Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:04 (1525271): wrapper (7.7.26015): starting
03:00:04 (1525271): wrapper: running run_atlas (--nthreads 12)
[2026-05-22 03:00:04] Arguments: --nthreads 12
[2026-05-22 03:00:04] Threads: 12
[2026-05-22 03:00:04] Checking for CVMFS
[2026-05-22 03:00:04] No cvmfs_config command found, will try listing directly
[2026-05-22 03:00:04] CVMFS is ok
[2026-05-22 03:00:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-22 03:00:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-22 03:00:04] Further information can be found at the LHC@home message board.
[2026-05-22 03:00:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-22 03:00:04] Checking for apptainer binary...
[2026-05-22 03:00:04] which: no apptainer in ((null))
[2026-05-22 03:00:04] apptainer is not installed, using version from CVMFS
[2026-05-22 03:00:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-22 03:00:04] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-05-22 03:00:04] apptainer works
[2026-05-22 03:00:04] Set ATHENA_PROC_NUMBER=12
[2026-05-22 03:00:04] Set ATHENA_CORE_NUMBER=12
[2026-05-22 03:00:04] Starting ATLAS job with PandaID=7148366551
[2026-05-22 03:00:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-22 03:33:31]  *** The last 200 lines of the pilot log: ***
[2026-05-22 03:33:31]  scope=mc23_13p6TeV
[2026-05-22 03:33:31]  status=None
[2026-05-22 03:33:31]  status_code=0
[2026-05-22 03:33:31]  storage_token=
[2026-05-22 03:33:31]  surl=/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/log.50391998._002881.job.log.tgz.1
[2026-05-22 03:33:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/d6/log.50391998._002881.job.log.tgz.1
[2026-05-22 03:33:31]  workdir=None
[2026-05-22 03:33:31] ]
[2026-05-22 03:33:31] 2026-05-22 01:32:54,733 | INFO     | transferring file log.50391998._002881.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/log.50391998._002881.job.log.tgz.1 to /var/lib/
[2026-05-22 03:33:31] 2026-05-22 01:32:54,734 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/log.50391998._002881.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/1/
[2026-05-22 03:33:31] 2026-05-22 01:32:54,748 | INFO     | adding to output.list: log.50391998._002881.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/d6/log.50391998._002881.job.log.tg
[2026-05-22 03:33:31] 2026-05-22 01:32:54,748 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-22 03:33:31] 2026-05-22 01:32:54,748 | INFO     | summary of transferred files:
[2026-05-22 03:33:31] 2026-05-22 01:32:54,748 | INFO     |  -- lfn=log.50391998._002881.job.log.tgz.1, status_code=0, status=transferred
[2026-05-22 03:33:31] 2026-05-22 01:32:54,748 | INFO     | stage-out finished correctly
[2026-05-22 03:33:31] 2026-05-22 01:32:56,280 | INFO     | PID=1529793 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-22 03:33:31] 2026-05-22 01:32:56,280 | INFO     | .. there are 14 such processes running
[2026-05-22 03:33:31] 2026-05-22 01:32:57,017 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-22 03:33:31] 2026-05-22 01:32:57,092 | INFO     | job 7148366551 has state=finished
[2026-05-22 03:33:31] 2026-05-22 01:32:57,092 | INFO     | preparing for final server update for job 7148366551 in state='finished'
[2026-05-22 03:33:31] 2026-05-22 01:32:57,622 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,622 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/jobReport.json
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/1/workernode_map.json
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | this job has now completed (state=finished)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | log transfer has been attempted: DONE
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | job 7148366551 has finished - writing final server update
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_47619/.job.ad'
[2026-05-22 03:33:31] 2026-05-22 01:32:57,624 | INFO     | total number of processed events: 400 (read)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,644 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/memory_monitor_summary.json (trf name=prmon)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,645 | INFO     | extracted standard info from prmon json
[2026-05-22 03:33:31] 2026-05-22 01:32:57,645 | INFO     | extracted standard memory fields from prmon json
[2026-05-22 03:33:31] 2026-05-22 01:32:57,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-22 03:33:31] 2026-05-22 01:32:57,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | fitting pss+swap vs Time
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | sum of square deviations: 4837300.0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | sum of deviations: -10527319.0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | mean x (centered): 0.0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | mean y: 2740107.2
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | intersect: 2740107.2
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | chi2: 0.0003275663892123843
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | current memory leak: -2.18 B/s (using 25 data points, chi2=0.00)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | could have reported an average CPU frequency of 3566 MHz (5 samples)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | ..............................
[2026-05-22 03:33:31] 2026-05-22 01:32:57,646 | INFO     | . Timing measurements:
[2026-05-22 03:33:31] 2026-05-22 01:32:57,649 | INFO     | . get job = 0 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,649 | INFO     | . initial setup = 4 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,649 | INFO     | . payload setup = 6 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,650 | INFO     | . stage-in = 0 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,650 | INFO     | . payload execution = 1937 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,650 | INFO     | . stage-out = 0 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,650 | INFO     | . log creation = 0 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,650 | INFO     | ..............................
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | 
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | job summary report
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | --------------------------------------------------
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | PanDA job id: 7148366551
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | task id: 50391998
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | errors: (none)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | pilot state: finished 
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | transexitcode: 0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | exeerrorcode: 0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | exeerrordiag: 
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | exitcode: 0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | exitmsg: OK
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | cpuconsumptiontime: 20254 s
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | nevents: 400
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | neventsw: 0
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | pid: 1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:57,697 | INFO     | pgrp: 1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | corecount: 12
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | event service: False
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | sizes: {0: 2267723, 11: 2267723, 1947: 2292680, 1948: 2301702, 1950: 2301984}
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | --------------------------------------------------
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | 
[2026-05-22 03:33:31] 2026-05-22 01:32:57,698 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/1
[2026-05-22 03:33:31] 2026-05-22 01:32:57,720 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | job 7148366551 has completed (purged errors)
[2026-05-22 03:33:31] 2026-05-22 01:32:57,721 | INFO     | overall cleanup function is called
[2026-05-22 03:33:31] 2026-05-22 01:32:57,962 | WARNING  | process 1535530 can no longer be monitored (due to stat problems) - aborting
[2026-05-22 03:33:31] 2026-05-22 01:32:58,212 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-22 03:33:31] 2026-05-22 01:32:58,212 | INFO     | using path: /var/lib/boinc/var/slot144/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-22 03:33:31] 2026-05-22 01:32:58,212 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-22 03:33:31] 2026-05-22 01:32:58,212 | WARNING  | maxPSS not found in memory monitor output
[2026-05-22 03:33:31] 2026-05-22 01:32:58,213 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/payload.stdout) since it has not been created yet
[2026-05-22 03:33:31] 2026-05-22 01:32:58,213 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-05-22 03:33:31] 2026-05-22 01:32:58,225 | INFO     | sufficient remaining disk space (211950764032 B)
[2026-05-22 03:33:31] 2026-05-22 01:32:58,226 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-05-22 03:33:31] 2026-05-22 01:32:58,226 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot144/slots/1/PanDA_Pilot-7148366551/HITS.50391998._002881.pool.root.1 since it does not exist
[2026-05-22 03:33:31] 2026-05-22 01:32:58,508 | INFO     | number of running child processes to parent process 1535530: 1
[2026-05-22 03:33:31] 2026-05-22 01:32:58,509 | INFO     | maximum number of monitored processes: 6
[2026-05-22 03:33:31] 2026-05-22 01:32:58,509 | INFO     | aborting job monitoring since job object (job id=7148366551) has expired
[2026-05-22 03:33:31] 2026-05-22 01:32:58,730 | INFO     | --- collectZombieJob: --- 10, [1535530]
[2026-05-22 03:33:31] 2026-05-22 01:32:58,730 | INFO     | zombie collector waiting for pid 1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:58,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-22 03:33:31] 2026-05-22 01:32:58,730 | INFO     | collected zombie processes
[2026-05-22 03:33:31] 2026-05-22 01:32:58,730 | INFO     | will attempt to kill all subprocesses of pid=1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:59,002 | INFO     | process IDs to be killed: [1535530] (in reverse order)
[2026-05-22 03:33:31] 2026-05-22 01:32:59,144 | WARNING  | found no corresponding commands to process id(s)
[2026-05-22 03:33:31] 2026-05-22 01:32:59,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-22 03:33:31] 2026-05-22 01:32:59,166 | INFO     | did not find any defunct processes belonging to 1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:59,186 | INFO     | did not find any defunct processes belonging to 1535530
[2026-05-22 03:33:31] 2026-05-22 01:32:59,187 | INFO     | Ready for new job
[2026-05-22 03:33:31] 2026-05-22 01:32:59,187 | INFO     | ***************************************
[2026-05-22 03:33:31] 2026-05-22 01:32:59,188 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-22 03:33:31] 2026-05-22 01:32:59,188 | INFO     | ***************************************
[2026-05-22 03:33:31] 2026-05-22 01:32:59,188 | INFO     | 
[2026-05-22 03:33:31] 2026-05-22 01:32:59,193 | INFO     | architecture information:
[2026-05-22 03:33:31] 2026-05-22 01:32:59,193 | INFO     | executing command: cat /etc/os-release
[2026-05-22 03:33:31] 2026-05-22 01:32:59,207 | INFO     | cat /etc/os-release:
[2026-05-22 03:33:31] NAME="CentOS Linux"
[2026-05-22 03:33:31] VERSION="7 (Core)"
[2026-05-22 03:33:31] ID="centos"
[2026-05-22 03:33:31] ID_LIKE="rhel fedora"
[2026-05-22 03:33:31] VERSION_ID="7"
[2026-05-22 03:33:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-22 03:33:31] ANSI_COLOR="0;31"
[2026-05-22 03:33:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-22 03:33:31] HOME_URL="https://www.centos.org/"
[2026-05-22 03:33:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-22 03:33:31] 
[2026-05-22 03:33:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-22 03:33:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-22 03:33:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-22 03:33:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-22 03:33:31] 
[2026-05-22 03:33:31] 2026-05-22 01:32:59,207 | INFO     | ***************************************
[2026-05-22 03:33:31] 2026-05-22 01:32:59,710 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/1
[2026-05-22 03:33:31] 2026-05-22 01:32:59,723 | INFO     | sufficient remaining disk space (211948666880 B)
[2026-05-22 03:33:31] 2026-05-22 01:32:59,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-22 03:33:31] 2026-05-22 01:32:59,724 | INFO     | current server update state: UPDATING_FINAL
[2026-05-22 03:33:31] 2026-05-22 01:32:59,724 | INFO     | update_server=False
[2026-05-22 03:33:31] 2026-05-22 01:32:59,724 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-22 03:33:31] 2026-05-22 01:32:59,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-22 03:33:31] 2026-05-22 01:32:59,724 | INFO     | aborting loop
[2026-05-22 03:33:31] 2026-05-22 01:33:00,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-22 03:33:31] 2026-05-22 01:33:00,729 | INFO     | [job] retrieve thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:00,729 | INFO     | [job] job monitor thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:00,806 | INFO     | all data control threads have been joined
[2026-05-22 03:33:31] 2026-05-22 01:33:00,900 | INFO     | all job control threads have been joined
[2026-05-22 03:33:31] 2026-05-22 01:33:01,015 | INFO     | [payload] execute_payloads thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,175 | INFO     | [job] validate thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,196 | INFO     | all payload control threads have been joined
[2026-05-22 03:33:31] 2026-05-22 01:33:01,307 | INFO     | [job] create_data_payload thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,340 | INFO     | [payload] validate_pre thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,444 | INFO     | [payload] validate_post thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,586 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,681 | INFO     | [data] copytool_in thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,811 | INFO     | [data] control thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:01,901 | INFO     | [job] control thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:02,079 | INFO     | [payload] failed_post thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:02,201 | INFO     | [payload] control thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:02,307 | INFO     | [data] copytool_out thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:02,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-22 03:33:31] 2026-05-22 01:33:03,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-22 03:33:31] 2026-05-22 01:33:03,712 | INFO     | [job] queue monitor thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:07,075 | INFO     | [data] queue_monitor thread has finished
[2026-05-22 03:33:31] 2026-05-22 01:33:18,670 | INFO     | [monitor] cgroup control has ended
[2026-05-22 03:33:31] 2026-05-22 01:33:20,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22633568986944)>', '<ExcThread(monitor, started 22633263384320)>']
[2026-05-22 03:33:31] 2026-05-22 01:33:25,343 | INFO     | all workflow threads have been joined
[2026-05-22 03:33:31] 2026-05-22 01:33:25,343 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-22 03:33:31] 2026-05-22 01:33:25,343 | INFO     | traces error code: 0
[2026-05-22 03:33:31] 2026-05-22 01:33:25,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | INFO     | PID=1529793 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | INFO     | .. there are 14 such processes running
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | INFO     | found 0 job(s) in 20 queues
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-22 03:33:31] 2026-05-22 01:33:30,784 | INFO     | [monitor] control thread has ended
[2026-05-22 03:33:31] 2026-05-22 01:33:30,979 [wrapper] ==== pilot stdout END ====
[2026-05-22 03:33:31] 2026-05-22 01:33:30,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-22 03:33:31] 2026-05-22 01:33:30,984 [wrapper] pilotpid: 1529793
[2026-05-22 03:33:31] 2026-05-22 01:33:30,986 [wrapper] Pilot exit status: 0
[2026-05-22 03:33:31] 2026-05-22 01:33:30,993 [wrapper] pandaids: 7148366551
[2026-05-22 03:33:31] 2026-05-22 01:33:31,088 [wrapper] cleanup supervisor_pilot 1762684 1529794
[2026-05-22 03:33:31] 2026-05-22 01:33:31,091 [wrapper] Test setup, not cleaning
[2026-05-22 03:33:31] 2026-05-22 01:33:31,093 [wrapper] apfmon messages muted
[2026-05-22 03:33:31] 2026-05-22 01:33:31,095 [wrapper] ==== wrapper stdout END ====
[2026-05-22 03:33:31] 2026-05-22 01:33:31,097 [wrapper] ==== wrapper stderr END ====
[2026-05-22 03:33:31]  *** Error codes and diagnostics ***
[2026-05-22 03:33:31]     "exeErrorCode": 0,
[2026-05-22 03:33:31]     "pilotErrorCode": 0,
[2026-05-22 03:33:31]  *** Listing of results directory ***
[2026-05-22 03:33:31] total 477752
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc    683926 May 21 08:38 pilot3.tar.gz
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc      5631 May 21 08:39 queuedata.json
[2026-05-22 03:33:31] -rwx------. 1 boinc boinc     36281 May 21 08:42 runpilot2-wrapper.sh
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc       100 May 22 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-22 03:33:31] -rwxr-xr-x. 1 boinc boinc      7986 May 22 02:59 run_atlas
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc       105 May 22 02:59 job.xml
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc      6629 May 22 03:00 init_data.xml
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc 266506875 May 22 03:00 EVNT.50391994._000116.pool.root.1
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc     15667 May 22 03:00 start_atlas.sh
[2026-05-22 03:33:31] drwxrwx--x. 2 boinc boinc      4096 May 22 03:00 shared
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc    697437 May 22 03:00 input.tar.gz
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc         0 May 22 03:00 boinc_lockfile
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc      2620 May 22 03:00 pandaJob.out
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc    994414 May 22 03:00 agis_schedconf.cvmfs.json
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc   1502787 May 22 03:00 agis_ddmendpoints.agis.ALL.json
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc       445 May 22 03:00 workernode_map.json
[2026-05-22 03:33:31] drwx------. 5 boinc boinc      4096 May 22 03:00 pilot3
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc 217454083 May 22 03:32 HITS.50391998._002881.pool.root.1
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc       487 May 22 03:32 boinc_task_state.xml
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc      1029 May 22 03:32 memory_monitor_summary.json
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc        95 May 22 03:32 pilot_heartbeat.json
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc    337978 May 22 03:32 log.50391998._002881.job.log.tgz.1
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc      6375 May 22 03:32 heartbeat_new.json
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc      6266 May 22 03:32 heartbeat.json
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc      8192 May 22 03:33 boinc_mmap_file
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc        27 May 22 03:33 wrapper_checkpoint.txt
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc       823 May 22 03:33 pilotlog.txt
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc    232751 May 22 03:33 log.50391998._002881.job.log.1
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc       357 May 22 03:33 output.list
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc       410 May 22 03:33 runtime_log
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc    583680 May 22 03:33 result.tar.gz
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc      8846 May 22 03:33 runtime_log.err
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc       661 May 22 03:33 a94c8002b9c8.diag
[2026-05-22 03:33:31] -rw-r--r--. 1 boinc boinc     22036 May 22 03:33 stderr.txt
[2026-05-22 03:33:31] HITS file was successfully produced:
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc 217454083 May 22 03:32 shared/HITS.pool.root.1
[2026-05-22 03:33:31]  *** Contents of shared directory: ***
[2026-05-22 03:33:31] total 473904
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc 266506875 May 22 03:00 ATLAS.root_0
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc     15667 May 22 03:00 start_atlas.sh
[2026-05-22 03:33:31] -rw-r--r--. 2 boinc boinc    697437 May 22 03:00 input.tar.gz
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc 217454083 May 22 03:32 HITS.pool.root.1
[2026-05-22 03:33:31] -rw-------. 1 boinc boinc    583680 May 22 03:33 result.tar.gz
03:33:32 (1525271): run_atlas exited; CPU time 20308.238773
03:33:32 (1525271): called boinc_finish(0)

</stderr_txt>
]]>

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