Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:58:32 (1351455): wrapper (7.7.26015): starting
04:58:32 (1351455): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 04:58:32] Arguments: --nthreads 8
[2026-05-17 04:58:32] Threads: 8
[2026-05-17 04:58:32] Checking for CVMFS
[2026-05-17 04:58:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 04:58:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 04:58:33] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 04:58:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 04:58:33] 2.13.3.0 5864 22493 179204 159600 2 794 39630850 40960000 19208 16776704 0 141778706 99.709 115627538 41699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-17 04:58:33] CVMFS is ok
[2026-05-17 04:58:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-17 04:58:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-17 04:58:33] Further information can be found at the LHC@home message board.
[2026-05-17 04:58:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 04:58:33] Checking for apptainer binary...
[2026-05-17 04:58:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 04:58:33] Running /usr/bin/apptainer --version
[2026-05-17 04:58:33] apptainer version 1.4.5-3.el9
[2026-05-17 04:58:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 04:58:34] c-212-16.aglt2.org
[2026-05-17 04:58:34] apptainer works
[2026-05-17 04:58:34] Set ATHENA_PROC_NUMBER=8
[2026-05-17 04:58:34] Set ATHENA_CORE_NUMBER=8
[2026-05-17 04:58:34] Starting ATLAS job with PandaID=7138718759
[2026-05-17 04:58:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 06:51:51]  *** The last 200 lines of the pilot log: ***
[2026-05-17 06:51:51] 2026-05-17 10:51:01,972 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-17 06:51:51] 2026-05-17 10:51:02,850 | INFO     | PID=1355765 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-17 06:51:51] 2026-05-17 10:51:02,850 | INFO     | .. there are 24 such processes running
[2026-05-17 06:51:51] 2026-05-17 10:51:03,126 | INFO     | job 7138718759 has state=finished
[2026-05-17 06:51:51] 2026-05-17 10:51:03,126 | INFO     | preparing for final server update for job 7138718759 in state='finished'
[2026-05-17 06:51:51] 2026-05-17 10:51:03,374 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,375 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7138718759/jobReport.json
[2026-05-17 06:51:51] 2026-05-17 10:51:03,377 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-05-17 06:51:51] 2026-05-17 10:51:03,377 | INFO     | this job has now completed (state=finished)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,377 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,378 | INFO     | log transfer has been attempted: DONE
[2026-05-17 06:51:51] 2026-05-17 10:51:03,378 | INFO     | job 7138718759 has finished - writing final server update
[2026-05-17 06:51:51] 2026-05-17 10:51:03,378 | INFO     | total number of processed events: 400 (read)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,404 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7138718759/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,404 | INFO     | extracted standard info from prmon json
[2026-05-17 06:51:51] 2026-05-17 10:51:03,404 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 06:51:51] 2026-05-17 10:51:03,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 06:51:51] 2026-05-17 10:51:03,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 06:51:51] 2026-05-17 10:51:03,429 | INFO     | fitting pss+swap vs Time
[2026-05-17 06:51:51] 2026-05-17 10:51:03,429 | INFO     | sum of square deviations: 401535798.7706426
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | sum of deviations: 9410327685.623848
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | mean x (centered): 0.0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | mean y: 2440244.2752293576
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | intersect: 2440244.2752293576
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | chi2: 2.847420098350244
[2026-05-17 06:51:51] 2026-05-17 10:51:03,430 | INFO     | sum of square deviations: 348773543.75961506
[2026-05-17 06:51:51] 2026-05-17 10:51:03,447 | INFO     | sum of deviations: 15564958769.951923
[2026-05-17 06:51:51] 2026-05-17 10:51:03,447 | INFO     | mean x (centered): 0.0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,447 | INFO     | mean y: 2457311.5096153845
[2026-05-17 06:51:51] 2026-05-17 10:51:03,447 | INFO     | intersect: 2457311.5096153845
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | chi2: 2.1918968068244284
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | current chi2=2.1918968068244284 (change=23.021657110084202 %)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | right removable region: 103
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | sum of square deviations: 348770493.75961506
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | sum of deviations: -11840339179.163462
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | mean x (centered): 0.0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,448 | INFO     | mean y: 2500651.9326923075
[2026-05-17 06:51:51] 2026-05-17 10:51:03,449 | INFO     | intersect: 2500651.9326923075
[2026-05-17 06:51:51] 2026-05-17 10:51:03,449 | INFO     | chi2: 0.7437388808583189
[2026-05-17 06:51:51] 2026-05-17 10:51:03,449 | INFO     | current chi2=0.7437388808583189 (change=73.88025457538807 %)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,449 | INFO     | sum of square deviations: 300848953.8383835
[2026-05-17 06:51:51] 2026-05-17 10:51:03,449 | INFO     | sum of deviations: -10736819462.404043
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | mean x (centered): 0.0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | mean y: 2497021.101010101
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | intersect: 2497021.101010101
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | chi2: 0.7362118891480892
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | current chi2=0.7362118891480892 (change=1.0120476290742042 %)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | left removable region: 10
[2026-05-17 06:51:51] 2026-05-17 10:51:03,450 | INFO     | sum of square deviations: 249396429.82795686
[2026-05-17 06:51:51] 2026-05-17 10:51:03,451 | INFO     | sum of deviations: -4213178692.23656
[2026-05-17 06:51:51] 2026-05-17 10:51:03,451 | INFO     | mean x (centered): 0.0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,451 | INFO     | mean y: 2519123.559139785
[2026-05-17 06:51:51] 2026-05-17 10:51:03,451 | INFO     | intersect: 2519123.559139785
[2026-05-17 06:51:51] 2026-05-17 10:51:03,457 | INFO     | chi2: 0.028674421992677848
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | current memory leak: -16.89 B/s (using 93 data points, chi2=0.03)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | could have reported an average CPU frequency of 3178 MHz (7 samples)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | ..............................
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | . Timing measurements:
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | . get job = 0 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | . initial setup = 26 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | . payload setup = 55 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,458 | INFO     | . stage-in = 0 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,459 | INFO     | . payload execution = 6614 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,459 | INFO     | . stage-out = 2 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,459 | INFO     | . log creation = 0 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,459 | INFO     | ..............................
[2026-05-17 06:51:51] 2026-05-17 10:51:03,678 | INFO     | 
[2026-05-17 06:51:51] 2026-05-17 10:51:03,679 | INFO     | job summary report
[2026-05-17 06:51:51] 2026-05-17 10:51:03,679 | INFO     | --------------------------------------------------
[2026-05-17 06:51:51] 2026-05-17 10:51:03,679 | INFO     | PanDA job id: 7138718759
[2026-05-17 06:51:51] 2026-05-17 10:51:03,679 | INFO     | task id: 50087078
[2026-05-17 06:51:51] 2026-05-17 10:51:03,679 | INFO     | errors: (none)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | pilot state: finished 
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | transexitcode: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | exeerrorcode: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | exeerrordiag: 
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | exitcode: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | exitmsg: OK
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | cpuconsumptiontime: 28636 s
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | nevents: 400
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | neventsw: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | pid: 1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | pgrp: 1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | corecount: 8
[2026-05-17 06:51:51] 2026-05-17 10:51:03,680 | INFO     | event service: False
[2026-05-17 06:51:51] 2026-05-17 10:51:03,681 | INFO     | sizes: {0: 2265676, 1: 2267505, 12: 2267505, 6673: 2294651, 6674: 2294650, 6676: 2303704, 6677: 2303888, 6678: 2304082}
[2026-05-17 06:51:51] 2026-05-17 10:51:03,681 | INFO     | --------------------------------------------------
[2026-05-17 06:51:51] 2026-05-17 10:51:03,681 | INFO     | 
[2026-05-17 06:51:51] 2026-05-17 10:51:03,681 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-05-17 06:51:51] 2026-05-17 10:51:03,904 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 06:51:51] 2026-05-17 10:51:03,906 | INFO     | job 7138718759 has completed (purged errors)
[2026-05-17 06:51:51] 2026-05-17 10:51:03,907 | INFO     | overall cleanup function is called
[2026-05-17 06:51:51] 2026-05-17 10:51:04,999 | INFO     | --- collectZombieJob: --- 10, [1362494]
[2026-05-17 06:51:51] 2026-05-17 10:51:04,999 | INFO     | zombie collector waiting for pid 1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:04,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 06:51:51] 2026-05-17 10:51:04,999 | INFO     | collected zombie processes
[2026-05-17 06:51:51] 2026-05-17 10:51:04,999 | INFO     | will attempt to kill all subprocesses of pid=1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:05,718 | INFO     | process IDs to be killed: [1362494] (in reverse order)
[2026-05-17 06:51:51] 2026-05-17 10:51:05,837 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 06:51:51] 2026-05-17 10:51:05,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 06:51:51] 2026-05-17 10:51:05,856 | INFO     | did not find any defunct processes belonging to 1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:05,872 | INFO     | did not find any defunct processes belonging to 1362494
[2026-05-17 06:51:51] 2026-05-17 10:51:05,872 | INFO     | Ready for new job
[2026-05-17 06:51:51] 2026-05-17 10:51:05,901 | INFO     | ***************************************
[2026-05-17 06:51:51] 2026-05-17 10:51:05,902 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 06:51:51] 2026-05-17 10:51:05,902 | INFO     | ***************************************
[2026-05-17 06:51:51] 2026-05-17 10:51:05,902 | INFO     | 
[2026-05-17 06:51:51] 2026-05-17 10:51:05,962 | INFO     | architecture information:
[2026-05-17 06:51:51] 2026-05-17 10:51:06,003 | INFO     | executing command: cat /etc/os-release
[2026-05-17 06:51:51] 2026-05-17 10:51:06,137 | INFO     | cat /etc/os-release:
[2026-05-17 06:51:51] NAME="CentOS Linux"
[2026-05-17 06:51:51] VERSION="7 (Core)"
[2026-05-17 06:51:51] ID="centos"
[2026-05-17 06:51:51] ID_LIKE="rhel fedora"
[2026-05-17 06:51:51] VERSION_ID="7"
[2026-05-17 06:51:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 06:51:51] ANSI_COLOR="0;31"
[2026-05-17 06:51:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 06:51:51] HOME_URL="https://www.centos.org/"
[2026-05-17 06:51:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 06:51:51] 
[2026-05-17 06:51:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 06:51:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 06:51:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 06:51:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 06:51:51] 
[2026-05-17 06:51:51] 2026-05-17 10:51:06,138 | INFO     | ***************************************
[2026-05-17 06:51:51] 2026-05-17 10:51:06,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-05-17 06:51:51] 2026-05-17 10:51:06,721 | INFO     | sufficient remaining disk space (122621526016 B)
[2026-05-17 06:51:51] 2026-05-17 10:51:06,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 06:51:51] 2026-05-17 10:51:06,722 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 06:51:51] 2026-05-17 10:51:06,722 | INFO     | update_server=False
[2026-05-17 06:51:51] 2026-05-17 10:51:06,722 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 06:51:51] 2026-05-17 10:51:07,266 | INFO     | all data control threads have been joined
[2026-05-17 06:51:51] 2026-05-17 10:51:07,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 06:51:51] 2026-05-17 10:51:07,466 | INFO     | aborting loop
[2026-05-17 06:51:51] 2026-05-17 10:51:07,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 06:51:51] 2026-05-17 10:51:07,708 | INFO     | all job control threads have been joined
[2026-05-17 06:51:51] 2026-05-17 10:51:07,728 | INFO     | [job] retrieve thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:07,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:07,862 | INFO     | all payload control threads have been joined
[2026-05-17 06:51:51] 2026-05-17 10:51:08,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 06:51:51] 2026-05-17 10:51:08,195 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,275 | INFO     | [data] control thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,472 | INFO     | [job] job monitor thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,700 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 06:51:51] 2026-05-17 10:51:08,704 | INFO     | [payload] validate_post thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,704 | INFO     | [payload] failed_post thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,721 | INFO     | [job] control thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,896 | INFO     | [payload] control thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,965 | INFO     | [job] validate thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:09,002 | INFO     | [data] copytool_in thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:08,998 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:09,603 | INFO     | [data] copytool_out thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:09,710 | INFO     | [job] queue monitor thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:12,216 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 06:51:51] 2026-05-17 10:51:38,234 | INFO     | PID=1355765 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-17 06:51:51] 2026-05-17 10:51:38,235 | INFO     | .. there are 24 such processes running
[2026-05-17 06:51:51] 2026-05-17 10:51:38,235 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 06:51:51] 2026-05-17 10:51:38,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 06:51:51] 2026-05-17 10:51:38,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 06:51:51] 2026-05-17 10:51:44,470 | INFO     | [monitor] cgroup control has ended
[2026-05-17 06:51:51] 2026-05-17 10:51:45,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295083026240)>', '<ExcThread(monitor, started 140294553065216)>']
[2026-05-17 06:51:51] 2026-05-17 10:51:45,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 06:51:51] 2026-05-17 10:51:45,302 | INFO     | [monitor] control thread has ended
[2026-05-17 06:51:51] 2026-05-17 10:51:50,255 | INFO     | all workflow threads have been joined
[2026-05-17 06:51:51] 2026-05-17 10:51:50,255 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 06:51:51] 2026-05-17 10:51:50,255 | INFO     | traces error code: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:50,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 06:51:51] 2026-05-17 10:51:50,966 [wrapper] ==== pilot stdout END ====
[2026-05-17 06:51:51] 2026-05-17 10:51:50,969 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 06:51:51] 2026-05-17 10:51:50,971 [wrapper] pilotpid: 1355765
[2026-05-17 06:51:51] 2026-05-17 10:51:50,991 [wrapper] Pilot exit status: 0
[2026-05-17 06:51:51] 2026-05-17 10:51:51,053 [wrapper] pandaids: 7138718759
[2026-05-17 06:51:51] 2026-05-17 10:51:51,170 [wrapper] cleanup supervisor_pilot 1685540 1355766
[2026-05-17 06:51:51] 2026-05-17 10:51:51,173 [wrapper] Test setup, not cleaning
[2026-05-17 06:51:51] 2026-05-17 10:51:51,185 [wrapper] apfmon messages muted
[2026-05-17 06:51:51] 2026-05-17 10:51:51,200 [wrapper] ==== wrapper stdout END ====
[2026-05-17 06:51:51] 2026-05-17 10:51:51,215 [wrapper] ==== wrapper stderr END ====
[2026-05-17 06:51:51]  *** Error codes and diagnostics ***
[2026-05-17 06:51:51]     "exeErrorCode": 0,
[2026-05-17 06:51:51]     "pilotErrorCode": 0,
[2026-05-17 06:51:51]  *** Listing of results directory ***
[2026-05-17 06:51:51] total 611732
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas    683926 May 16 14:10 pilot3.tar.gz
[2026-05-17 06:51:51] -rwx------. 1 boincer umatlas     36281 May 16 14:28 runpilot2-wrapper.sh
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas      5631 May 16 14:59 queuedata.json
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas       100 May 17 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 06:51:51] -rwxr-xr-x. 1 boincer umatlas      7986 May 17 04:58 run_atlas
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas       105 May 17 04:58 job.xml
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas 441708674 May 17 04:58 EVNT.46701437._000901.pool.root.1
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas     15667 May 17 04:58 start_atlas.sh
[2026-05-17 06:51:51] drwxrwx--x. 2 boincer umatlas      4096 May 17 04:58 shared
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas    697425 May 17 04:58 input.tar.gz
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas         0 May 17 04:58 boinc_lockfile
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas      2567 May 17 04:58 pandaJob.out
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas        57 May 17 04:58 setup.sh.local
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas    993489 May 17 04:59 agis_schedconf.cvmfs.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas   1502367 May 17 04:59 agis_ddmendpoints.agis.ALL.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas       430 May 17 04:59 workernode_map.json
[2026-05-17 06:51:51] drwx------. 5 boincer umatlas      4096 May 17 04:59 pilot3
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas      6873 May 17 06:46 init_data.xml
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas 178703142 May 17 06:50 HITS.50087078._012542.pool.root.1
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas       489 May 17 06:50 boinc_task_state.xml
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas        95 May 17 06:50 pilot_heartbeat.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas      1048 May 17 06:50 memory_monitor_summary.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas    353060 May 17 06:51 log.50087078._012542.job.log.tgz.1
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas      6356 May 17 06:51 heartbeat_new.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas      6247 May 17 06:51 heartbeat.json
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas      4824 May 17 06:51 pilotlog.txt
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas        27 May 17 06:51 wrapper_checkpoint.txt
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas    585141 May 17 06:51 log.50087078._012542.job.log.1
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas       357 May 17 06:51 output.list
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas       410 May 17 06:51 runtime_log
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas    952320 May 17 06:51 result.tar.gz
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas      8964 May 17 06:51 runtime_log.err
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas       652 May 17 06:51 b72ff63a4e54.diag
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas      8192 May 17 06:51 boinc_mmap_file
[2026-05-17 06:51:51] -rw-r--r--. 1 boincer umatlas     21352 May 17 06:51 stderr.txt
[2026-05-17 06:51:51] HITS file was successfully produced:
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas 178703142 May 17 06:50 shared/HITS.pool.root.1
[2026-05-17 06:51:51]  *** Contents of shared directory: ***
[2026-05-17 06:51:51] total 607516
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas 441708674 May 17 04:58 ATLAS.root_0
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas     15667 May 17 04:58 start_atlas.sh
[2026-05-17 06:51:51] -rw-r--r--. 2 boincer umatlas    697425 May 17 04:58 input.tar.gz
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas 178703142 May 17 06:50 HITS.pool.root.1
[2026-05-17 06:51:51] -rw-------. 1 boincer umatlas    952320 May 17 06:51 result.tar.gz
06:51:52 (1351455): run_atlas exited; CPU time 28789.369432
06:51:52 (1351455): called boinc_finish(0)

</stderr_txt>
]]>

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