Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:02:47 (1963646): wrapper (7.7.26015): starting
23:02:47 (1963646): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 23:02:47] Arguments: --nthreads 8
[2026-05-17 23:02:47] Threads: 8
[2026-05-17 23:02:47] Checking for CVMFS
[2026-05-17 23:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 23:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 23:02:48] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 23:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 23:02:49] 2.13.3.0 8423 25196 176080 159623 1 308 33338472 39288832 6765 16776704 0 27204094 99.721 19134403 36625 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-17 23:02:49] CVMFS is ok
[2026-05-17 23:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-17 23:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-17 23:02:49] Further information can be found at the LHC@home message board.
[2026-05-17 23:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 23:02:49] Checking for apptainer binary...
[2026-05-17 23:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 23:02:49] Running /usr/bin/apptainer --version
[2026-05-17 23:02:49] apptainer version 1.4.5-3.el9
[2026-05-17 23:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 23:02:50] c-210-25.aglt2.org
[2026-05-17 23:02:50] apptainer works
[2026-05-17 23:02:50] Set ATHENA_PROC_NUMBER=8
[2026-05-17 23:02:50] Set ATHENA_CORE_NUMBER=8
[2026-05-17 23:02:50] Starting ATLAS job with PandaID=7142010033
[2026-05-17 23:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-18 06:47:28]  *** The last 200 lines of the pilot log: ***
[2026-05-18 06:47:28] 2026-05-18 10:46:41,035 | INFO     | stage-out finished correctly
[2026-05-18 06:47:28] 2026-05-18 10:46:41,374 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-18 06:47:28] 2026-05-18 10:46:42,172 | INFO     | monitor loop #1697: job 0:7142010033 is in state 'finished'
[2026-05-18 06:47:28] 2026-05-18 10:46:42,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,191 | INFO     | job 7142010033 has state=finished
[2026-05-18 06:47:28] 2026-05-18 10:46:44,192 | INFO     | preparing for final server update for job 7142010033 in state='finished'
[2026-05-18 06:47:28] 2026-05-18 10:46:44,192 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7142010033/jobReport.json
[2026-05-18 06:47:28] 2026-05-18 10:46:44,195 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-05-18 06:47:28] 2026-05-18 10:46:44,200 | INFO     | this job has now completed (state=finished)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,200 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,200 | INFO     | log transfer has been attempted: DONE
[2026-05-18 06:47:28] 2026-05-18 10:46:44,200 | INFO     | job 7142010033 has finished - writing final server update
[2026-05-18 06:47:28] 2026-05-18 10:46:44,201 | INFO     | total number of processed events: 400 (read)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,216 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7142010033/memory_monitor_summary.json (trf name=prmon)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,216 | INFO     | extracted standard info from prmon json
[2026-05-18 06:47:28] 2026-05-18 10:46:44,217 | INFO     | extracted standard memory fields from prmon json
[2026-05-18 06:47:28] 2026-05-18 10:46:44,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-18 06:47:28] 2026-05-18 10:46:44,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-18 06:47:28] 2026-05-18 10:46:44,234 | INFO     | fitting pss+swap vs Time
[2026-05-18 06:47:28] 2026-05-18 10:46:44,235 | INFO     | sum of square deviations: 29207603187.683468
[2026-05-18 06:47:28] 2026-05-18 10:46:44,248 | INFO     | sum of deviations: 183661072273.9868
[2026-05-18 06:47:28] 2026-05-18 10:46:44,249 | INFO     | mean x (centered): 0.0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,249 | INFO     | mean y: 2475967.498901099
[2026-05-18 06:47:28] 2026-05-18 10:46:44,249 | INFO     | intersect: 2475967.498901099
[2026-05-18 06:47:28] 2026-05-18 10:46:44,250 | INFO     | chi2: 4.239030522920962
[2026-05-18 06:47:28] 2026-05-18 10:46:44,251 | INFO     | sum of square deviations: 28255246754.231094
[2026-05-18 06:47:28] 2026-05-18 10:46:44,262 | INFO     | sum of deviations: 208965207233.3424
[2026-05-18 06:47:28] 2026-05-18 10:46:44,262 | INFO     | mean x (centered): 0.0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,262 | INFO     | mean y: 2479978.531111111
[2026-05-18 06:47:28] 2026-05-18 10:46:44,262 | INFO     | intersect: 2479978.531111111
[2026-05-18 06:47:28] 2026-05-18 10:46:44,263 | INFO     | chi2: 3.5611110877125665
[2026-05-18 06:47:28] 2026-05-18 10:46:44,263 | INFO     | current chi2=3.5611110877125665 (change=15.992322573352599 %)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,263 | INFO     | right removable region: 449
[2026-05-18 06:47:28] 2026-05-18 10:46:44,264 | INFO     | sum of square deviations: 28255087420.39101
[2026-05-18 06:47:28] 2026-05-18 10:46:44,279 | INFO     | sum of deviations: 53428098546.16443
[2026-05-18 06:47:28] 2026-05-18 10:46:44,279 | INFO     | mean x (centered): 0.0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,279 | INFO     | mean y: 2496794.237777778
[2026-05-18 06:47:28] 2026-05-18 10:46:44,279 | INFO     | intersect: 2496794.237777778
[2026-05-18 06:47:28] 2026-05-18 10:46:44,280 | INFO     | chi2: 1.1831472537689904
[2026-05-18 06:47:28] 2026-05-18 10:46:44,280 | INFO     | current chi2=1.1831472537689904 (change=72.08920182641839 %)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,281 | INFO     | sum of square deviations: 27323529484.97984
[2026-05-18 06:47:28] 2026-05-18 10:46:44,286 | INFO     | sum of deviations: 17094034603.35733
[2026-05-18 06:47:28] 2026-05-18 10:46:44,287 | INFO     | mean x (centered): 0.0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,287 | INFO     | mean y: 2502725.1191011234
[2026-05-18 06:47:28] 2026-05-18 10:46:44,287 | INFO     | intersect: 2502725.1191011234
[2026-05-18 06:47:28] 2026-05-18 10:46:44,288 | INFO     | chi2: 0.9077754966599162
[2026-05-18 06:47:28] 2026-05-18 10:46:44,288 | INFO     | current chi2=0.9077754966599162 (change=23.274512638377015 %)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,288 | INFO     | left removable region: 10
[2026-05-18 06:47:28] 2026-05-18 10:46:44,289 | INFO     | sum of square deviations: 26233143500.997726
[2026-05-18 06:47:28] 2026-05-18 10:46:44,294 | INFO     | sum of deviations: 43269764088.54898
[2026-05-18 06:47:28] 2026-05-18 10:46:44,294 | INFO     | mean x (centered): 0.0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,295 | INFO     | mean y: 2507064.548974943
[2026-05-18 06:47:28] 2026-05-18 10:46:44,295 | INFO     | intersect: 2507064.548974943
[2026-05-18 06:47:28] 2026-05-18 10:46:44,296 | INFO     | chi2: 0.2126005705847514
[2026-05-18 06:47:28] 2026-05-18 10:46:44,296 | INFO     | current memory leak: 1.65 B/s (using 439 data points, chi2=0.21)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,296 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | ..............................
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . Timing measurements:
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . get job = 0 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . initial setup = 17 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . payload setup = 36 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . stage-in = 0 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . payload execution = 27746 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,297 | INFO     | . stage-out = 3 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,298 | INFO     | . log creation = 0 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,298 | INFO     | ..............................
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | 
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | job summary report
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | --------------------------------------------------
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | PanDA job id: 7142010033
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | task id: 50087083
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | errors: (none)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | pilot state: finished 
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | transexitcode: 0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | exeerrorcode: 0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | exeerrordiag: 
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | exitcode: 0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | exitmsg: OK
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | cpuconsumptiontime: 43254 s
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | nevents: 400
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | neventsw: 0
[2026-05-18 06:47:28] 2026-05-18 10:46:44,405 | INFO     | pid: 1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | pgrp: 1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | corecount: 8
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | event service: False
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | sizes: {0: 2265661, 1: 2267546, 2: 2267546, 27787: 2304391, 27793: 2313445, 27796: 2313583}
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | --------------------------------------------------
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | 
[2026-05-18 06:47:28] 2026-05-18 10:46:44,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-18 06:47:28] 2026-05-18 10:46:44,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-18 06:47:28] 2026-05-18 10:46:44,588 | INFO     | job 7142010033 has completed (purged errors)
[2026-05-18 06:47:28] 2026-05-18 10:46:44,589 | INFO     | overall cleanup function is called
[2026-05-18 06:47:28] 2026-05-18 10:46:45,603 | INFO     | --- collectZombieJob: --- 10, [1972357]
[2026-05-18 06:47:28] 2026-05-18 10:46:45,604 | INFO     | zombie collector waiting for pid 1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:45,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-18 06:47:28] 2026-05-18 10:46:45,604 | INFO     | collected zombie processes
[2026-05-18 06:47:28] 2026-05-18 10:46:45,604 | INFO     | will attempt to kill all subprocesses of pid=1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:46,104 | INFO     | process IDs to be killed: [1972357] (in reverse order)
[2026-05-18 06:47:28] 2026-05-18 10:46:46,456 | WARNING  | found no corresponding commands to process id(s)
[2026-05-18 06:47:28] 2026-05-18 10:46:46,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-18 06:47:28] 2026-05-18 10:46:46,480 | INFO     | did not find any defunct processes belonging to 1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:46,488 | INFO     | did not find any defunct processes belonging to 1972357
[2026-05-18 06:47:28] 2026-05-18 10:46:46,488 | INFO     | Ready for new job
[2026-05-18 06:47:28] 2026-05-18 10:46:46,491 | INFO     | ***************************************
[2026-05-18 06:47:28] 2026-05-18 10:46:46,491 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-18 06:47:28] 2026-05-18 10:46:46,491 | INFO     | ***************************************
[2026-05-18 06:47:28] 2026-05-18 10:46:46,492 | INFO     | 
[2026-05-18 06:47:28] 2026-05-18 10:46:46,494 | INFO     | architecture information:
[2026-05-18 06:47:28] 2026-05-18 10:46:46,494 | INFO     | executing command: cat /etc/os-release
[2026-05-18 06:47:28] 2026-05-18 10:46:46,663 | INFO     | cat /etc/os-release:
[2026-05-18 06:47:28] NAME="CentOS Linux"
[2026-05-18 06:47:28] VERSION="7 (Core)"
[2026-05-18 06:47:28] ID="centos"
[2026-05-18 06:47:28] ID_LIKE="rhel fedora"
[2026-05-18 06:47:28] VERSION_ID="7"
[2026-05-18 06:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-18 06:47:28] ANSI_COLOR="0;31"
[2026-05-18 06:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-18 06:47:28] HOME_URL="https://www.centos.org/"
[2026-05-18 06:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-18 06:47:28] 
[2026-05-18 06:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-18 06:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-18 06:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-18 06:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-18 06:47:28] 
[2026-05-18 06:47:28] 2026-05-18 10:46:46,663 | INFO     | ***************************************
[2026-05-18 06:47:28] 2026-05-18 10:46:47,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-18 06:47:28] 2026-05-18 10:46:47,233 | INFO     | sufficient remaining disk space (48030023680 B)
[2026-05-18 06:47:28] 2026-05-18 10:46:47,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-18 06:47:28] 2026-05-18 10:46:47,234 | INFO     | current server update state: UPDATING_FINAL
[2026-05-18 06:47:28] 2026-05-18 10:46:47,234 | INFO     | update_server=False
[2026-05-18 06:47:28] 2026-05-18 10:46:47,234 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-18 06:47:28] 2026-05-18 10:46:47,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-18 06:47:28] 2026-05-18 10:46:47,579 | INFO     | all job control threads have been joined
[2026-05-18 06:47:28] 2026-05-18 10:46:47,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-18 06:47:28] 2026-05-18 10:46:48,038 | INFO     | all data control threads have been joined
[2026-05-18 06:47:28] 2026-05-18 10:46:48,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-18 06:47:28] 2026-05-18 10:46:48,213 | INFO     | aborting loop
[2026-05-18 06:47:28] 2026-05-18 10:46:48,240 | INFO     | [job] retrieve thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:48,338 | INFO     | [payload] validate_post thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:48,352 | INFO     | all payload control threads have been joined
[2026-05-18 06:47:28] 2026-05-18 10:46:48,371 | INFO     | [payload] execute_payloads thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:48,587 | INFO     | [job] control thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:48,689 | INFO     | [job] validate thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,044 | INFO     | [data] control thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,214 | INFO     | [data] copytool_in thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,226 | INFO     | [job] job monitor thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,243 | INFO     | [data] copytool_out thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,283 | INFO     | [payload] failed_post thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,358 | INFO     | [payload] control thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-18 06:47:28] 2026-05-18 10:46:49,612 | INFO     | [job] create_data_payload thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:49,686 | INFO     | [payload] validate_pre thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:50,434 | INFO     | [job] queue monitor thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:46:51,614 | INFO     | [data] queue_monitor thread has finished
[2026-05-18 06:47:28] 2026-05-18 10:47:18,329 | INFO     | PID=1967726 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-18 06:47:28] 2026-05-18 10:47:18,330 | INFO     | .. there are 7 such processes running
[2026-05-18 06:47:28] 2026-05-18 10:47:18,333 | INFO     | found 0 job(s) in 20 queues
[2026-05-18 06:47:28] 2026-05-18 10:47:18,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-18 06:47:28] 2026-05-18 10:47:18,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-18 06:47:28] 2026-05-18 10:47:21,022 | INFO     | [monitor] cgroup control has ended
[2026-05-18 06:47:28] 2026-05-18 10:47:21,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189689161536)>', '<ExcThread(monitor, started 140189317973760)>']
[2026-05-18 06:47:28] 2026-05-18 10:47:22,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-18 06:47:28] 2026-05-18 10:47:22,362 | INFO     | [monitor] control thread has ended
[2026-05-18 06:47:28] 2026-05-18 10:47:26,619 | INFO     | all workflow threads have been joined
[2026-05-18 06:47:28] 2026-05-18 10:47:26,620 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-18 06:47:28] 2026-05-18 10:47:26,622 | INFO     | traces error code: 0
[2026-05-18 06:47:28] 2026-05-18 10:47:26,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-18 06:47:28] 2026-05-18 10:47:27,109 [wrapper] ==== pilot stdout END ====
[2026-05-18 06:47:28] 2026-05-18 10:47:27,112 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-18 06:47:28] 2026-05-18 10:47:27,115 [wrapper] pilotpid: 1967726
[2026-05-18 06:47:28] 2026-05-18 10:47:27,117 [wrapper] Pilot exit status: 0
[2026-05-18 06:47:28] 2026-05-18 10:47:27,374 [wrapper] pandaids: 7142010033
[2026-05-18 06:47:28] 2026-05-18 10:47:28,048 [wrapper] cleanup supervisor_pilot 2658053 1967727
[2026-05-18 06:47:28] 2026-05-18 10:47:28,123 [wrapper] Test setup, not cleaning
[2026-05-18 06:47:28] 2026-05-18 10:47:28,157 [wrapper] apfmon messages muted
[2026-05-18 06:47:28] 2026-05-18 10:47:28,233 [wrapper] ==== wrapper stdout END ====
[2026-05-18 06:47:28] 2026-05-18 10:47:28,268 [wrapper] ==== wrapper stderr END ====
[2026-05-18 06:47:28]  *** Error codes and diagnostics ***
[2026-05-18 06:47:28]     "exeErrorCode": 0,
[2026-05-18 06:47:28]     "pilotErrorCode": 0,
[2026-05-18 06:47:28]  *** Listing of results directory ***
[2026-05-18 06:47:28] total 1138204
[2026-05-18 06:47:28] -rwx------. 1 boincer umatlas     36281 May 17 01:20 runpilot2-wrapper.sh
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas      5631 May 17 05:18 queuedata.json
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas    683926 May 17 05:50 pilot3.tar.gz
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas       100 May 17 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-18 06:47:28] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 23:02 run_atlas
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas       105 May 17 23:02 job.xml
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas 993233793 May 17 23:02 EVNT.46375503._000086.pool.root.1
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas     15667 May 17 23:02 start_atlas.sh
[2026-05-18 06:47:28] drwxrwx--x. 2 boincer umatlas      4096 May 17 23:02 shared
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas    697436 May 17 23:02 input.tar.gz
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas         0 May 17 23:02 boinc_lockfile
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas      2600 May 17 23:02 pandaJob.out
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas        57 May 17 23:02 setup.sh.local
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas    993473 May 17 23:03 agis_schedconf.cvmfs.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas       442 May 17 23:03 workernode_map.json
[2026-05-18 06:47:28] drwx------. 5 boincer umatlas      4096 May 17 23:03 pilot3
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas      6576 May 18 06:38 init_data.xml
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas       489 May 18 06:45 boinc_task_state.xml
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas 162523097 May 18 06:45 HITS.50087083._010871.pool.root.1
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas      1039 May 18 06:46 memory_monitor_summary.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas   1502367 May 18 06:46 agis_ddmendpoints.agis.ALL.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas    559496 May 18 06:46 log.50087083._010871.job.log.tgz.1
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas      6414 May 18 06:46 heartbeat_new.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas      6305 May 18 06:46 heartbeat.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas        95 May 18 06:47 pilot_heartbeat.json
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas      4822 May 18 06:47 pilotlog.txt
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas        28 May 18 06:47 wrapper_checkpoint.txt
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas      8192 May 18 06:47 boinc_mmap_file
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas   2259423 May 18 06:47 log.50087083._010871.job.log.1
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas       357 May 18 06:47 output.list
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas       410 May 18 06:47 runtime_log
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas   2836480 May 18 06:47 result.tar.gz
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas      8965 May 18 06:47 runtime_log.err
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas       656 May 18 06:47 5012d8d06a87.diag
[2026-05-18 06:47:28] -rw-r--r--. 1 boincer umatlas     21213 May 18 06:47 stderr.txt
[2026-05-18 06:47:28] HITS file was successfully produced:
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas 162523097 May 18 06:45 shared/HITS.pool.root.1
[2026-05-18 06:47:28]  *** Contents of shared directory: ***
[2026-05-18 06:47:28] total 1132152
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas 993233793 May 17 23:02 ATLAS.root_0
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas     15667 May 17 23:02 start_atlas.sh
[2026-05-18 06:47:28] -rw-r--r--. 2 boincer umatlas    697436 May 17 23:02 input.tar.gz
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas 162523097 May 18 06:45 HITS.pool.root.1
[2026-05-18 06:47:28] -rw-------. 1 boincer umatlas   2836480 May 18 06:47 result.tar.gz
06:47:30 (1963646): run_atlas exited; CPU time 43954.674215
06:47:30 (1963646): called boinc_finish(0)

</stderr_txt>
]]>

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