apptainer in ((null))
[2026-05-27 19:23:26] apptainer is not installed, using version from CVMFS
[2026-05-27 19:23:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 19:23:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-27 19:23:26] apptainer works
[2026-05-27 19:23:26] Set ATHENA_PROC_NUMBER=4
[2026-05-27 19:23:26] Set ATHENA_CORE_NUMBER=4
[2026-05-27 19:23:26] Starting ATLAS job with PandaID=7154562997
[2026-05-27 19:23:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-27 22:15:04]  *** The last 200 lines of the pilot log: ***
[2026-05-27 22:15:04] 2026-05-27 20:13:58,776 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7154562997/jobReport.json
[2026-05-27 22:15:04] 2026-05-27 20:13:58,778 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/1/workernode_map.json
[2026-05-27 22:15:04] 2026-05-27 20:13:58,778 | INFO     | this job has now completed (state=finished)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,779 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,779 | INFO     | log transfer has been attempted: DONE
[2026-05-27 22:15:04] 2026-05-27 20:13:58,779 | INFO     | job 7154562997 has finished - writing final server update
[2026-05-27 22:15:04] 2026-05-27 20:13:58,779 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1219202/.job.ad'
[2026-05-27 22:15:04] 2026-05-27 20:13:58,780 | INFO     | total number of processed events: 400 (read)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,792 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7154562997/memory_monitor_summary.json (trf name=prmon)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,793 | INFO     | extracted standard info from prmon json
[2026-05-27 22:15:04] 2026-05-27 20:13:58,793 | INFO     | extracted standard memory fields from prmon json
[2026-05-27 22:15:04] 2026-05-27 20:13:58,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-27 22:15:04] 2026-05-27 20:13:58,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-27 22:15:04] 2026-05-27 20:13:58,796 | INFO     | fitting pss+swap vs Time
[2026-05-27 22:15:04] 2026-05-27 20:13:58,797 | INFO     | sum of square deviations: 1444149868.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,798 | INFO     | sum of deviations: -19483445567.000008
[2026-05-27 22:15:04] 2026-05-27 20:13:58,798 | INFO     | mean x (centered): 0.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,798 | INFO     | mean y: 2382600.622754491
[2026-05-27 22:15:04] 2026-05-27 20:13:58,798 | INFO     | intersect: 2382600.622754491
[2026-05-27 22:15:04] 2026-05-27 20:13:58,798 | INFO     | chi2: 1.48528686419319
[2026-05-27 22:15:04] 2026-05-27 20:13:58,799 | INFO     | sum of square deviations: 1318277740.5
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | sum of deviations: -18656973952.000004
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | mean x (centered): 0.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | mean y: 2383602.814814815
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | intersect: 2383602.814814815
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | chi2: 1.4816334450252733
[2026-05-27 22:15:04] 2026-05-27 20:13:58,800 | INFO     | current chi2=1.4816334450252733 (change=0.24597397687895597 %)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,801 | INFO     | right removable region: 161
[2026-05-27 22:15:04] 2026-05-27 20:13:58,801 | INFO     | sum of square deviations: 1318277740.5
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | sum of deviations: -37944866664.49999
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | mean x (centered): 0.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | mean y: 2404517.388888889
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | intersect: 2404517.388888889
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | chi2: 0.18619719551537509
[2026-05-27 22:15:04] 2026-05-27 20:13:58,802 | INFO     | current chi2=0.18619719551537509 (change=87.46388997276175 %)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,803 | INFO     | sum of square deviations: 1199940638.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | sum of deviations: -31705301501.000004
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | mean x (centered): 0.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | mean y: 2396470.9044585987
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | intersect: 2396470.9044585987
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | chi2: 0.17435651278416775
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | current chi2=0.17435651278416775 (change=6.3592164739289 %)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,804 | INFO     | left removable region: 10
[2026-05-27 22:15:04] 2026-05-27 20:13:58,805 | INFO     | sum of square deviations: 1067554900.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | sum of deviations: -30370197002.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | mean x (centered): 0.0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | mean y: 2398318.218543046
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | intersect: 2398318.218543046
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | chi2: 0.16761710675239694
[2026-05-27 22:15:04] 2026-05-27 20:13:58,806 | INFO     | current memory leak: -28.45 B/s (using 151 data points, chi2=0.17)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,807 | INFO     | could have reported an average CPU frequency of 2575 MHz (9 samples)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,807 | INFO     | ..............................
[2026-05-27 22:15:04] 2026-05-27 20:13:58,807 | INFO     | . Timing measurements:
[2026-05-27 22:15:04] 2026-05-27 20:13:58,807 | INFO     | . get job = 0 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . initial setup = 5 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . payload setup = 9 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . stage-in = 0 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . payload execution = 10188 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . stage-out = 0 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | . log creation = 0 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,808 | INFO     | ..............................
[2026-05-27 22:15:04] 2026-05-27 20:13:58,902 | INFO     | 
[2026-05-27 22:15:04] 2026-05-27 20:13:58,902 | INFO     | job summary report
[2026-05-27 22:15:04] 2026-05-27 20:13:58,902 | INFO     | --------------------------------------------------
[2026-05-27 22:15:04] 2026-05-27 20:13:58,902 | INFO     | PanDA job id: 7154562997
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | task id: 49545130
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | errors: (none)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | pilot state: finished 
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | transexitcode: 0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | exeerrorcode: 0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | exeerrordiag: 
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | exitcode: 0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | exitmsg: OK
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | cpuconsumptiontime: 39528 s
[2026-05-27 22:15:04] 2026-05-27 20:13:58,903 | INFO     | nevents: 400
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | neventsw: 0
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | pid: 123208
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | pgrp: 123208
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | corecount: 4
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | event service: False
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | sizes: {0: 2266123, 1: 2267725, 11: 2267725, 10202: 2296338, 10204: 2305414, 10205: 2305616}
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | --------------------------------------------------
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | 
[2026-05-27 22:15:04] 2026-05-27 20:13:58,904 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-05-27 22:15:04] 2026-05-27 20:13:58,929 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-27 22:15:04] 2026-05-27 20:13:58,931 | INFO     | job 7154562997 has completed (purged errors)
[2026-05-27 22:15:04] 2026-05-27 20:13:58,932 | INFO     | overall cleanup function is called
[2026-05-27 22:15:04] 2026-05-27 20:13:59,229 | WARNING  | process 123208 can no longer be monitored (due to stat problems) - aborting
[2026-05-27 22:15:04] 2026-05-27 20:13:59,519 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-27 22:15:04] 2026-05-27 20:13:59,824 | INFO     | number of running child processes to parent process 123208: 1
[2026-05-27 22:15:04] 2026-05-27 20:13:59,824 | INFO     | maximum number of monitored processes: 6
[2026-05-27 22:15:04] 2026-05-27 20:13:59,824 | INFO     | aborting job monitoring since job object (job id=7154562997) has expired
[2026-05-27 22:15:04] 2026-05-27 20:13:59,943 | INFO     | --- collectZombieJob: --- 10, [123208]
[2026-05-27 22:15:04] 2026-05-27 20:13:59,943 | INFO     | zombie collector waiting for pid 123208
[2026-05-27 22:15:04] 2026-05-27 20:13:59,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-27 22:15:04] 2026-05-27 20:13:59,943 | INFO     | collected zombie processes
[2026-05-27 22:15:04] 2026-05-27 20:13:59,944 | INFO     | will attempt to kill all subprocesses of pid=123208
[2026-05-27 22:15:04] 2026-05-27 20:14:00,248 | INFO     | process IDs to be killed: [123208] (in reverse order)
[2026-05-27 22:15:04] 2026-05-27 20:14:00,375 | WARNING  | found no corresponding commands to process id(s)
[2026-05-27 22:15:04] 2026-05-27 20:14:00,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-27 22:15:04] 2026-05-27 20:14:00,388 | INFO     | did not find any defunct processes belonging to 123208
[2026-05-27 22:15:04] 2026-05-27 20:14:00,400 | INFO     | did not find any defunct processes belonging to 123208
[2026-05-27 22:15:04] 2026-05-27 20:14:00,401 | INFO     | Ready for new job
[2026-05-27 22:15:04] 2026-05-27 20:14:00,403 | INFO     | ***************************************
[2026-05-27 22:15:04] 2026-05-27 20:14:00,403 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-27 22:15:04] 2026-05-27 20:14:00,403 | INFO     | ***************************************
[2026-05-27 22:15:04] 2026-05-27 20:14:00,403 | INFO     | 
[2026-05-27 22:15:04] 2026-05-27 20:14:00,407 | INFO     | architecture information:
[2026-05-27 22:15:04] 2026-05-27 20:14:00,407 | INFO     | executing command: cat /etc/os-release
[2026-05-27 22:15:04] 2026-05-27 20:14:00,424 | INFO     | cat /etc/os-release:
[2026-05-27 22:15:04] NAME="CentOS Linux"
[2026-05-27 22:15:04] VERSION="7 (Core)"
[2026-05-27 22:15:04] ID="centos"
[2026-05-27 22:15:04] ID_LIKE="rhel fedora"
[2026-05-27 22:15:04] VERSION_ID="7"
[2026-05-27 22:15:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-27 22:15:04] ANSI_COLOR="0;31"
[2026-05-27 22:15:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-27 22:15:04] HOME_URL="https://www.centos.org/"
[2026-05-27 22:15:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-27 22:15:04] 
[2026-05-27 22:15:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-27 22:15:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-27 22:15:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-27 22:15:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-27 22:15:04] 
[2026-05-27 22:15:04] 2026-05-27 20:14:00,424 | INFO     | ***************************************
[2026-05-27 22:15:04] 2026-05-27 20:14:00,927 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-05-27 22:15:04] 2026-05-27 20:14:00,942 | INFO     | sufficient remaining disk space (63966281728 B)
[2026-05-27 22:15:04] 2026-05-27 20:14:00,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-27 22:15:04] 2026-05-27 20:14:00,943 | INFO     | current server update state: UPDATING_FINAL
[2026-05-27 22:15:04] 2026-05-27 20:14:00,943 | INFO     | update_server=False
[2026-05-27 22:15:04] 2026-05-27 20:14:00,943 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-27 22:15:04] 2026-05-27 20:14:00,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-27 22:15:04] 2026-05-27 20:14:00,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-27 22:15:04] 2026-05-27 20:14:00,944 | INFO     | aborting loop
[2026-05-27 22:15:04] 2026-05-27 20:14:01,260 | INFO     | all data control threads have been joined
[2026-05-27 22:15:04] 2026-05-27 20:14:01,366 | INFO     | all job control threads have been joined
[2026-05-27 22:15:04] 2026-05-27 20:14:01,800 | INFO     | all payload control threads have been joined
[2026-05-27 22:15:04] 2026-05-27 20:14:01,948 | INFO     | [job] retrieve thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:01,949 | INFO     | [job] job monitor thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:01,980 | INFO     | [data] copytool_in thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,265 | INFO     | [data] control thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,368 | INFO     | [job] control thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,753 | INFO     | [payload] execute_payloads thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,805 | INFO     | [payload] control thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,857 | INFO     | [job] validate thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:02,950 | INFO     | [data] copytool_out thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,214 | INFO     | [job] create_data_payload thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,246 | INFO     | [payload] validate_post thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,250 | INFO     | [payload] validate_pre thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,406 | INFO     | [payload] failed_post thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:03,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-27 22:15:04] 2026-05-27 20:14:04,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-27 22:15:04] 2026-05-27 20:14:04,917 | INFO     | [job] queue monitor thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:08,356 | INFO     | [data] queue_monitor thread has finished
[2026-05-27 22:15:04] 2026-05-27 20:14:30,518 | INFO     | PID=118363 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-27 22:15:04] 2026-05-27 20:14:30,519 | INFO     | .. there are 12 such processes running
[2026-05-27 22:15:04] 2026-05-27 20:14:30,520 | INFO     | found 0 job(s) in 20 queues
[2026-05-27 22:15:04] 2026-05-27 20:14:30,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-27 22:15:04] 2026-05-27 20:14:30,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-27 22:15:04] 2026-05-27 20:14:58,736 | INFO     | [monitor] cgroup control has ended
[2026-05-27 22:15:04] 2026-05-27 20:14:59,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22687224158016)>', '<ExcThread(monitor, started 22686985365248)>']
[2026-05-27 22:15:04] 2026-05-27 20:14:59,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-27 22:15:04] 2026-05-27 20:14:59,647 | INFO     | [monitor] control thread has ended
[2026-05-27 22:15:04] 2026-05-27 20:15:04,241 | INFO     | all workflow threads have been joined
[2026-05-27 22:15:04] 2026-05-27 20:15:04,241 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-27 22:15:04] 2026-05-27 20:15:04,241 | INFO     | traces error code: 0
[2026-05-27 22:15:04] 2026-05-27 20:15:04,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-27 22:15:04] 2026-05-27 20:15:04,370 [wrapper] ==== pilot stdout END ====
[2026-05-27 22:15:04] 2026-05-27 20:15:04,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-27 22:15:04] 2026-05-27 20:15:04,376 [wrapper] pilotpid: 118363
[2026-05-27 22:15:04] 2026-05-27 20:15:04,379 [wrapper] Pilot exit status: 0
[2026-05-27 22:15:04] 2026-05-27 20:15:04,390 [wrapper] pandaids: 7154562997
[2026-05-27 22:15:04] 2026-05-27 20:15:04,467 [wrapper] cleanup supervisor_pilot  334426 118364
[2026-05-27 22:15:04] 2026-05-27 20:15:04,471 [wrapper] Test setup, not cleaning
[2026-05-27 22:15:04] 2026-05-27 20:15:04,474 [wrapper] apfmon messages muted
[2026-05-27 22:15:04] 2026-05-27 20:15:04,477 [wrapper] ==== wrapper stdout END ====
[2026-05-27 22:15:04] 2026-05-27 20:15:04,479 [wrapper] ==== wrapper stderr END ====
[2026-05-27 22:15:04]  *** Error codes and diagnostics ***
[2026-05-27 22:15:04]     "exeErrorCode": 0,
[2026-05-27 22:15:04]     "pilotErrorCode": 0,
[2026-05-27 22:15:04]  *** Listing of results directory ***
[2026-05-27 22:15:04] total 461544
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc    709501 May 27 14:09 pilot3.tar.gz
[2026-05-27 22:15:04] -rwx------. 1 boinc boinc     36281 May 27 14:13 runpilot2-wrapper.sh
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc      5631 May 27 14:13 queuedata.json
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc       100 May 27 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-27 22:15:04] -rwxr-xr-x. 1 boinc boinc      7986 May 27 18:23 run_atlas
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc       105 May 27 18:23 job.xml
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc 281168868 May 27 19:23 EVNT.49539717._000226.pool.root.1
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc      6482 May 27 19:23 init_data.xml
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc     15667 May 27 19:23 start_atlas.sh
[2026-05-27 22:15:04] drwxrwx--x. 2 boinc boinc      4096 May 27 19:23 shared
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc    722756 May 27 19:23 input.tar.gz
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc         0 May 27 19:23 boinc_lockfile
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc      2603 May 27 19:23 pandaJob.out
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc    996447 May 27 19:23 agis_schedconf.cvmfs.json
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc         0 May 27 19:23 agis_ddmendpoints.agis.ALL.json
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc   1251485 May 27 19:23 cric_ddmendpoints.json
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc       452 May 27 19:23 workernode_map.json
[2026-05-27 22:15:04] drwx------. 5 boinc boinc      4096 May 27 19:23 pilot3
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc 184981358 May 27 22:13 HITS.49545130._005652.pool.root.1
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc        95 May 27 22:13 pilot_heartbeat.json
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc       488 May 27 22:13 boinc_task_state.xml
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc      1033 May 27 22:13 memory_monitor_summary.json
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc    298675 May 27 22:13 log.49545130._005652.job.log.tgz.1
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc      6468 May 27 22:13 heartbeat_new.json
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc      6359 May 27 22:13 heartbeat.json
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc      8192 May 27 22:14 boinc_mmap_file
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc        28 May 27 22:14 wrapper_checkpoint.txt
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc      4831 May 27 22:15 pilotlog.txt
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc    973730 May 27 22:15 log.49545130._005652.job.log.1
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc       357 May 27 22:15 output.list
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc       410 May 27 22:15 runtime_log
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc   1290240 May 27 22:15 result.tar.gz
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc      8828 May 27 22:15 runtime_log.err
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc       664 May 27 22:15 dfcf3f0a1534.diag
[2026-05-27 22:15:04] -rw-r--r--. 1 boinc boinc     21098 May 27 22:15 stderr.txt
[2026-05-27 22:15:04] HITS file was successfully produced:
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc 184981358 May 27 22:13 shared/HITS.pool.root.1
[2026-05-27 22:15:04]  *** Contents of shared directory: ***
[2026-05-27 22:15:04] total 457220
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc 281168868 May 27 19:23 ATLAS.root_0
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc     15667 May 27 19:23 start_atlas.sh
[2026-05-27 22:15:04] -rw-r--r--. 2 boinc boinc    722756 May 27 19:23 input.tar.gz
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc 184981358 May 27 22:13 HITS.pool.root.1
[2026-05-27 22:15:04] -rw-------. 1 boinc boinc   1290240 May 27 22:15 result.tar.gz
22:15:06 (114222): run_atlas exited; CPU time 39881.364601
22:15:06 (114222): called boinc_finish(0)

</stderr_txt>
]]>

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