Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:03:23 (4021): wrapper (7.7.26015): starting
19:03:23 (4021): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 19:03:23] Arguments: --nthreads 8
[2026-05-17 19:03:23] Threads: 8
[2026-05-17 19:03:23] Checking for CVMFS
[2026-05-17 19:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 19:03:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 19:03:27] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 19:03:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 19:03:29] 2.11.2.0 8887 46097 127876 159612 2 54 24661280 25165825 96 130560 0 89424592 99.960 18646232 13826 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 19:03:29] CVMFS is ok
[2026-05-17 19:03:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 19:03:29] Checking for apptainer binary...
[2026-05-17 19:03:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 19:03:29] Running /usr/bin/apptainer --version
[2026-05-17 19:03:29] apptainer version 1.3.2-1.el7
[2026-05-17 19:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 19:03:54] cg-vwn308.simple-grid.lan
[2026-05-17 19:03:54] apptainer works
[2026-05-17 19:03:55] Set ATHENA_PROC_NUMBER=8
[2026-05-17 19:03:55] Set ATHENA_CORE_NUMBER=8
[2026-05-17 19:03:55] Starting ATLAS job with PandaID=7141982979
[2026-05-17 19:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 22:48:32]  *** The last 200 lines of the pilot log: ***
[2026-05-17 22:48:32] 2026-05-17 20:47:59,867 | INFO     | sum of square deviations: 2593916542.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,869 | INFO     | sum of deviations: 103201787136.00002
[2026-05-17 22:48:32] 2026-05-17 20:47:59,869 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,869 | INFO     | mean y: 2434351.3251231527
[2026-05-17 22:48:32] 2026-05-17 20:47:59,869 | INFO     | intersect: 2434351.3251231527
[2026-05-17 22:48:32] 2026-05-17 20:47:59,870 | INFO     | chi2: 9.612447694030218
[2026-05-17 22:48:32] 2026-05-17 20:47:59,870 | INFO     | current chi2=9.612447694030218 (change=6.378446315076889 %)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,870 | INFO     | right removable region: 202
[2026-05-17 22:48:32] 2026-05-17 20:47:59,870 | INFO     | sum of square deviations: 2593916542.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,872 | INFO     | sum of deviations: 16485971080.999992
[2026-05-17 22:48:32] 2026-05-17 20:47:59,872 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,872 | INFO     | mean y: 2483637.660098522
[2026-05-17 22:48:32] 2026-05-17 20:47:59,873 | INFO     | intersect: 2483637.660098522
[2026-05-17 22:48:32] 2026-05-17 20:47:59,873 | INFO     | chi2: 4.517477516467215
[2026-05-17 22:48:32] 2026-05-17 20:47:59,873 | INFO     | current chi2=4.517477516467215 (change=56.001501668401275 %)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,874 | INFO     | sum of square deviations: 2406926989.5
[2026-05-17 22:48:32] 2026-05-17 20:47:59,875 | INFO     | sum of deviations: -41393038949.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,875 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,875 | INFO     | mean y: 2530772.505050505
[2026-05-17 22:48:32] 2026-05-17 20:47:59,875 | INFO     | intersect: 2530772.505050505
[2026-05-17 22:48:32] 2026-05-17 20:47:59,876 | INFO     | chi2: 1.368208743598753
[2026-05-17 22:48:32] 2026-05-17 20:47:59,876 | INFO     | current chi2=1.368208743598753 (change=69.71299273518625 %)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,876 | INFO     | sum of square deviations: 2229146912.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,878 | INFO     | sum of deviations: -55897379279.999985
[2026-05-17 22:48:32] 2026-05-17 20:47:59,878 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,878 | INFO     | mean y: 2543075.829015544
[2026-05-17 22:48:32] 2026-05-17 20:47:59,879 | INFO     | intersect: 2543075.829015544
[2026-05-17 22:48:32] 2026-05-17 20:47:59,879 | INFO     | chi2: 0.9925317731016525
[2026-05-17 22:48:32] 2026-05-17 20:47:59,879 | INFO     | current chi2=0.9925317731016525 (change=27.457577087906206 %)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,879 | INFO     | sum of square deviations: 2060343747.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,881 | INFO     | sum of deviations: -54687110305.00001
[2026-05-17 22:48:32] 2026-05-17 20:47:59,881 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,882 | INFO     | mean y: 2541935.138297872
[2026-05-17 22:48:32] 2026-05-17 20:47:59,882 | INFO     | intersect: 2541935.138297872
[2026-05-17 22:48:32] 2026-05-17 20:47:59,882 | INFO     | chi2: 0.975695095711115
[2026-05-17 22:48:32] 2026-05-17 20:47:59,882 | INFO     | current chi2=0.975695095711115 (change=1.6963363639153892 %)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,882 | INFO     | left removable region: 20
[2026-05-17 22:48:32] 2026-05-17 20:47:59,883 | INFO     | sum of square deviations: 1869302025.5
[2026-05-17 22:48:32] 2026-05-17 20:47:59,884 | INFO     | sum of deviations: -40445192278.99999
[2026-05-17 22:48:32] 2026-05-17 20:47:59,885 | INFO     | mean x (centered): 0.0
[2026-05-17 22:48:32] 2026-05-17 20:47:59,885 | INFO     | mean y: 2555258.087912088
[2026-05-17 22:48:32] 2026-05-17 20:47:59,885 | INFO     | intersect: 2555258.087912088
[2026-05-17 22:48:32] 2026-05-17 20:47:59,886 | INFO     | chi2: 0.18004303806682517
[2026-05-17 22:48:32] 2026-05-17 20:47:59,886 | INFO     | current memory leak: -21.64 B/s (using 182 data points, chi2=0.18)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,886 | INFO     | could have reported an average CPU frequency of 2000 MHz (11 samples)
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | ..............................
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . Timing measurements:
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . get job = 0 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . initial setup = 127 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . payload setup = 235 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . stage-in = 0 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . payload execution = 12761 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,887 | INFO     | . stage-out = 1 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,888 | INFO     | . log creation = 0 s
[2026-05-17 22:48:32] 2026-05-17 20:47:59,888 | INFO     | ..............................
[2026-05-17 22:48:32] 2026-05-17 20:48:00,006 | INFO     | 
[2026-05-17 22:48:32] 2026-05-17 20:48:00,007 | INFO     | job summary report
[2026-05-17 22:48:32] 2026-05-17 20:48:00,007 | INFO     | --------------------------------------------------
[2026-05-17 22:48:32] 2026-05-17 20:48:00,007 | INFO     | PanDA job id: 7141982979
[2026-05-17 22:48:32] 2026-05-17 20:48:00,007 | INFO     | task id: 50087083
[2026-05-17 22:48:32] 2026-05-17 20:48:00,007 | INFO     | errors: (none)
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | pilot state: finished 
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | transexitcode: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | exeerrorcode: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | exeerrordiag: 
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | exitcode: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | exitmsg: OK
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | cpuconsumptiontime: 47879 s
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | nevents: 400
[2026-05-17 22:48:32] 2026-05-17 20:48:00,008 | INFO     | neventsw: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | pid: 12488
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | pgrp: 12488
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | corecount: 8
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | event service: False
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | sizes: {0: 2265056, 1: 2265968, 2: 2267570, 12: 2267570, 13002: 2297713, 13005: 2307033}
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | --------------------------------------------------
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | 
[2026-05-17 22:48:32] 2026-05-17 20:48:00,009 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-17 22:48:32] 2026-05-17 20:48:00,040 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | job 7141982979 has completed (purged errors)
[2026-05-17 22:48:32] 2026-05-17 20:48:00,043 | INFO     | overall cleanup function is called
[2026-05-17 22:48:32] 2026-05-17 20:48:01,052 | INFO     | --- collectZombieJob: --- 10, [12488]
[2026-05-17 22:48:32] 2026-05-17 20:48:01,053 | INFO     | zombie collector waiting for pid 12488
[2026-05-17 22:48:32] 2026-05-17 20:48:01,053 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 22:48:32] 2026-05-17 20:48:01,053 | INFO     | collected zombie processes
[2026-05-17 22:48:32] 2026-05-17 20:48:01,053 | INFO     | will attempt to kill all subprocesses of pid=12488
[2026-05-17 22:48:32] 2026-05-17 20:48:01,110 | INFO     | process IDs to be killed: [12488] (in reverse order)
[2026-05-17 22:48:32] 2026-05-17 20:48:01,162 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 22:48:32] 2026-05-17 20:48:01,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 22:48:32] 2026-05-17 20:48:01,164 | INFO     | did not find any defunct processes belonging to 12488
[2026-05-17 22:48:32] 2026-05-17 20:48:01,166 | INFO     | did not find any defunct processes belonging to 12488
[2026-05-17 22:48:32] 2026-05-17 20:48:01,166 | INFO     | Ready for new job
[2026-05-17 22:48:32] 2026-05-17 20:48:01,168 | INFO     | ***************************************
[2026-05-17 22:48:32] 2026-05-17 20:48:01,168 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 22:48:32] 2026-05-17 20:48:01,168 | INFO     | ***************************************
[2026-05-17 22:48:32] 2026-05-17 20:48:01,168 | INFO     | 
[2026-05-17 22:48:32] 2026-05-17 20:48:01,169 | INFO     | pilot is running in a VM
[2026-05-17 22:48:32] 2026-05-17 20:48:01,169 | INFO     | architecture information:
[2026-05-17 22:48:32] 2026-05-17 20:48:01,169 | INFO     | executing command: cat /etc/os-release
[2026-05-17 22:48:32] 2026-05-17 20:48:01,191 | INFO     | cat /etc/os-release:
[2026-05-17 22:48:32] NAME="CentOS Linux"
[2026-05-17 22:48:32] VERSION="7 (Core)"
[2026-05-17 22:48:32] ID="centos"
[2026-05-17 22:48:32] ID_LIKE="rhel fedora"
[2026-05-17 22:48:32] VERSION_ID="7"
[2026-05-17 22:48:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 22:48:32] ANSI_COLOR="0;31"
[2026-05-17 22:48:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 22:48:32] HOME_URL="https://www.centos.org/"
[2026-05-17 22:48:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 22:48:32] 
[2026-05-17 22:48:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 22:48:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 22:48:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 22:48:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 22:48:32] 
[2026-05-17 22:48:32] 2026-05-17 20:48:01,191 | INFO     | ***************************************
[2026-05-17 22:48:32] 2026-05-17 20:48:01,695 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-17 22:48:32] 2026-05-17 20:48:01,718 | INFO     | sufficient remaining disk space (496710451200 B)
[2026-05-17 22:48:32] 2026-05-17 20:48:01,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 22:48:32] 2026-05-17 20:48:01,719 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 22:48:32] 2026-05-17 20:48:01,719 | INFO     | update_server=False
[2026-05-17 22:48:32] 2026-05-17 20:48:01,719 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 22:48:32] 2026-05-17 20:48:01,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 22:48:32] 2026-05-17 20:48:01,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 22:48:32] 2026-05-17 20:48:02,064 | INFO     | all job control threads have been joined
[2026-05-17 22:48:32] 2026-05-17 20:48:02,136 | INFO     | all data control threads have been joined
[2026-05-17 22:48:32] 2026-05-17 20:48:02,725 | INFO     | [job] retrieve thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:02,725 | INFO     | [job] queue monitor thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:02,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 22:48:32] 2026-05-17 20:48:03,065 | INFO     | all payload control threads have been joined
[2026-05-17 22:48:32] 2026-05-17 20:48:03,070 | INFO     | [job] control thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:03,138 | INFO     | [data] control thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:03,146 | WARNING  | process 12488 can no longer be monitored (due to stat problems) - aborting
[2026-05-17 22:48:32] 2026-05-17 20:48:03,153 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:03,196 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 22:48:32] 2026-05-17 20:48:03,197 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 22:48:32] 2026-05-17 20:48:03,197 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-17 22:48:32] 2026-05-17 20:48:03,197 | WARNING  | maxPSS not found in memory monitor output
[2026-05-17 22:48:32] 2026-05-17 20:48:03,252 | INFO     | number of running child processes to parent process 12488: 1
[2026-05-17 22:48:32] 2026-05-17 20:48:03,253 | INFO     | maximum number of monitored processes: 8
[2026-05-17 22:48:32] 2026-05-17 20:48:03,253 | INFO     | aborting job monitoring since job object (job id=7141982979) has expired
[2026-05-17 22:48:32] 2026-05-17 20:48:03,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 22:48:32] 2026-05-17 20:48:03,253 | INFO     | will abort loop
[2026-05-17 22:48:32] 2026-05-17 20:48:03,762 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:03,763 | INFO     | [job] validate thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:03,817 | INFO     | [payload] failed_post thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,062 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,071 | INFO     | [payload] control thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,172 | INFO     | [data] copytool_in thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,259 | INFO     | [job] job monitor thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,322 | INFO     | [payload] validate_post thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:04,746 | INFO     | [data] copytool_out thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:05,726 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:12,491 | INFO     | job.realtimelogging is not enabled
[2026-05-17 22:48:32] 2026-05-17 20:48:13,496 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 22:48:32] 2026-05-17 20:48:24,512 | INFO     | [monitor] cgroup control has ended
[2026-05-17 22:48:32] 2026-05-17 20:48:25,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657193125696)>', '<ExcThread(monitor, started 140656529884928)>']
[2026-05-17 22:48:32] 2026-05-17 20:48:30,544 | INFO     | all workflow threads have been joined
[2026-05-17 22:48:32] 2026-05-17 20:48:30,544 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 22:48:32] 2026-05-17 20:48:30,545 | INFO     | traces error code: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:30,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 22:48:32] 2026-05-17 20:48:31,964 | INFO     | PID=8003 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-17 22:48:32] 2026-05-17 20:48:31,965 | INFO     | .. there are 2 such processes running
[2026-05-17 22:48:32] 2026-05-17 20:48:31,966 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 22:48:32] 2026-05-17 20:48:31,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 22:48:32] 2026-05-17 20:48:31,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 22:48:32] 2026-05-17 20:48:31,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 22:48:32] 2026-05-17 20:48:31,967 | CRITICAL | thread 'MainThread' is not alive
[2026-05-17 22:48:32] 2026-05-17 20:48:31,967 | INFO     | [monitor] control thread has ended
[2026-05-17 22:48:32] 2026-05-17 20:48:32,116 [wrapper] ==== pilot stdout END ====
[2026-05-17 22:48:32] 2026-05-17 20:48:32,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 22:48:32] 2026-05-17 20:48:32,130 [wrapper] pilotpid: 8003
[2026-05-17 22:48:32] 2026-05-17 20:48:32,135 [wrapper] Pilot exit status: 0
[2026-05-17 22:48:32] 2026-05-17 20:48:32,158 [wrapper] pandaids: 7141982979
[2026-05-17 22:48:32] 2026-05-17 20:48:32,200 [wrapper] cleanup supervisor_pilot 19013 8004
[2026-05-17 22:48:32] 2026-05-17 20:48:32,207 [wrapper] Test setup, not cleaning
[2026-05-17 22:48:32] 2026-05-17 20:48:32,213 [wrapper] apfmon messages muted
[2026-05-17 22:48:32] 2026-05-17 20:48:32,219 [wrapper] ==== wrapper stdout END ====
[2026-05-17 22:48:32] 2026-05-17 20:48:32,223 [wrapper] ==== wrapper stderr END ====
[2026-05-17 22:48:32]  *** Error codes and diagnostics ***
[2026-05-17 22:48:32]     "exeErrorCode": 0,
[2026-05-17 22:48:32]     "pilotErrorCode": 0,
[2026-05-17 22:48:32]  *** Listing of results directory ***
[2026-05-17 22:48:32] total 1138696
[2026-05-17 22:48:32] -rwx------. 1 boinc boinc     36281 May 17 07:22 runpilot2-wrapper.sh
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc      5631 May 17 11:18 queuedata.json
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc    683926 May 17 12:50 pilot3.tar.gz
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc       100 May 17 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 22:48:32] -rwxr-xr-x. 1 boinc boinc      7986 May 17 19:03 run_atlas
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc       105 May 17 19:03 job.xml
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc      6305 May 17 19:03 init_data.xml
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc 996052079 May 17 19:03 EVNT.46375503._000075.pool.root.1
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc     15667 May 17 19:03 start_atlas.sh
[2026-05-17 22:48:32] drwxrwx--x. 2 boinc boinc        68 May 17 19:03 shared
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc    697434 May 17 19:03 input.tar.gz
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc         0 May 17 19:03 boinc_lockfile
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc      2598 May 17 19:03 pandaJob.out
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc       413 May 17 19:10 workernode_map.json
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc    993481 May 17 19:11 agis_schedconf.cvmfs.json
[2026-05-17 22:48:32] drwx------. 5 boinc boinc      4096 May 17 19:11 pilot3
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc 162522285 May 17 22:47 HITS.50087083._009491.pool.root.1
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc       490 May 17 22:47 boinc_task_state.xml
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc      1020 May 17 22:47 memory_monitor_summary.json
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc   1502367 May 17 22:47 agis_ddmendpoints.agis.ALL.json
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc    460389 May 17 22:47 log.50087083._009491.job.log.tgz.1
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc      6350 May 17 22:47 heartbeat_new.json
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc      6241 May 17 22:47 heartbeat.json
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc      8192 May 17 22:48 boinc_mmap_file
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc        28 May 17 22:48 wrapper_checkpoint.txt
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc        95 May 17 22:48 pilot_heartbeat.json
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc       889 May 17 22:48 pilotlog.txt
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc   1216483 May 17 22:48 log.50087083._009491.job.log.1
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc       357 May 17 22:48 output.list
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc       410 May 17 22:48 runtime_log
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc   1689600 May 17 22:48 result.tar.gz
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc      8439 May 17 22:48 runtime_log.err
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc       656 May 17 22:48 5087d04530e2.diag
[2026-05-17 22:48:32] -rw-r--r--. 1 boinc boinc     20717 May 17 22:48 stderr.txt
[2026-05-17 22:48:32] HITS file was successfully produced:
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc 162522285 May 17 22:47 shared/HITS.pool.root.1
[2026-05-17 22:48:32]  *** Contents of shared directory: ***
[2026-05-17 22:48:32] total 1133776
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc 996052079 May 17 19:03 ATLAS.root_0
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc     15667 May 17 19:03 start_atlas.sh
[2026-05-17 22:48:32] -rw-r--r--. 2 boinc boinc    697434 May 17 19:03 input.tar.gz
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc 162522285 May 17 22:47 HITS.pool.root.1
[2026-05-17 22:48:32] -rw-------. 1 boinc boinc   1689600 May 17 22:48 result.tar.gz
22:48:33 (4021): run_atlas exited; CPU time 48002.441284
22:48:33 (4021): called boinc_finish(0)

</stderr_txt>
]]>

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