Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:17:25 (3587360): wrapper (7.7.26015): starting
01:17:25 (3587360): wrapper: running run_atlas (--nthreads 3)
[2026-05-19 01:17:25] Arguments: --nthreads 3
[2026-05-19 01:17:25] Threads: 3
[2026-05-19 01:17:25] Checking for CVMFS
[2026-05-19 01:17:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-19 01:17:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-19 01:17:26] Running cvmfs_config stat atlas.cern.ch
[2026-05-19 01:17:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-19 01:17:26] 2.9.2.0 3529381 348 60492 159652 0 50 20133189 36864000 0 130560 0 220017 99.984 10918 18136 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-19 01:17:26] CVMFS is ok
[2026-05-19 01:17:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-19 01:17:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-19 01:17:26] Further information can be found at the LHC@home message board.
[2026-05-19 01:17:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-19 01:17:26] Checking for apptainer binary...
[2026-05-19 01:17:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-19 01:17:26] Running /usr/bin/apptainer --version
[2026-05-19 01:17:26] apptainer version 1.4.1-1.1
[2026-05-19 01:17:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-19 01:17:26] magicA161a
[2026-05-19 01:17:26] apptainer works
[2026-05-19 01:17:26] Set ATHENA_PROC_NUMBER=3
[2026-05-19 01:17:26] Set ATHENA_CORE_NUMBER=3
[2026-05-19 01:17:26] Starting ATLAS job with PandaID=7143420473
[2026-05-19 01:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-19 02:50:49]  *** The last 200 lines of the pilot log: ***
[2026-05-19 02:50:49]  direct_access_wan=False
[2026-05-19 02:50:49]  domain=
[2026-05-19 02:50:49]  filesize=253976
[2026-05-19 02:50:49]  filetype=log
[2026-05-19 02:50:49]  guid=4d21ae0d-b1fe-44b0-93ef-bd07d888e39a
[2026-05-19 02:50:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-19 02:50:49]  is_altstaged=None
[2026-05-19 02:50:49]  is_tar=False
[2026-05-19 02:50:49]  lfn=log.50340623._001476.job.log.tgz.1
[2026-05-19 02:50:49]  mtime=0
[2026-05-19 02:50:49]  protocol_id=None
[2026-05-19 02:50:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-19 02:50:49]  replicas=None
[2026-05-19 02:50:49]  scope=mc23_13p6TeV
[2026-05-19 02:50:49]  status=None
[2026-05-19 02:50:49]  status_code=0
[2026-05-19 02:50:49]  storage_token=
[2026-05-19 02:50:49]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7143420473/log.50340623._001476.job.log.tgz.1
[2026-05-19 02:50:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/b9/log.50340623._001476.job.log.tgz.1
[2026-05-19 02:50:49]  workdir=None
[2026-05-19 02:50:49] ]
[2026-05-19 02:50:49] 2026-05-19 00:50:09,436 | INFO     | transferring file log.50340623._001476.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7143420473/log.50340623._001476.job.log.tgz.1 to /local/data/boinc/
[2026-05-19 02:50:49] 2026-05-19 00:50:09,436 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7143420473/log.50340623._001476.job.log.tgz.1 /local/data/boinc/slots/0/log.50340623._0014
[2026-05-19 02:50:49] 2026-05-19 00:50:09,451 | INFO     | adding to output.list: log.50340623._001476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/b9/log.50340623._001476.job.log.tg
[2026-05-19 02:50:49] 2026-05-19 00:50:09,451 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-19 02:50:49] 2026-05-19 00:50:09,451 | INFO     | summary of transferred files:
[2026-05-19 02:50:49] 2026-05-19 00:50:09,451 | INFO     |  -- lfn=log.50340623._001476.job.log.tgz.1, status_code=0, status=transferred
[2026-05-19 02:50:49] 2026-05-19 00:50:09,452 | INFO     | stage-out finished correctly
[2026-05-19 02:50:49] 2026-05-19 00:50:09,997 | WARNING  | process 3595837 can no longer be monitored (due to stat problems) - aborting
[2026-05-19 02:50:49] 2026-05-19 00:50:09,997 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7143420473/memory_monitor_summary.json (trf name=prmon)
[2026-05-19 02:50:49] 2026-05-19 00:50:10,022 | INFO     | number of running child processes to parent process 3595837: 1
[2026-05-19 02:50:49] 2026-05-19 00:50:10,022 | INFO     | maximum number of monitored processes: 6
[2026-05-19 02:50:49] 2026-05-19 00:50:11,252 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-19 02:50:49] 2026-05-19 00:50:11,282 | INFO     | job 7143420473 has state=finished
[2026-05-19 02:50:49] 2026-05-19 00:50:11,282 | INFO     | preparing for final server update for job 7143420473 in state='finished'
[2026-05-19 02:50:49] 2026-05-19 00:50:11,282 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7143420473/jobReport.json
[2026-05-19 02:50:49] 2026-05-19 00:50:11,283 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-05-19 02:50:49] 2026-05-19 00:50:11,283 | INFO     | this job has now completed (state=finished)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,283 | INFO     | log transfer has been attempted: DONE
[2026-05-19 02:50:49] 2026-05-19 00:50:11,283 | INFO     | job 7143420473 has finished - writing final server update
[2026-05-19 02:50:49] 2026-05-19 00:50:11,284 | INFO     | total number of processed events: 400 (read)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,285 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7143420473/memory_monitor_summary.json (trf name=prmon)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,285 | INFO     | extracted standard info from prmon json
[2026-05-19 02:50:49] 2026-05-19 00:50:11,285 | INFO     | extracted standard memory fields from prmon json
[2026-05-19 02:50:49] 2026-05-19 00:50:11,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-19 02:50:49] 2026-05-19 00:50:11,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | fitting pss+swap vs Time
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | sum of square deviations: 183761585.0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | sum of deviations: -7674582203.000001
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | mean x (centered): 0.0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | mean y: 2476124.261904762
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | intersect: 2476124.261904762
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | chi2: 0.440278054987593
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | current memory leak: -41.76 B/s (using 84 data points, chi2=0.44)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | could have reported an average CPU frequency of 3661 MHz (7 samples)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | ..............................
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | . Timing measurements:
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | . get job = 0 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | . initial setup = 3 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | . payload setup = 5 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,286 | INFO     | . stage-in = 0 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,287 | INFO     | . payload execution = 5533 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,287 | INFO     | . stage-out = 0 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,287 | INFO     | . log creation = 0 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,287 | INFO     | ..............................
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | 
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | job summary report
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | --------------------------------------------------
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | PanDA job id: 7143420473
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | task id: 50340623
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | errors: (none)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | pilot state: finished 
[2026-05-19 02:50:49] 2026-05-19 00:50:11,313 | INFO     | transexitcode: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | exeerrorcode: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | exeerrordiag: 
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | exitcode: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | exitmsg: OK
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | cpuconsumptiontime: 15239 s
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | nevents: 400
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | neventsw: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | pid: 3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | pgrp: 3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | corecount: 3
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | event service: False
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | sizes: {0: 2267652, 11: 2267652, 5541: 2303425, 5543: 2303619}
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | --------------------------------------------------
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | 
[2026-05-19 02:50:49] 2026-05-19 00:50:11,314 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | job 7143420473 has completed (purged errors)
[2026-05-19 02:50:49] 2026-05-19 00:50:11,329 | INFO     | overall cleanup function is called
[2026-05-19 02:50:49] 2026-05-19 00:50:12,335 | INFO     | --- collectZombieJob: --- 10, [3595837]
[2026-05-19 02:50:49] 2026-05-19 00:50:12,335 | INFO     | zombie collector waiting for pid 3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:12,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-19 02:50:49] 2026-05-19 00:50:12,335 | INFO     | collected zombie processes
[2026-05-19 02:50:49] 2026-05-19 00:50:12,335 | INFO     | will attempt to kill all subprocesses of pid=3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:12,366 | INFO     | process IDs to be killed: [3595837] (in reverse order)
[2026-05-19 02:50:49] 2026-05-19 00:50:12,390 | WARNING  | found no corresponding commands to process id(s)
[2026-05-19 02:50:49] 2026-05-19 00:50:12,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-19 02:50:49] 2026-05-19 00:50:12,392 | INFO     | did not find any defunct processes belonging to 3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:12,393 | INFO     | did not find any defunct processes belonging to 3595837
[2026-05-19 02:50:49] 2026-05-19 00:50:12,393 | INFO     | Ready for new job
[2026-05-19 02:50:49] 2026-05-19 00:50:12,393 | INFO     | ***************************************
[2026-05-19 02:50:49] 2026-05-19 00:50:12,394 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-19 02:50:49] 2026-05-19 00:50:12,394 | INFO     | ***************************************
[2026-05-19 02:50:49] 2026-05-19 00:50:12,394 | INFO     | 
[2026-05-19 02:50:49] 2026-05-19 00:50:12,394 | INFO     | architecture information:
[2026-05-19 02:50:49] 2026-05-19 00:50:12,394 | INFO     | executing command: cat /etc/os-release
[2026-05-19 02:50:49] 2026-05-19 00:50:12,403 | INFO     | cat /etc/os-release:
[2026-05-19 02:50:49] NAME="CentOS Linux"
[2026-05-19 02:50:49] VERSION="7 (Core)"
[2026-05-19 02:50:49] ID="centos"
[2026-05-19 02:50:49] ID_LIKE="rhel fedora"
[2026-05-19 02:50:49] VERSION_ID="7"
[2026-05-19 02:50:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-19 02:50:49] ANSI_COLOR="0;31"
[2026-05-19 02:50:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-19 02:50:49] HOME_URL="https://www.centos.org/"
[2026-05-19 02:50:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-19 02:50:49] 
[2026-05-19 02:50:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-19 02:50:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-19 02:50:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-19 02:50:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-19 02:50:49] 
[2026-05-19 02:50:49] 2026-05-19 00:50:12,404 | INFO     | ***************************************
[2026-05-19 02:50:49] 2026-05-19 00:50:12,907 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-19 02:50:49] 2026-05-19 00:50:12,919 | INFO     | sufficient remaining disk space (380446441472 B)
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | INFO     | current server update state: UPDATING_FINAL
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | INFO     | update_server=False
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-19 02:50:49] 2026-05-19 00:50:12,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-19 02:50:49] 2026-05-19 00:50:13,231 | INFO     | all job control threads have been joined
[2026-05-19 02:50:49] 2026-05-19 00:50:13,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-19 02:50:49] 2026-05-19 00:50:13,531 | INFO     | aborting loop
[2026-05-19 02:50:49] 2026-05-19 00:50:13,532 | INFO     | all payload control threads have been joined
[2026-05-19 02:50:49] 2026-05-19 00:50:13,633 | INFO     | all data control threads have been joined
[2026-05-19 02:50:49] 2026-05-19 00:50:13,925 | INFO     | [job] retrieve thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:13,926 | INFO     | [job] queue monitor thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,197 | INFO     | [payload] failed_post thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,236 | INFO     | [job] control thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,537 | INFO     | [job] job monitor thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,538 | INFO     | [payload] control thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,639 | INFO     | [data] control thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,674 | INFO     | [payload] execute_payloads thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,847 | INFO     | [job] validate thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,926 | INFO     | [data] copytool_out thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:14,963 | INFO     | [job] create_data_payload thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:15,004 | INFO     | [payload] validate_post thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:15,069 | INFO     | [payload] validate_pre thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:15,084 | INFO     | [data] copytool_in thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:16,927 | INFO     | [data] queue_monitor thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:23,599 | INFO     | job.realtimelogging is not enabled
[2026-05-19 02:50:49] 2026-05-19 00:50:24,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-19 02:50:49] 2026-05-19 00:50:43,355 | INFO     | PID=3591401 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-19 02:50:49] 2026-05-19 00:50:43,355 | INFO     | found 0 job(s) in 20 queues
[2026-05-19 02:50:49] 2026-05-19 00:50:43,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-19 02:50:49] 2026-05-19 00:50:43,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-19 02:50:49] 2026-05-19 00:50:44,079 | INFO     | [monitor] cgroup control has ended
[2026-05-19 02:50:49] 2026-05-19 00:50:44,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655251076928)>', '<ExcThread(monitor, started 140654902486784)>']
[2026-05-19 02:50:49] 2026-05-19 00:50:45,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-19 02:50:49] 2026-05-19 00:50:45,366 | INFO     | [monitor] control thread has ended
[2026-05-19 02:50:49] 2026-05-19 00:50:49,623 | INFO     | all workflow threads have been joined
[2026-05-19 02:50:49] 2026-05-19 00:50:49,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-19 02:50:49] 2026-05-19 00:50:49,623 | INFO     | traces error code: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:49,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-19 02:50:49] 2026-05-19 00:50:49,676 [wrapper] ==== pilot stdout END ====
[2026-05-19 02:50:49] 2026-05-19 00:50:49,679 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-19 02:50:49] 2026-05-19 00:50:49,681 [wrapper] pilotpid: 3591401
[2026-05-19 02:50:49] 2026-05-19 00:50:49,684 [wrapper] Pilot exit status: 0
[2026-05-19 02:50:49] 2026-05-19 00:50:49,691 [wrapper] pandaids: 7143420473
[2026-05-19 02:50:49] 2026-05-19 00:50:49,708 [wrapper] cleanup supervisor_pilot 3601299 3591402
[2026-05-19 02:50:49] 2026-05-19 00:50:49,710 [wrapper] Test setup, not cleaning
[2026-05-19 02:50:49] 2026-05-19 00:50:49,713 [wrapper] apfmon messages muted
[2026-05-19 02:50:49] 2026-05-19 00:50:49,715 [wrapper] ==== wrapper stdout END ====
[2026-05-19 02:50:49] 2026-05-19 00:50:49,718 [wrapper] ==== wrapper stderr END ====
[2026-05-19 02:50:49]  *** Error codes and diagnostics ***
[2026-05-19 02:50:49]     "exeErrorCode": 0,
[2026-05-19 02:50:49]     "pilotErrorCode": 0,
[2026-05-19 02:50:49]  *** Listing of results directory ***
[2026-05-19 02:50:49] total 627052
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc      5631 May 18 19:52 queuedata.json
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc    683926 May 18 19:52 pilot3.tar.gz
[2026-05-19 02:50:49] -rwx------ 1 boinc boinc     36281 May 18 19:52 runpilot2-wrapper.sh
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc       100 May 19 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-19 02:50:49] -rwxr-xr-x 1 boinc boinc      7986 May 19 01:17 run_atlas
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc       105 May 19 01:17 job.xml
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc 444564509 May 19 01:17 EVNT.47837091._001536.pool.root.1
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc    697423 May 19 01:17 input.tar.gz
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc     15667 May 19 01:17 start_atlas.sh
[2026-05-19 02:50:49] drwxrwx--x 2 boinc boinc      4096 May 19 01:17 shared
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc         0 May 19 01:17 boinc_setup_complete
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc      6364 May 19 01:17 init_data.xml
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc         0 May 19 01:17 boinc_lockfile
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc      2584 May 19 01:17 pandaJob.out
[2026-05-19 02:50:49] -rw------- 1 boinc boinc    998419 May 19 01:17 agis_schedconf.cvmfs.json
[2026-05-19 02:50:49] -rw------- 1 boinc boinc   1502787 May 19 01:17 agis_ddmendpoints.agis.ALL.json
[2026-05-19 02:50:49] -rw------- 1 boinc boinc       418 May 19 01:17 workernode_map.json
[2026-05-19 02:50:49] drwx------ 5 boinc boinc      4096 May 19 01:17 pilot3
[2026-05-19 02:50:49] -rw------- 1 boinc boinc 191821682 May 19 02:49 HITS.50340623._001476.pool.root.1
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc       489 May 19 02:49 boinc_task_state.xml
[2026-05-19 02:50:49] -rw------- 1 boinc boinc        95 May 19 02:50 pilot_heartbeat.json
[2026-05-19 02:50:49] -rw------- 1 boinc boinc      1033 May 19 02:50 memory_monitor_summary.json
[2026-05-19 02:50:49] -rw------- 1 boinc boinc    253976 May 19 02:50 log.50340623._001476.job.log.tgz.1
[2026-05-19 02:50:49] -rw------- 1 boinc boinc      6337 May 19 02:50 heartbeat_new.json
[2026-05-19 02:50:49] -rw------- 1 boinc boinc      6228 May 19 02:50 heartbeat.json
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc      8192 May 19 02:50 boinc_mmap_file
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc        27 May 19 02:50 wrapper_checkpoint.txt
[2026-05-19 02:50:49] -rw------- 1 boinc boinc      4823 May 19 02:50 pilotlog.txt
[2026-05-19 02:50:49] -rw------- 1 boinc boinc    540096 May 19 02:50 log.50340623._001476.job.log.1
[2026-05-19 02:50:49] -rw------- 1 boinc boinc       357 May 19 02:50 output.list
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc       410 May 19 02:50 runtime_log
[2026-05-19 02:50:49] -rw------- 1 boinc boinc    808960 May 19 02:50 result.tar.gz
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc      8539 May 19 02:50 runtime_log.err
[2026-05-19 02:50:49] -rw------- 1 boinc boinc       661 May 19 02:50 51efa111726e.diag
[2026-05-19 02:50:49] -rw-r--r-- 1 boinc boinc     20965 May 19 02:50 stderr.txt
[2026-05-19 02:50:49] HITS file was successfully produced:
[2026-05-19 02:50:49] -rw------- 1 boinc boinc 191821682 May 19 02:49 shared/HITS.pool.root.1
[2026-05-19 02:50:49]  *** Contents of shared directory: ***
[2026-05-19 02:50:49] total 622976
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc 444564509 May 19 01:17 ATLAS.root_0
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc    697423 May 19 01:17 input.tar.gz
[2026-05-19 02:50:49] -rw-r--r-- 2 boinc boinc     15667 May 19 01:17 start_atlas.sh
[2026-05-19 02:50:49] -rw------- 1 boinc boinc 191821682 May 19 02:49 HITS.pool.root.1
[2026-05-19 02:50:49] -rw------- 1 boinc boinc    808960 May 19 02:50 result.tar.gz
02:50:51 (3587360): run_atlas exited; CPU time 15259.164818
02:50:51 (3587360): called boinc_finish(0)

</stderr_txt>
]]>

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