Name 21c7bdd0d562_0
Workunit 241582520
Created 26 May 2026, 22:44:39 UTC
Sent 27 May 2026, 1:40:42 UTC
Report deadline 4 Jun 2026, 1:40:42 UTC
Received 27 May 2026, 23:46:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11039200
Run time 31 min 50 sec
CPU time 4 hours 50 min 41 sec
Priority 28
Validate state Valid
Credit 511.17
Device peak FLOPS 81.87 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.83 GB
Peak swap size 3.22 GB
Peak disk usage 957.67 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:51 (1480067): wrapper (7.7.26015): starting
03:40:51 (1480067): wrapper: running run_atlas (--nthreads 12)
[2026-05-27 03:40:51] Arguments: --nthreads 12
[2026-05-27 03:40:51] Threads: 12
[2026-05-27 03:40:51] Checking for CVMFS
[2026-05-27 03:40:51] No cvmfs_config command found, will try listing directly
[2026-05-27 03:40:51] CVMFS is ok
[2026-05-27 03:40:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 03:40:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 03:40:51] Further information can be found at the LHC@home message board.
[2026-05-27 03:40:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 03:40:51] Checking for apptainer binary...
[2026-05-27 03:40:51] which: no apptainer in ((null))
[2026-05-27 03:40:51] apptainer is not installed, using version from CVMFS
[2026-05-27 03:40:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 03:40:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-27 03:40:52] apptainer works
[2026-05-27 03:40:52] Set ATHENA_PROC_NUMBER=12
[2026-05-27 03:40:52] Set ATHENA_CORE_NUMBER=12
[2026-05-27 03:40:52] Starting ATLAS job with PandaID=7154080335
[2026-05-27 03:40:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:55:01 (2150573): wrapper (7.7.26015): starting
23:55:01 (2150573): wrapper: running run_atlas (--nthreads 12)
[2026-05-27 23:55:01] Arguments: --nthreads 12
[2026-05-27 23:55:01] Threads: 12
[2026-05-27 23:55:01] This job has been restarted, cleaning up previous attempt
[2026-05-27 23:55:01] Checking for CVMFS
[2026-05-27 23:55:01] No cvmfs_config command found, will try listing directly
[2026-05-27 23:55:01] CVMFS is ok
[2026-05-27 23:55:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-27 23:55:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-27 23:55:01] Further information can be found at the LHC@home message board.
[2026-05-27 23:55:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-27 23:55:01] Checking for apptainer binary...
[2026-05-27 23:55:01] which: no apptainer in ((null))
[2026-05-27 23:55:01] apptainer is not installed, using version from CVMFS
[2026-05-27 23:55:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-27 23:55:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-27 23:55:01] apptainer works
[2026-05-27 23:55:01] Set ATHENA_PROC_NUMBER=12
[2026-05-27 23:55:01] Set ATHENA_CORE_NUMBER=12
[2026-05-27 23:55:01] Starting ATLAS job with PandaID=7154080335
[2026-05-27 23:55:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-27 23:58:05] Job failed
[2026-05-27 23:58:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot60/slots/30/
[2026-05-27 23:58:05] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot60/slots/30/
[2026-05-27 23:58:05] + mv ATLAS.root_0 EVNT.49539704._000579.pool.root.1
[2026-05-27 23:58:05] mv: 'ATLAS.root_0' and 'EVNT.49539704._000579.pool.root.1' are the same file
[2026-05-27 23:58:05] + tar --strip-components=5 -xvf input.tar.gz
[2026-05-27 23:58:05] + umask 077
[2026-05-27 23:58:05] ++ date +%s
[2026-05-27 23:58:05] + ACCOUNTING_STARTTIME=1779918901
[2026-05-27 23:58:05] + echo 'Detecting resource accounting method available for the job.'
[2026-05-27 23:58:05] Detecting resource accounting method available for the job.
[2026-05-27 23:58:05] + JOB_ACCOUNTING=
[2026-05-27 23:58:05] + command -v arc-job-cgroup
[2026-05-27 23:58:05] + '[' -z '' ']'
[2026-05-27 23:58:05] + GNU_TIME=/usr/bin/time
[2026-05-27 23:58:05] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-05-27 23:58:05] Looking for /usr/bin/time tool for accounting measurements
[2026-05-27 23:58:05] + '[' '!' -z /usr/bin/time ']'
[2026-05-27 23:58:05] + /usr/bin/time --version
[2026-05-27 23:58:05] + echo 'GNU time found and will be used for job accounting.'
[2026-05-27 23:58:05] GNU time found and will be used for job accounting.
[2026-05-27 23:58:05] + JOB_ACCOUNTING=gnutime
[2026-05-27 23:58:05] + '[' -z gnutime ']'
[2026-05-27 23:58:05] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-05-27 23:58:05] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-05-27 23:58:05] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-05-26/BOINC_MCORE/7154080335.out
[2026-05-27 23:58:05] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-05-26/BOINC_MCORE/7154080335.out
[2026-05-27 23:58:05] + export PILOT_NOKILL=YES
[2026-05-27 23:58:05] + PILOT_NOKILL=YES
[2026-05-27 23:58:05] + export GRID_GLOBAL_JOBID=21c7bdd0d562
[2026-05-27 23:58:05] + GRID_GLOBAL_JOBID=21c7bdd0d562
[2026-05-27 23:58:05] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/21c7bdd0d562
[2026-05-27 23:58:05] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/21c7bdd0d562
[2026-05-27 23:58:05] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-05-27 23:58:05] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-05-27 23:58:05] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-05-27 23:58:05] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot60/slots/30
[2026-05-27 23:58:05] + RUNTIME_JOB_STDIN=/dev/null
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot60/slots/30/log.49545126._014660.job.log.1
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot60/slots/30/log.49545126._014660.job.log.1
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot60/slots/30.diag
[2026-05-27 23:58:05] + '[' '!' -z '' ']'
[2026-05-27 23:58:05] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-05-27 23:58:05] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-05-27 23:58:05] + RUNTIME_FRONTEND_SEES_NODE=
[2026-05-27 23:58:05] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-05-27 23:58:05] + '[' '!' -z '' ']'
[2026-05-27 23:58:05] + '[' -z yes ']'
[2026-05-27 23:58:05] ++ pwd
[2026-05-27 23:58:05] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot60/slots/30/21c7bdd0d562.diag
[2026-05-27 23:58:05] + runtimeenvironments=
[2026-05-27 23:58:05] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-05-27 23:58:05] + RTE_function_0 1
[2026-05-27 23:58:05] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-27 23:58:05] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-27 23:58:05] + export BOINC_APP=ATLAS
[2026-05-27 23:58:05] + BOINC_APP=ATLAS
[2026-05-27 23:58:05] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-27 23:58:05] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-27 23:58:05] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-27 23:58:05] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-27 23:58:05] + '[' -z 1 ']'
[2026-05-27 23:58:05] + '[' 1 == 1 ']'
[2026-05-27 23:58:05] + shift
[2026-05-27 23:58:05] + export SITE_NAME=BOINC
[2026-05-27 23:58:05] + SITE_NAME=BOINC
[2026-05-27 23:58:05] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot60/slots/30/
[2026-05-27 23:58:05] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot60/slots/30/
[2026-05-27 23:58:05] + '[' -e /var/lib/boinc/var/slot60/slots/30/init_data.xml ']'
[2026-05-27 23:58:05] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot60/slots/30/init_data.xml
[2026-05-27 23:58:05] + '[' 0 -ne 0 ']'
[2026-05-27 23:58:05] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-05-27 23:58:05] + '[' -f /etc/os-release ']'
[2026-05-27 23:58:05] +++ cat /etc/os-release
[2026-05-27 23:58:05] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-05-27 23:58:05] +++ NAME='CentOS Linux'
[2026-05-27 23:58:05] +++ VERSION='7 (Core)'
[2026-05-27 23:58:05] +++ ID=centos
[2026-05-27 23:58:05] +++ ID_LIKE='rhel fedora'
[2026-05-27 23:58:05] +++ VERSION_ID=7
[2026-05-27 23:58:05] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-05-27 23:58:05] +++ ANSI_COLOR='0;31'
[2026-05-27 23:58:05] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-05-27 23:58:05] +++ HOME_URL=https://www.centos.org/
[2026-05-27 23:58:05] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-05-27 23:58:05] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-05-27 23:58:05] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-05-27 23:58:05] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-05-27 23:58:05] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-05-27 23:58:05] ++ echo 'CentOS Linux 7 (Core)'
[2026-05-27 23:58:05] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-05-27 23:58:05] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-05-27 23:58:05] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-05-27 23:58:05] + HOME=/var/lib/boinc/var/slot60/slots/30
[2026-05-27 23:58:05] + export HOME
[2026-05-27 23:58:05] + cd /var/lib/boinc/var/slot60/slots/30
[2026-05-27 23:58:05] + '[' '!' -z '' ']'
[2026-05-27 23:58:05] + '[' -z '' ']'
[2026-05-27 23:58:05] ++ /bin/hostname -f
[2026-05-27 23:58:05] + nodename=skurut29.grid.cesnet.cz
[2026-05-27 23:58:05] + echo nodename=skurut29.grid.cesnet.cz
[2026-05-27 23:58:05] + echo Processors=2
[2026-05-27 23:58:05] + echo Nodecount=1
[2026-05-27 23:58:05] + echo Benchmark=HEPSPEC:1.0
[2026-05-27 23:58:05] + executable=./runpilot2-wrapper.sh
[2026-05-27 23:58:05] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-05-27 23:58:05] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-05-27 23:58:05] ++ head -n 1
[2026-05-27 23:58:05] ++ tr -d '\0'
[2026-05-27 23:58:05] + line1='#!/bin/bash'
[2026-05-27 23:58:05] ++ echo '#!/bin/bash'
[2026-05-27 23:58:05] ++ sed -n 's/^#! *//p'
[2026-05-27 23:58:05] + shebang=/bin/bash
[2026-05-27 23:58:05] ++ echo /bin/bash
[2026-05-27 23:58:05] ++ awk '{print $1}'
[2026-05-27 23:58:05] + interpreter=/bin/bash
[2026-05-27 23:58:05] + '[' /bin/bash = /usr/bin/env ']'
[2026-05-27 23:58:05] + '[' x/bin/bash = x ']'
[2026-05-27 23:58:05] + type /bin/bash
[2026-05-27 23:58:05] + '[' xgnutime = xgnutime ']'
[2026-05-27 23:58:05] + /usr/bin/time -o /var/lib/boinc/var/slot60/slots/30/21c7bdd0d562.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.13.1.30 -z -t --piloturl local --mute --container
[2026-05-27 23:58:05] + RESULT=2
[2026-05-27 23:58:05] + sed -i -e /nodename=/d /var/lib/boinc/var/slot60/slots/30/21c7bdd0d562.diag
[2026-05-27 23:58:05] ++ grep domain_name init_data.xml
[2026-05-27 23:58:05] ++ awk -F '>' '{print $2}'
[2026-05-27 23:58:05] ++ sed -e 's# #_#g'
[2026-05-27 23:58:05] ++ awk -F '<' '{print $1}'
[2026-05-27 23:58:05] + hostname=skurut29.grid.cesnet.cz
[2026-05-27 23:58:05] ++ grep user_name init_data.xml
[2026-05-27 23:58:05] ++ awk -F '>' '{print $2}'
[2026-05-27 23:58:05] ++ awk -F '<' '{print $1}'
[2026-05-27 23:58:05] ++ sed -e 's# #_#g'
[2026-05-27 23:58:05] + username=praguelcg2
[2026-05-27 23:58:05] + nodename=praguelcg2@skurut29.grid.cesnet.cz
[2026-05-27 23:58:05] + echo nodename=praguelcg2@skurut29.grid.cesnet.cz
[2026-05-27 23:58:05] + '[' -n 12 ']'
[2026-05-27 23:58:05] + sed -i -e s/Processors=1/Processors=12/ /var/lib/boinc/var/slot60/slots/30/21c7bdd0d562.diag
[2026-05-27 23:58:05] + echo exitcode=2
[2026-05-27 23:58:05] + runtimeenvironments=
[2026-05-27 23:58:05] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-05-27 23:58:05] + RTE_function_0 2
[2026-05-27 23:58:05] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-27 23:58:05] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-27 23:58:05] + export BOINC_APP=ATLAS
[2026-05-27 23:58:05] + BOINC_APP=ATLAS
[2026-05-27 23:58:05] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-27 23:58:05] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-27 23:58:05] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-27 23:58:05] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-27 23:58:05] + '[' -z 2 ']'
[2026-05-27 23:58:05] + '[' 2 == 1 ']'
[2026-05-27 23:58:05] + '[' 0 -ne 0 ']'
[2026-05-27 23:58:05] + echo 'zip all output files'
[2026-05-27 23:58:05] + flist='*.diag '
[2026-05-27 23:58:05] + for f in ./heartbeat.json ./output.list ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1 ./gmlog/
[2026-05-27 23:58:05] + '[' -e ./heartbeat.json ']'
[2026-05-27 23:58:05] + flist='*.diag  ./heartbeat.json'
[2026-05-27 23:58:05] + for f in ./heartbeat.json ./output.list ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1 ./gmlog/
[2026-05-27 23:58:05] + '[' -e ./output.list ']'
[2026-05-27 23:58:05] + for f in ./heartbeat.json ./output.list ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1 ./gmlog/
[2026-05-27 23:58:05] + '[' -e ./log.49545126._014660.job.log.1 ']'
[2026-05-27 23:58:05] + flist='*.diag  ./heartbeat.json ./log.49545126._014660.job.log.1'
[2026-05-27 23:58:05] + for f in ./heartbeat.json ./output.list ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1 ./gmlog/
[2026-05-27 23:58:05] + '[' -e ./log.49545126._014660.job.log.1 ']'
[2026-05-27 23:58:05] + flist='*.diag  ./heartbeat.json ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1'
[2026-05-27 23:58:05] + for f in ./heartbeat.json ./output.list ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1 ./gmlog/
[2026-05-27 23:58:05] + '[' -e ./gmlog/ ']'
[2026-05-27 23:58:05] + '[' -f output.list ']'
[2026-05-27 23:58:05] + tar cvf result.tar.gz 21c7bdd0d562.diag ./heartbeat.json ./log.49545126._014660.job.log.1 ./log.49545126._014660.job.log.1
[2026-05-27 23:58:05] + '[' xgnutime = xcgroup ']'
[2026-05-27 23:58:05] + '[' -n '' ']'
[2026-05-27 23:58:05] + '[' -n '' ']'
[2026-05-27 23:58:05] ++ date +%s
[2026-05-27 23:58:05] + ACCOUNTING_ENDTIME=1779919085
[2026-05-27 23:58:05] ++ date -d '1970-01-01 UTC 1779918901 seconds' +%Y%m%d%H%M%SZ
[2026-05-27 23:58:05] + echo LRMSStartTime=20260527235501Z
[2026-05-27 23:58:05] ++ date -d '1970-01-01 UTC 1779919085 seconds' +%Y%m%d%H%M%SZ
[2026-05-27 23:58:05] + echo LRMSEndTime=20260527235805Z
[2026-05-27 23:58:05] + echo walltime=184
[2026-05-27 23:58:05] + echo exitcode=2
[2026-05-27 23:58:05] + exit 2
[2026-05-27 23:58:05] ./log.49545126._014660.job.log.1
[2026-05-27 23:58:05] ./PanDA_Pilot-7154080335/prmon.log
[2026-05-27 23:58:05] ./PanDA_Pilot-7154080335/log.EVNTtoHITS
[2026-05-27 23:58:05] ./PanDA_Pilot-7154080335/PoolFileCatalog.xml
[2026-05-27 23:58:05] ./PanDA_Pilot-7154080335/pilotlog.txt
[2026-05-27 23:58:05] ./runtime_log
[2026-05-27 23:58:05] ./pilot3/pilot/util/loggingsupport.py
[2026-05-27 23:58:05] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-05-27 23:58:05] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-05-27 23:58:05] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-05-27 23:58:05] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-05-27 23:58:05] ./pilot3/pilot/util/realtimelogger.py
[2026-05-27 23:58:05] ./pilotlog.txt
[2026-05-27 23:58:05] ./runtime_log.err
00:25:02 (2334357): wrapper (7.7.26015): starting
00:25:02 (2334357): wrapper: running run_atlas (--nthreads 12)
[2026-05-28 00:25:02] Arguments: --nthreads 12
[2026-05-28 00:25:02] Threads: 12
[2026-05-28 00:25:02] This job has been restarted, cleaning up previous attempt
[2026-05-28 00:25:02] Checking for CVMFS
[2026-05-28 00:25:02] No cvmfs_config command found, will try listing directly
[2026-05-28 00:25:02] CVMFS is ok
[2026-05-28 00:25:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 00:25:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 00:25:02] Further information can be found at the LHC@home message board.
[2026-05-28 00:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 00:25:02] Checking for apptainer binary...
[2026-05-28 00:25:02] which: no apptainer in ((null))
[2026-05-28 00:25:02] apptainer is not installed, using version from CVMFS
[2026-05-28 00:25:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 00:25:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/30/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-28 00:25:02] apptainer works
[2026-05-28 00:25:02] Set ATHENA_PROC_NUMBER=12
[2026-05-28 00:25:02] Set ATHENA_CORE_NUMBER=12
[2026-05-28 00:25:02] Starting ATLAS job with PandaID=7154080335
[2026-05-28 00:25:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 00:45:16]  *** The last 200 lines of the pilot log: ***
[2026-05-28 00:45:16]  guid=e1b6002d-84a1-4dfa-a015-0e6dca0507c6
[2026-05-28 00:45:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-28 00:45:16]  is_altstaged=None
[2026-05-28 00:45:16]  is_tar=False
[2026-05-28 00:45:16]  lfn=log.49545126._014660.job.log.tgz.1
[2026-05-28 00:45:16]  mtime=0
[2026-05-28 00:45:16]  protocol_id=None
[2026-05-28 00:45:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-28 00:45:16]  replicas=None
[2026-05-28 00:45:16]  scope=mc23_13p6TeV
[2026-05-28 00:45:16]  status=None
[2026-05-28 00:45:16]  status_code=0
[2026-05-28 00:45:16]  storage_token=
[2026-05-28 00:45:16]  surl=/var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7154080335/log.49545126._014660.job.log.tgz.1
[2026-05-28 00:45:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/67/log.49545126._014660.job.log.tgz.1
[2026-05-28 00:45:16]  workdir=None
[2026-05-28 00:45:16] ]
[2026-05-28 00:45:16] 2026-05-27 22:44:21,429 | INFO     | transferring file log.49545126._014660.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7154080335/log.49545126._014660.job.log.tgz.1 to /var/lib/
[2026-05-28 00:45:16] 2026-05-27 22:44:21,429 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7154080335/log.49545126._014660.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/30/
[2026-05-28 00:45:16] 2026-05-27 22:44:21,442 | INFO     | adding to output.list: log.49545126._014660.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/67/log.49545126._014660.job.log.tg
[2026-05-28 00:45:16] 2026-05-27 22:44:21,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-28 00:45:16] 2026-05-27 22:44:21,442 | INFO     | summary of transferred files:
[2026-05-28 00:45:16] 2026-05-27 22:44:21,442 | INFO     |  -- lfn=log.49545126._014660.job.log.tgz.1, status_code=0, status=transferred
[2026-05-28 00:45:16] 2026-05-27 22:44:21,442 | INFO     | stage-out finished correctly
[2026-05-28 00:45:16] 2026-05-27 22:44:21,928 | INFO     | monitor loop #91: job 0:7154080335 is in state 'finished'
[2026-05-28 00:45:16] 2026-05-27 22:44:21,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 00:45:16] 2026-05-27 22:44:23,197 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 00:45:16] 2026-05-27 22:44:24,266 | INFO     | job 7154080335 has state=finished
[2026-05-28 00:45:16] 2026-05-27 22:44:24,266 | INFO     | preparing for final server update for job 7154080335 in state='finished'
[2026-05-28 00:45:16] 2026-05-27 22:44:24,431 | INFO     | monitor loop #92: job 0:7154080335 is in state 'finished'
[2026-05-28 00:45:16] 2026-05-27 22:44:24,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,799 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,799 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7154080335/jobReport.json
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/30/workernode_map.json
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | this job has now completed (state=finished)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | log transfer has been attempted: DONE
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | job 7154080335 has finished - writing final server update
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2313578/.job.ad'
[2026-05-28 00:45:16] 2026-05-27 22:44:24,800 | INFO     | total number of processed events: 400 (read)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | INFO     | using path: /var/lib/boinc/var/slot60/slots/30/PanDA_Pilot-7154080335/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | INFO     | extracted standard info from prmon json
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 00:45:16] 2026-05-27 22:44:24,810 | INFO     | fitting pss+swap vs Time
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | sum of square deviations: 532103.0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | sum of deviations: -13554261.0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | mean x (centered): 0.0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | mean y: 2802876.0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | intersect: 2802876.0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | chi2: 0.00018022026552576824
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | current memory leak: -25.47 B/s (using 12 data points, chi2=0.00)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | could have reported an average CPU frequency of 3609 MHz (4 samples)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | ..............................
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | . Timing measurements:
[2026-05-28 00:45:16] 2026-05-27 22:44:24,811 | INFO     | . get job = 0 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . initial setup = 0 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . payload setup = 4 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . stage-in = 0 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . payload execution = 1134 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . stage-out = 0 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | . log creation = 0 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,812 | INFO     | ..............................
[2026-05-28 00:45:16] 2026-05-27 22:44:24,838 | INFO     | 
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | job summary report
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | --------------------------------------------------
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | PanDA job id: 7154080335
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | task id: 49545126
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | errors: (none)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | pilot state: finished 
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | transexitcode: 0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | exeerrorcode: 0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | exeerrordiag: 
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | exitcode: 0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | exitmsg: OK
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | cpuconsumptiontime: 11878 s
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | nevents: 400
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | neventsw: 0
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | pid: 2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | pgrp: 2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | corecount: 12
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | event service: False
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | sizes: {0: 2266032, 1: 2267662, 11: 2267690, 1142: 2301319, 1144: 2301319, 1146: 2301513}
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | --------------------------------------------------
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | 
[2026-05-28 00:45:16] 2026-05-27 22:44:24,839 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/30
[2026-05-28 00:45:16] 2026-05-27 22:44:24,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,853 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | job 7154080335 has completed (purged errors)
[2026-05-28 00:45:16] 2026-05-27 22:44:24,854 | INFO     | overall cleanup function is called
[2026-05-28 00:45:16] 2026-05-27 22:44:25,860 | INFO     | --- collectZombieJob: --- 10, [2342220]
[2026-05-28 00:45:16] 2026-05-27 22:44:25,860 | INFO     | zombie collector waiting for pid 2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:25,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 00:45:16] 2026-05-27 22:44:25,860 | INFO     | collected zombie processes
[2026-05-28 00:45:16] 2026-05-27 22:44:25,860 | INFO     | will attempt to kill all subprocesses of pid=2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:26,027 | INFO     | process IDs to be killed: [2342220] (in reverse order)
[2026-05-28 00:45:16] 2026-05-27 22:44:26,121 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 00:45:16] 2026-05-27 22:44:26,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 00:45:16] 2026-05-27 22:44:26,139 | INFO     | did not find any defunct processes belonging to 2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:26,154 | INFO     | did not find any defunct processes belonging to 2342220
[2026-05-28 00:45:16] 2026-05-27 22:44:26,155 | INFO     | Ready for new job
[2026-05-28 00:45:16] 2026-05-27 22:44:26,156 | INFO     | ***************************************
[2026-05-28 00:45:16] 2026-05-27 22:44:26,156 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 00:45:16] 2026-05-27 22:44:26,156 | INFO     | ***************************************
[2026-05-28 00:45:16] 2026-05-27 22:44:26,156 | INFO     | 
[2026-05-28 00:45:16] 2026-05-27 22:44:26,159 | INFO     | architecture information:
[2026-05-28 00:45:16] 2026-05-27 22:44:26,160 | INFO     | executing command: cat /etc/os-release
[2026-05-28 00:45:16] 2026-05-27 22:44:26,169 | INFO     | cat /etc/os-release:
[2026-05-28 00:45:16] NAME="CentOS Linux"
[2026-05-28 00:45:16] VERSION="7 (Core)"
[2026-05-28 00:45:16] ID="centos"
[2026-05-28 00:45:16] ID_LIKE="rhel fedora"
[2026-05-28 00:45:16] VERSION_ID="7"
[2026-05-28 00:45:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 00:45:16] ANSI_COLOR="0;31"
[2026-05-28 00:45:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 00:45:16] HOME_URL="https://www.centos.org/"
[2026-05-28 00:45:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 00:45:16] 
[2026-05-28 00:45:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 00:45:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 00:45:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 00:45:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 00:45:16] 
[2026-05-28 00:45:16] 2026-05-27 22:44:26,169 | INFO     | ***************************************
[2026-05-28 00:45:16] 2026-05-27 22:44:26,672 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/30
[2026-05-28 00:45:16] 2026-05-27 22:44:26,686 | INFO     | sufficient remaining disk space (328773664768 B)
[2026-05-28 00:45:16] 2026-05-27 22:44:26,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 00:45:16] 2026-05-27 22:44:26,686 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 00:45:16] 2026-05-27 22:44:26,686 | INFO     | update_server=False
[2026-05-28 00:45:16] 2026-05-27 22:44:26,686 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 00:45:16] 2026-05-27 22:44:26,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 00:45:16] 2026-05-27 22:44:26,934 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-28 00:45:16] 2026-05-27 22:44:26,934 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-28 00:45:16] 2026-05-27 22:44:26,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 00:45:16] 2026-05-27 22:44:26,934 | INFO     | will abort loop
[2026-05-28 00:45:16] 2026-05-27 22:44:26,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 00:45:16] 2026-05-27 22:44:27,039 | INFO     | all job control threads have been joined
[2026-05-28 00:45:16] 2026-05-27 22:44:27,556 | INFO     | all payload control threads have been joined
[2026-05-28 00:45:16] 2026-05-27 22:44:27,656 | INFO     | all data control threads have been joined
[2026-05-28 00:45:16] 2026-05-27 22:44:27,689 | INFO     | [job] queue monitor thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:27,692 | INFO     | [job] retrieve thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:27,940 | INFO     | [job] job monitor thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,043 | INFO     | [job] control thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,049 | INFO     | [payload] failed_post thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,079 | INFO     | [job] validate thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,122 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,159 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,277 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,346 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,367 | INFO     | [data] copytool_in thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,552 | INFO     | [payload] validate_post thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,562 | INFO     | [payload] control thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,661 | INFO     | [data] control thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:28,976 | INFO     | [data] copytool_out thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:29,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 00:45:16] 2026-05-27 22:44:33,253 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 00:45:16] 2026-05-27 22:44:57,349 | INFO     | PID=2338985 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 00:45:16] 2026-05-27 22:44:57,352 | INFO     | .. there are 6 such processes running
[2026-05-28 00:45:16] 2026-05-27 22:44:57,354 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 00:45:16] 2026-05-27 22:44:57,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 00:45:16] 2026-05-27 22:44:57,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 00:45:16] 2026-05-27 22:45:09,619 | INFO     | [monitor] cgroup control has ended
[2026-05-28 00:45:16] 2026-05-27 22:45:11,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23225182099264)>', '<ExcThread(monitor, started 23224884631296)>']
[2026-05-28 00:45:16] 2026-05-27 22:45:11,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 00:45:16] 2026-05-27 22:45:11,425 | INFO     | [monitor] control thread has ended
[2026-05-28 00:45:16] 2026-05-27 22:45:16,204 | INFO     | all workflow threads have been joined
[2026-05-28 00:45:16] 2026-05-27 22:45:16,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 00:45:16] 2026-05-27 22:45:16,204 | INFO     | traces error code: 0
[2026-05-28 00:45:16] 2026-05-27 22:45:16,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 00:45:16] 2026-05-27 22:45:16,279 [wrapper] ==== pilot stdout END ====
[2026-05-28 00:45:16] 2026-05-27 22:45:16,281 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 00:45:16] 2026-05-27 22:45:16,282 [wrapper] pilotpid: 2338985
[2026-05-28 00:45:16] 2026-05-27 22:45:16,284 [wrapper] Pilot exit status: 0
[2026-05-28 00:45:16] 2026-05-27 22:45:16,288 [wrapper] pandaids: 7154080335 7154080335 7154080335
[2026-05-28 00:45:16] 2026-05-27 22:45:16,357 [wrapper] cleanup supervisor_pilot 2424515 2338986
[2026-05-28 00:45:16] 2026-05-27 22:45:16,358 [wrapper] Test setup, not cleaning
[2026-05-28 00:45:16] 2026-05-27 22:45:16,360 [wrapper] apfmon messages muted
[2026-05-28 00:45:16] 2026-05-27 22:45:16,361 [wrapper] ==== wrapper stdout END ====
[2026-05-28 00:45:16] 2026-05-27 22:45:16,362 [wrapper] ==== wrapper stderr END ====
[2026-05-28 00:45:16]  *** Error codes and diagnostics ***
[2026-05-28 00:45:16]     "exeErrorCode": 0,
[2026-05-28 00:45:16]     "pilotErrorCode": 0,
[2026-05-28 00:45:16]  *** Listing of results directory ***
[2026-05-28 00:45:16] total 704676
[2026-05-28 00:45:16] drwx------. 5 boinc boinc      4096 May 21 18:07 pilot3
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc      5631 May 27 00:42 queuedata.json
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc    709501 May 27 00:42 pilot3.tar.gz
[2026-05-28 00:45:16] -rwx------. 1 boinc boinc     36281 May 27 00:42 runpilot2-wrapper.sh
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc       100 May 27 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 00:45:16] -rwxr-xr-x. 1 boinc boinc      7986 May 27 03:40 run_atlas
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc       105 May 27 03:40 job.xml
[2026-05-28 00:45:16] -rw-r--r--. 3 boinc boinc 269306702 May 27 03:40 EVNT.49539704._000579.pool.root.1
[2026-05-28 00:45:16] -rw-r--r--. 3 boinc boinc 269306702 May 27 03:40 ATLAS.root_0
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc     15667 May 27 03:40 start_atlas.sh
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc    722750 May 27 03:40 input.tar.gz
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc         0 May 27 03:40 boinc_lockfile
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc   1251485 May 27 03:40 cric_ddmendpoints.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc         0 May 27 23:55 wrapper_sigint_2155235
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc         0 May 27 23:55 agis_ddmendpoints.agis.ALL.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc         0 May 27 23:58 wrapper_sigkill_2155235
[2026-05-28 00:45:16] drwxrwx--x. 2 boinc boinc      4096 May 27 23:58 shared
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc      6634 May 28 00:25 init_data.xml
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc      2579 May 28 00:25 pandaJob.out
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc    996423 May 28 00:25 agis_schedconf.cvmfs.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc       444 May 28 00:25 workernode_map.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc 178019852 May 28 00:44 HITS.49545126._014660.pool.root.1
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc       487 May 28 00:44 boinc_task_state.xml
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc      1029 May 28 00:44 memory_monitor_summary.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc    341307 May 28 00:44 log.49545126._014660.job.log.tgz.1
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc      6424 May 28 00:44 heartbeat_new.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc      6315 May 28 00:44 heartbeat.json
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc        98 May 28 00:44 pilot_heartbeat.json
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc        27 May 28 00:45 wrapper_checkpoint.txt
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc      8192 May 28 00:45 boinc_mmap_file
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc      5019 May 28 00:45 pilotlog.txt
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc    159214 May 28 00:45 log.49545126._014660.job.log.1
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc       357 May 28 00:45 output.list
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc       410 May 28 00:45 runtime_log
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc    522240 May 28 00:45 result.tar.gz
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc      8923 May 28 00:45 runtime_log.err
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc      1378 May 28 00:45 21c7bdd0d562.diag
[2026-05-28 00:45:16] -rw-r--r--. 1 boinc boinc     38276 May 28 00:45 stderr.txt
[2026-05-28 00:45:16] HITS file was successfully produced:
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc 178019852 May 28 00:44 shared/HITS.pool.root.1
[2026-05-28 00:45:16]  *** Contents of shared directory: ***
[2026-05-28 00:45:16] total 438088
[2026-05-28 00:45:16] -rw-r--r--. 3 boinc boinc 269306702 May 27 03:40 ATLAS.root_0
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc     15667 May 27 03:40 start_atlas.sh
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc    722750 May 27 03:40 input.tar.gz
[2026-05-28 00:45:16] -rw-------. 1 boinc boinc 178019852 May 28 00:44 HITS.pool.root.1
[2026-05-28 00:45:16] -rw-r--r--. 2 boinc boinc    522240 May 28 00:45 result.tar.gz
00:45:18 (2334357): run_atlas exited; CPU time 11891.899161
00:45:18 (2334357): called boinc_finish(0)

</stderr_txt>
]]>


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