Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-30 18:26:23 (8644): vboxwrapper version 26210
2026-05-30 18:26:23 (8644): BOINC client version: 8.2.9
2026-05-30 18:26:25 (8644): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-05-30 18:26:25 (8644): Successfully copied 'init_data.xml' to the shared directory.
2026-05-30 18:26:25 (8644): Create VM. (boinc_5879603cb9199df7, slot#0)
2026-05-30 18:26:26 (8644): Setting Memory Size for VM. (4600MB)
2026-05-30 18:26:26 (8644): Setting CPU Count for VM. (6)
2026-05-30 18:26:27 (8644): Setting Chipset Options for VM.
2026-05-30 18:26:27 (8644): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-30 18:26:27 (8644): Setting Boot Options for VM.
2026-05-30 18:26:28 (8644): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-30 18:26:28 (8644): Enabling VM Network Access.
2026-05-30 18:26:29 (8644): Disabling USB Support for VM.
2026-05-30 18:26:29 (8644): Disabling COM Port Support for VM.
2026-05-30 18:26:29 (8644): Disabling LPT Port Support for VM.
2026-05-30 18:26:30 (8644): Disabling Audio Support for VM.
2026-05-30 18:26:30 (8644): Disabling Clipboard Support for VM.
2026-05-30 18:26:30 (8644): Disabling Drag and Drop Support for VM.
2026-05-30 18:26:31 (8644): Adding storage controller(s) to VM.
2026-05-30 18:26:31 (8644): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-30 18:26:32 (8644): Adding VirtualBox Guest Additions to VM.
2026-05-30 18:26:33 (8644): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-30 18:26:33 (8644): forwarding host port 55339 to guest port 80
2026-05-30 18:26:33 (8644): Enabling remote desktop for VM.
2026-05-30 18:26:34 (8644): Required extension pack not installed, remote desktop not enabled.
2026-05-30 18:26:34 (8644): Enabling shared directory for VM.
2026-05-30 18:26:34 (8644): Starting VM using VBoxManage interface. (boinc_5879603cb9199df7, slot#0)
2026-05-30 18:26:39 (8644): Successfully started VM. (PID = '20792')
2026-05-30 18:26:39 (8644): Reporting VM Process ID to BOINC.
2026-05-30 18:26:39 (8644): Guest Log: BIOS: VirtualBox 6.1.34
2026-05-30 18:26:39 (8644): Guest Log: CPUID EDX: 0x178bfbff
2026-05-30 18:26:39 (8644): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-30 18:26:39 (8644): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-30 18:26:39 (8644): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-30 18:26:39 (8644): Detected: Web Application Enabled (http://localhost:55339)
2026-05-30 18:26:39 (8644): Preference change detected
2026-05-30 18:26:39 (8644): Setting CPU throttle for VM. (100%)
2026-05-30 18:26:39 (8644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-30 18:26:41 (8644): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-30 18:26:41 (8644): Guest Log: BIOS: Booting from Hard Disk...
2026-05-30 18:26:44 (8644): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-30 18:26:44 (8644): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-30 18:26:44 (8644): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-30 18:26:50 (8644): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-30 18:26:50 (8644): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-05-30 18:26:54 (8644): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000094 main     Log opened 2026-05-30T18:26:52.766947000Z
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000159 main     OS Product: Linux
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000185 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000205 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000225 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000226 main     Process ID: 1337
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.000226 main     Package type: LINUX_64BITS_GENERIC
2026-05-30 18:26:54 (8644): Guest Log: 00:00:00.001700 main     5.2.32 r132073 started. Verbose level = 0
2026-05-30 18:26:54 (8644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-30 18:26:54 (8644): Guest Log: [INFO] Mounting shared directory
2026-05-30 18:26:54 (8644): Guest Log: [INFO] Checking for init_data.xml
2026-05-30 18:26:57 (8644): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-30 18:26:57 (8644): Guest Log: [INFO] Detected branch: prod
2026-05-30 18:26:58 (8644): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-30 18:26:58 (8644): Guest Log: Copying input files
2026-05-30 18:26:59 (8644): Guest Log: Copied input files into RunAtlas.
2026-05-30 18:26:59 (8644): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-30 18:26:59 (8644): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-30 18:26:59 (8644): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-30 18:26:59 (8644): Guest Log: Further information can be found at the LHC@home message board.
2026-05-30 18:27:04 (8644): Guest Log: 00:00:10.003497 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 938 328 000ns (GuestNow=1 780 158 423 831 466 000 ns GuestLast=1 780 165 612 769 794 000 ns fSetTimeLastLoop=true )
2026-05-30 18:27:08 (8644): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-30 18:27:09 (8644): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-30 18:27:09 (8644): Guest Log: 2.6.3.0 1613 0 30196 159971 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-30 18:27:09 (8644): Guest Log: copied the webapp to /var/www
2026-05-30 18:27:09 (8644): Guest Log: ATHENA_PROC_NUMBER=6
2026-05-30 18:27:09 (8644): Guest Log: ATHENA_CORE_NUMBER=6
2026-05-30 18:27:09 (8644): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-30 18:27:09 (8644): Guest Log:  *** Starting ATLAS job. (PandaID=7153919114 taskID=49545130) ***
2026-05-30 19:09:21 (8644): Preference change detected
2026-05-30 19:09:21 (8644): Setting CPU throttle for VM. (100%)
2026-05-30 19:09:22 (8644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-30 19:09:25 (8644): Preference change detected
2026-05-30 19:09:25 (8644): Setting CPU throttle for VM. (100%)
2026-05-30 19:09:26 (8644): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-30 19:28:06 (8644): Guest Log:  *** Job finished ***
2026-05-30 19:28:06 (8644): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:27:56,643 | INFO     | end of generic workflow (traces error code: 0)
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:27:56,643 | INFO     | traces error code: 0
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:27:56,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:27:57,387 [wrapper] supervise_pilot (15 min periods counter: 5)
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,505 | INFO     | PID=6036 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,506 | INFO     | found 0 job(s) in 20 queues
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,506 | INFO     | [monitor] control thread has ended
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,573 [wrapper] ==== pilot stdout END ====
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,577 [wrapper] ==== wrapper stdout RESUME ====
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,581 [wrapper] pilotpid: 6036
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,584 [wrapper] Pilot exit status: 0
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,645 [wrapper] pandaids: 7153919114
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,668 [wrapper] cleanup supervisor_pilot 15877 6037
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,674 [wrapper] Test setup, not cleaning
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,678 [wrapper] apfmon messages muted
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,681 [wrapper] ==== wrapper stdout END ====
2026-05-30 19:28:06 (8644): Guest Log: 2026-05-30 17:28:02,685 [wrapper] ==== wrapper stderr END ====
2026-05-30 19:28:06 (8644): Guest Log:  *** Error codes and diagnostics ***
2026-05-30 19:28:06 (8644): Guest Log:     "exeErrorCode": 0,
2026-05-30 19:28:06 (8644): Guest Log:     "pilotErrorCode": 0,
2026-05-30 19:28:06 (8644): Guest Log:  *** Listing of results directory ***
2026-05-30 19:28:06 (8644): Guest Log: total 190288
2026-05-30 19:28:06 (8644): Guest Log: -rwx------. 1 atlas atlas     36281 May 26 20:06 runpilot2-wrapper.sh
2026-05-30 19:28:06 (8644): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 26 20:07 queuedata.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 26 20:07 pilot3.tar.gz
2026-05-30 19:28:06 (8644): Guest Log: -rwxr-xr-x. 1 atlas atlas      8736 May 30 16:26 init_data.xml
2026-05-30 19:28:06 (8644): Guest Log: -rwxr-xr-x. 1 atlas atlas    722755 May 30 16:26 input.tar.gz
2026-05-30 19:28:06 (8644): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 30 16:26 start_atlas.sh
2026-05-30 19:28:06 (8644): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 16:26 EVNT.49539717._000022.pool.root.1 -> /data/./ATLAS.root_0
2026-05-30 19:28:06 (8644): Guest Log: -rw-r--r--. 1 atlas atlas      2608 May 30 16:27 pandaJob.out
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas    995585 May 30 16:28 agis_schedconf.cvmfs.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas         0 May 30 16:28 agis_ddmendpoints.agis.ALL.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas   1251485 May 30 16:28 cric_ddmendpoints.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas       428 May 30 16:28 workernode_map.json
2026-05-30 19:28:06 (8644): Guest Log: drwx------. 5 atlas atlas      4096 May 30 16:28 pilot3
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas 189740846 May 30 17:27 HITS.49545130._000548.pool.root.1
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas      1032 May 30 17:27 memory_monitor_summary.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas    270480 May 30 17:27 log.49545130._000548.job.log.tgz.1
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas      6435 May 30 17:27 heartbeat_new.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas      6326 May 30 17:27 heartbeat.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas        95 May 30 17:28 pilot_heartbeat.json
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas       744 May 30 17:28 pilotlog.txt
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas    356708 May 30 17:28 log.49545130._000548.job.log.1
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas       357 May 30 17:28 output.list
2026-05-30 19:28:06 (8644): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 30 17:28 runtime_log
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas    645120 May 30 17:28 result.tar.gz
2026-05-30 19:28:06 (8644): Guest Log: -rw-r--r--. 1 atlas atlas      8407 May 30 17:28 runtime_log.err
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas       664 May 30 17:28 fd3a46124206.diag
2026-05-30 19:28:06 (8644): Guest Log: Looking for outputfile HITS.49545130._000548.pool.root.1
2026-05-30 19:28:06 (8644): Guest Log: HITS file was successfully produced
2026-05-30 19:28:06 (8644): Guest Log: -rw-------. 1 atlas atlas 189740846 May 30 17:27 /home/atlas/RunAtlas/HITS.49545130._000548.pool.root.1
2026-05-30 19:28:08 (8644): Guest Log: Successfully finished the ATLAS job!
2026-05-30 19:28:08 (8644): Guest Log: Copying the results back to the shared directory!
2026-05-30 19:28:08 (8644): Guest Log:  *** Contents of shared directory: ***
2026-05-30 19:28:08 (8644): Guest Log: total 461276
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root 281200522 May 30 16:26 ATLAS.root_0
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root 189740846 May 30 17:28 HITS.pool.root.1
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root      8736 May 30 16:26 init_data.xml
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root    722755 May 27 00:53 input.tar.gz
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root    645120 May 30 17:28 result.tar.gz
2026-05-30 19:28:08 (8644): Guest Log: -rwxrwxrwx. 1 root root     15667 May 27 00:53 start_atlas.sh
2026-05-30 19:28:08 (8644): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-30 19:28:08 (8644): VM Completion File Detected.
2026-05-30 19:28:08 (8644): Powering off VM.
2026-05-30 19:28:09 (8644): Successfully stopped VM.
2026-05-30 19:28:09 (8644): Deregistering VM. (boinc_5879603cb9199df7, slot#0)
2026-05-30 19:28:09 (8644): Removing network bandwidth throttle group from VM.
2026-05-30 19:28:10 (8644): Removing VM from VirtualBox.
2026-05-30 19:28:15 (8644): called boinc_finish(0)

</stderr_txt>
]]>

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