Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
12:05:34 (1621154): wrapper (7.7.26015): starting
12:05:34 (1621154): wrapper: running run_atlas (--nthreads 4)
[2026-05-26 12:05:34] Arguments: --nthreads 4
[2026-05-26 12:05:34] Threads: 4
[2026-05-26 12:05:34] Checking for CVMFS
[2026-05-26 12:05:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-26 12:05:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-26 12:05:34] Running cvmfs_config stat atlas.cern.ch
[2026-05-26 12:05:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-26 12:05:34] 2.13.3.0 1197502 295 52432 159815 1 188 3696773 6144001 4610 130560 0 1498440 99.997 20154 743 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-26 12:05:34] CVMFS is ok
[2026-05-26 12:05:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-26 12:05:34] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-26 12:05:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-26 12:05:34] Further information can be found at the LHC@home message board.
[2026-05-26 12:05:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-26 12:05:34] Checking for apptainer binary...
[2026-05-26 12:05:34] apptainer is not installed, using version from CVMFS
[2026-05-26 12:05:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-26 12:05:34] desktop-b650ef
[2026-05-26 12:05:34] apptainer works
[2026-05-26 12:05:34] Set ATHENA_PROC_NUMBER=4
[2026-05-26 12:05:34] Set ATHENA_CORE_NUMBER=4
[2026-05-26 12:05:34] Starting ATLAS job with PandaID=7153643235
[2026-05-26 12:05:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-26 13:17:03]  *** The last 200 lines of the pilot log: ***
[2026-05-26 13:17:03]  status_code=0
[2026-05-26 13:17:03]  storage_token=
[2026-05-26 13:17:03]  surl=/var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/log.49545126._001314.job.log.tgz.1
[2026-05-26 13:17:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/8f/log.49545126._001314.job.log.tgz.1
[2026-05-26 13:17:03]  workdir=None
[2026-05-26 13:17:03] ]
[2026-05-26 13:17:03] 2026-05-26 20:16:19,914 | INFO     | transferring file log.49545126._001314.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/log.49545126._001314.job.log.tgz.1 to /var/lib/boin
[2026-05-26 13:17:03] 2026-05-26 20:16:19,914 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/log.49545126._001314.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4954
[2026-05-26 13:17:03] 2026-05-26 20:16:19,925 | INFO     | adding to output.list: log.49545126._001314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/8f/log.49545126._001314.job.log.tg
[2026-05-26 13:17:03] 2026-05-26 20:16:19,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-26 13:17:03] 2026-05-26 20:16:19,926 | INFO     | summary of transferred files:
[2026-05-26 13:17:03] 2026-05-26 20:16:19,926 | INFO     |  -- lfn=log.49545126._001314.job.log.tgz.1, status_code=0, status=transferred
[2026-05-26 13:17:03] 2026-05-26 20:16:19,926 | INFO     | stage-out finished correctly
[2026-05-26 13:17:03] 2026-05-26 20:16:21,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-26 13:17:03] 2026-05-26 20:16:23,019 | WARNING  | process 1642578 can no longer be monitored (due to stat problems) - aborting
[2026-05-26 13:17:03] 2026-05-26 20:16:23,019 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/memory_monitor_summary.json (trf name=prmon)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,019 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/memory_monitor_summary.json (trf name=prmon)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,020 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-26 13:17:03] 2026-05-26 20:16:23,020 | WARNING  | maxPSS not found in memory monitor output
[2026-05-26 13:17:03] 2026-05-26 20:16:23,020 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2278721 B
[2026-05-26 13:17:03] 2026-05-26 20:16:23,020 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15841 B
[2026-05-26 13:17:03] 2026-05-26 20:16:23,020 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2026-05-26 13:17:03] 2026-05-26 20:16:23,033 | INFO     | sufficient remaining disk space (389000724480 B)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,034 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,034 | INFO     | size of work directory /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235: 2573401 B (within 5033164800 B limit)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,034 | INFO     | pfn file=/var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/HITS.49545126._001314.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,034 | INFO     | total size of present files: 0 B (workdir size: 2573401 B)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,034 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/HITS.49545126._001314.pool.root.1 since it does not exist
[2026-05-26 13:17:03] 2026-05-26 20:16:23,112 | INFO     | number of running child processes to parent process 1642578: 1
[2026-05-26 13:17:03] 2026-05-26 20:16:23,112 | INFO     | maximum number of monitored processes: 6
[2026-05-26 13:17:03] 2026-05-26 20:16:23,286 | INFO     | job 7153643235 has state=finished
[2026-05-26 13:17:03] 2026-05-26 20:16:23,286 | INFO     | preparing for final server update for job 7153643235 in state='finished'
[2026-05-26 13:17:03] 2026-05-26 20:16:23,659 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,659 | INFO     | reading metadata from: /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/jobReport.json
[2026-05-26 13:17:03] 2026-05-26 20:16:23,660 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/18/workernode_map.json
[2026-05-26 13:17:03] 2026-05-26 20:16:23,660 | INFO     | this job has now completed (state=finished)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,660 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,660 | INFO     | log transfer has been attempted: DONE
[2026-05-26 13:17:03] 2026-05-26 20:16:23,660 | INFO     | job 7153643235 has finished - writing final server update
[2026-05-26 13:17:03] 2026-05-26 20:16:23,661 | INFO     | total number of processed events: 400 (read)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,663 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-7153643235/memory_monitor_summary.json (trf name=prmon)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,663 | INFO     | extracted standard info from prmon json
[2026-05-26 13:17:03] 2026-05-26 20:16:23,663 | INFO     | extracted standard memory fields from prmon json
[2026-05-26 13:17:03] 2026-05-26 20:16:23,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-26 13:17:03] 2026-05-26 20:16:23,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | fitting pss+swap vs Time
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | sum of square deviations: 73882315.5
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | sum of deviations: -203482763.0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | mean x (centered): 0.0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | mean y: 2351129.3870967743
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | intersect: 2351129.3870967743
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | chi2: 0.004333624691262307
[2026-05-26 13:17:03] 2026-05-26 20:16:23,664 | INFO     | current memory leak: -2.75 B/s (using 62 data points, chi2=0.00)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | could have reported an average CPU frequency of 4665 MHz (6 samples)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | ..............................
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . Timing measurements:
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . get job = 0 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . initial setup = 11 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . payload setup = 5 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . stage-in = 0 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . payload execution = 4208 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . stage-out = 0 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | . log creation = 0 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,665 | INFO     | ..............................
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | 
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | job summary report
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | --------------------------------------------------
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | PanDA job id: 7153643235
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | task id: 49545126
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | errors: (none)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | pilot state: finished 
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | transexitcode: 0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | exeerrorcode: 0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | exeerrordiag: 
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | exitcode: 0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | exitmsg: OK
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | cpuconsumptiontime: 16034 s
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | nevents: 400
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | neventsw: 0
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | pid: 1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | pgrp: 1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | corecount: 4
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | event service: False
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | sizes: {0: 2267648, 10: 2267648, 4217: 2293711, 4218: 2302725, 4219: 2302781, 4222: 2303099}
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | --------------------------------------------------
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | 
[2026-05-26 13:17:03] 2026-05-26 20:16:23,700 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2026-05-26 13:17:03] 2026-05-26 20:16:23,714 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | job 7153643235 has completed (purged errors)
[2026-05-26 13:17:03] 2026-05-26 20:16:23,715 | INFO     | overall cleanup function is called
[2026-05-26 13:17:03] 2026-05-26 20:16:24,722 | INFO     | --- collectZombieJob: --- 10, [1642578]
[2026-05-26 13:17:03] 2026-05-26 20:16:24,722 | INFO     | zombie collector waiting for pid 1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:24,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-26 13:17:03] 2026-05-26 20:16:24,722 | INFO     | collected zombie processes
[2026-05-26 13:17:03] 2026-05-26 20:16:24,722 | INFO     | will attempt to kill all subprocesses of pid=1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:24,797 | INFO     | process IDs to be killed: [1642578] (in reverse order)
[2026-05-26 13:17:03] 2026-05-26 20:16:24,841 | WARNING  | found no corresponding commands to process id(s)
[2026-05-26 13:17:03] 2026-05-26 20:16:24,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-26 13:17:03] 2026-05-26 20:16:24,844 | INFO     | did not find any defunct processes belonging to 1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:24,846 | INFO     | did not find any defunct processes belonging to 1642578
[2026-05-26 13:17:03] 2026-05-26 20:16:24,846 | INFO     | Ready for new job
[2026-05-26 13:17:03] 2026-05-26 20:16:24,847 | INFO     | ***************************************
[2026-05-26 13:17:03] 2026-05-26 20:16:24,847 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-26 13:17:03] 2026-05-26 20:16:24,847 | INFO     | ***************************************
[2026-05-26 13:17:03] 2026-05-26 20:16:24,847 | INFO     | 
[2026-05-26 13:17:03] 2026-05-26 20:16:24,848 | INFO     | architecture information:
[2026-05-26 13:17:03] 2026-05-26 20:16:24,848 | INFO     | executing command: cat /etc/os-release
[2026-05-26 13:17:03] 2026-05-26 20:16:24,859 | INFO     | cat /etc/os-release:
[2026-05-26 13:17:03] NAME="CentOS Linux"
[2026-05-26 13:17:03] VERSION="7 (Core)"
[2026-05-26 13:17:03] ID="centos"
[2026-05-26 13:17:03] ID_LIKE="rhel fedora"
[2026-05-26 13:17:03] VERSION_ID="7"
[2026-05-26 13:17:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-26 13:17:03] ANSI_COLOR="0;31"
[2026-05-26 13:17:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-26 13:17:03] HOME_URL="https://www.centos.org/"
[2026-05-26 13:17:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-26 13:17:03] 
[2026-05-26 13:17:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-26 13:17:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-26 13:17:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-26 13:17:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-26 13:17:03] 
[2026-05-26 13:17:03] 2026-05-26 20:16:24,859 | INFO     | ***************************************
[2026-05-26 13:17:03] 2026-05-26 20:16:25,362 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | INFO     | sufficient remaining disk space (389003870208 B)
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | INFO     | current server update state: UPDATING_FINAL
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | INFO     | update_server=False
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-26 13:17:03] 2026-05-26 20:16:25,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-26 13:17:03] 2026-05-26 20:16:25,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-26 13:17:03] 2026-05-26 20:16:25,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-26 13:17:03] 2026-05-26 20:16:25,617 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-26 13:17:03] 2026-05-26 20:16:25,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-26 13:17:03] 2026-05-26 20:16:25,617 | INFO     | will abort loop
[2026-05-26 13:17:03] 2026-05-26 20:16:25,707 | INFO     | all data control threads have been joined
[2026-05-26 13:17:03] 2026-05-26 20:16:25,852 | INFO     | all payload control threads have been joined
[2026-05-26 13:17:03] 2026-05-26 20:16:26,218 | INFO     | all job control threads have been joined
[2026-05-26 13:17:03] 2026-05-26 20:16:26,376 | INFO     | [job] retrieve thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,376 | INFO     | [job] queue monitor thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,568 | INFO     | [payload] execute_payloads thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,623 | INFO     | [job] job monitor thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,712 | INFO     | [data] control thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,758 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:26,854 | INFO     | [payload] control thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,003 | INFO     | [payload] validate_post thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,224 | INFO     | [job] control thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,304 | INFO     | [job] validate thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-26 13:17:03] 2026-05-26 20:16:27,419 | INFO     | [job] create_data_payload thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,438 | INFO     | [payload] failed_post thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,482 | INFO     | [data] copytool_out thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,489 | INFO     | [payload] validate_pre thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:27,562 | INFO     | [data] copytool_in thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:31,421 | INFO     | [data] queue_monitor thread has finished
[2026-05-26 13:17:03] 2026-05-26 20:16:55,398 | INFO     | PID=1627663 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-26 13:17:03] 2026-05-26 20:16:55,398 | INFO     | .. there are 7 such processes running
[2026-05-26 13:17:03] 2026-05-26 20:16:55,399 | INFO     | found 0 job(s) in 20 queues
[2026-05-26 13:17:03] 2026-05-26 20:16:55,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-26 13:17:03] 2026-05-26 20:16:55,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-26 13:17:03] 2026-05-26 20:16:58,195 | INFO     | [monitor] cgroup control has ended
[2026-05-26 13:17:03] 2026-05-26 20:16:58,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137755755616064)>', '<ExcThread(monitor, started 137755086542592)>']
[2026-05-26 13:17:03] 2026-05-26 20:16:58,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-26 13:17:03] 2026-05-26 20:16:58,409 | INFO     | [monitor] control thread has ended
[2026-05-26 13:17:03] 2026-05-26 20:17:03,367 | INFO     | all workflow threads have been joined
[2026-05-26 13:17:03] 2026-05-26 20:17:03,367 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-26 13:17:03] 2026-05-26 20:17:03,367 | INFO     | traces error code: 0
[2026-05-26 13:17:03] 2026-05-26 20:17:03,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-26 13:17:03] 2026-05-26 20:17:03,433 [wrapper] ==== pilot stdout END ====
[2026-05-26 13:17:03] 2026-05-26 20:17:03,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-26 13:17:03] 2026-05-26 20:17:03,435 [wrapper] pilotpid: 1627663
[2026-05-26 13:17:03] 2026-05-26 20:17:03,437 [wrapper] Pilot exit status: 0
[2026-05-26 13:17:03] 2026-05-26 20:17:03,441 [wrapper] pandaids: 7153643235
[2026-05-26 13:17:03] 2026-05-26 20:17:03,464 [wrapper] cleanup supervisor_pilot 1688056 1627664
[2026-05-26 13:17:03] 2026-05-26 20:17:03,465 [wrapper] Test setup, not cleaning
[2026-05-26 13:17:03] 2026-05-26 20:17:03,467 [wrapper] apfmon messages muted
[2026-05-26 13:17:03] 2026-05-26 20:17:03,468 [wrapper] ==== wrapper stdout END ====
[2026-05-26 13:17:03] 2026-05-26 20:17:03,469 [wrapper] ==== wrapper stderr END ====
[2026-05-26 13:17:03]  *** Error codes and diagnostics ***
[2026-05-26 13:17:03]     "exeErrorCode": 0,
[2026-05-26 13:17:03]     "pilotErrorCode": 0,
[2026-05-26 13:17:03]  *** Listing of results directory ***
[2026-05-26 13:17:03] total 432748
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc    683926 May 26 04:17 pilot3.tar.gz
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc      5631 May 26 04:37 queuedata.json
[2026-05-26 13:17:03] -rwx------ 1 boinc boinc     36281 May 26 04:37 runpilot2-wrapper.sh
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc       100 May 26 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-26 13:17:03] -rwxr-xr-x 1 boinc boinc      7986 May 26 12:05 run_atlas
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc       105 May 26 12:05 job.xml
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc 265950406 May 26 12:05 EVNT.49539704._000046.pool.root.1
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc    697426 May 26 12:05 input.tar.gz
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc     15667 May 26 12:05 start_atlas.sh
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc         0 May 26 12:05 boinc_setup_complete
[2026-05-26 13:17:03] drwxrwx--x 2 boinc boinc      4096 May 26 12:05 shared
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc     10120 May 26 12:05 init_data.xml
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc         0 May 26 12:05 boinc_lockfile
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc      2574 May 26 12:05 pandaJob.out
[2026-05-26 13:17:03] -rw------- 1 boinc boinc    996441 May 26 12:05 agis_schedconf.cvmfs.json
[2026-05-26 13:17:03] -rw------- 1 boinc boinc   1502789 May 26 12:05 agis_ddmendpoints.agis.ALL.json
[2026-05-26 13:17:03] -rw------- 1 boinc boinc       429 May 26 12:05 workernode_map.json
[2026-05-26 13:17:03] drwx------ 5 boinc boinc      4096 May 26 12:05 pilot3
[2026-05-26 13:17:03] -rw------- 1 boinc boinc 171696600 May 26 13:16 HITS.49545126._001314.pool.root.1
[2026-05-26 13:17:03] -rw------- 1 boinc boinc      1032 May 26 13:16 memory_monitor_summary.json
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc       487 May 26 13:16 boinc_task_state.xml
[2026-05-26 13:17:03] -rw------- 1 boinc boinc    235691 May 26 13:16 log.49545126._001314.job.log.tgz.1
[2026-05-26 13:17:03] -rw------- 1 boinc boinc      6314 May 26 13:16 heartbeat_new.json
[2026-05-26 13:17:03] -rw------- 1 boinc boinc      6205 May 26 13:16 heartbeat.json
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc      8192 May 26 13:16 boinc_mmap_file
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc        27 May 26 13:16 wrapper_checkpoint.txt
[2026-05-26 13:17:03] -rw------- 1 boinc boinc        95 May 26 13:16 pilot_heartbeat.json
[2026-05-26 13:17:03] -rw------- 1 boinc boinc      5017 May 26 13:17 pilotlog.txt
[2026-05-26 13:17:03] -rw------- 1 boinc boinc    439796 May 26 13:17 log.49545126._001314.job.log.1
[2026-05-26 13:17:03] -rw------- 1 boinc boinc       357 May 26 13:17 output.list
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc       410 May 26 13:17 runtime_log
[2026-05-26 13:17:03] -rw------- 1 boinc boinc    696320 May 26 13:17 result.tar.gz
[2026-05-26 13:17:03] -rw------- 1 boinc boinc       656 May 26 13:17 85f1ede2f911.diag
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc      8586 May 26 13:17 runtime_log.err
[2026-05-26 13:17:03] -rw-r--r-- 1 boinc boinc     22522 May 26 13:17 stderr.txt
[2026-05-26 13:17:03] HITS file was successfully produced:
[2026-05-26 13:17:03] -rw------- 1 boinc boinc 171696600 May 26 13:16 shared/HITS.pool.root.1
[2026-05-26 13:17:03]  *** Contents of shared directory: ***
[2026-05-26 13:17:03] total 428784
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc 265950406 May 26 12:05 ATLAS.root_0
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc    697426 May 26 12:05 input.tar.gz
[2026-05-26 13:17:03] -rw-r--r-- 2 boinc boinc     15667 May 26 12:05 start_atlas.sh
[2026-05-26 13:17:03] -rw------- 1 boinc boinc 171696600 May 26 13:16 HITS.pool.root.1
[2026-05-26 13:17:03] -rw------- 1 boinc boinc    696320 May 26 13:17 result.tar.gz
13:17:04 (1621154): run_atlas exited; CPU time 16068.992357
13:17:04 (1621154): called boinc_finish(0)

</stderr_txt>
]]>

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