Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:08:23 (18245): wrapper (7.7.26015): starting
12:08:23 (18245): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 12:08:23] Arguments: --nthreads 8
[2026-05-17 12:08:23] Threads: 8
[2026-05-17 12:08:23] Checking for CVMFS
[2026-05-17 12:08:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 12:08:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 12:08:25] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 12:08:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 12:08:27] 2.11.2.0 21570 45698 102712 159603 3 60 22255947 25165824 540 130560 0 25469501 99.923 5999273 7562 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 12:08:27] CVMFS is ok
[2026-05-17 12:08:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 12:08:27] Checking for apptainer binary...
[2026-05-17 12:08:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 12:08:27] Running /usr/bin/apptainer --version
[2026-05-17 12:08:27] apptainer version 1.3.2-1.el7
[2026-05-17 12:08:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 12:08:39] cg-vwn322.simple-grid.lan
[2026-05-17 12:08:39] apptainer works
[2026-05-17 12:08:39] Set ATHENA_PROC_NUMBER=8
[2026-05-17 12:08:39] Set ATHENA_CORE_NUMBER=8
[2026-05-17 12:08:40] Starting ATLAS job with PandaID=7141650422
[2026-05-17 12:08:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 14:22:07]  *** The last 200 lines of the pilot log: ***
[2026-05-17 14:22:07] 2026-05-17 12:21:25,835 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7141650422/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,836 | INFO     | extracted standard info from prmon json
[2026-05-17 14:22:07] 2026-05-17 12:21:25,836 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 14:22:07] 2026-05-17 12:21:25,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 14:22:07] 2026-05-17 12:21:25,836 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 14:22:07] 2026-05-17 12:21:25,839 | INFO     | fitting pss+swap vs Time
[2026-05-17 14:22:07] 2026-05-17 12:21:25,839 | INFO     | sum of square deviations: 563026370.5
[2026-05-17 14:22:07] 2026-05-17 12:21:25,841 | INFO     | sum of deviations: -11815661478.499977
[2026-05-17 14:22:07] 2026-05-17 12:21:25,841 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,841 | INFO     | mean y: 2548702.7786885244
[2026-05-17 14:22:07] 2026-05-17 12:21:25,841 | INFO     | intersect: 2548702.7786885244
[2026-05-17 14:22:07] 2026-05-17 12:21:25,842 | INFO     | chi2: 2.54184452162084
[2026-05-17 14:22:07] 2026-05-17 12:21:25,842 | INFO     | sum of square deviations: 496597218.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,843 | INFO     | sum of deviations: -2387448133.9999924
[2026-05-17 14:22:07] 2026-05-17 12:21:25,843 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,843 | INFO     | mean y: 2569739.5726495725
[2026-05-17 14:22:07] 2026-05-17 12:21:25,843 | INFO     | intersect: 2569739.5726495725
[2026-05-17 14:22:07] 2026-05-17 12:21:25,844 | INFO     | chi2: 1.781194722428433
[2026-05-17 14:22:07] 2026-05-17 12:21:25,844 | INFO     | current chi2=1.781194722428433 (change=29.925111182936114 %)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,844 | INFO     | sum of square deviations: 435610028.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,845 | INFO     | sum of deviations: -1160270538.5
[2026-05-17 14:22:07] 2026-05-17 12:21:25,845 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,845 | INFO     | mean y: 2572810.276785714
[2026-05-17 14:22:07] 2026-05-17 12:21:25,845 | INFO     | intersect: 2572810.276785714
[2026-05-17 14:22:07] 2026-05-17 12:21:25,845 | INFO     | chi2: 1.7841224132675466
[2026-05-17 14:22:07] 2026-05-17 12:21:25,846 | INFO     | current chi2=1.7841224132675466 (change=-0.16436669176304652 %)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,846 | INFO     | right removable region: 111
[2026-05-17 14:22:07] 2026-05-17 12:21:25,846 | INFO     | sum of square deviations: 496597218.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,847 | INFO     | sum of deviations: -31427763273.999992
[2026-05-17 14:22:07] 2026-05-17 12:21:25,847 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,847 | INFO     | mean y: 2592932.3333333335
[2026-05-17 14:22:07] 2026-05-17 12:21:25,847 | INFO     | intersect: 2592932.3333333335
[2026-05-17 14:22:07] 2026-05-17 12:21:25,847 | INFO     | chi2: 0.9575123004614499
[2026-05-17 14:22:07] 2026-05-17 12:21:25,848 | INFO     | current chi2=0.9575123004614499 (change=62.33002088377617 %)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,848 | INFO     | sum of square deviations: 435610028.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | sum of deviations: -32679735265.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | mean y: 2595939.7678571427
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | intersect: 2595939.7678571427
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | chi2: 0.8990828029878324
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | current chi2=0.8990828029878324 (change=6.102218994519318 %)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,849 | INFO     | left removable region: 10
[2026-05-17 14:22:07] 2026-05-17 12:21:25,850 | INFO     | sum of square deviations: 319447850.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,850 | INFO     | sum of deviations: -20840951950.000004
[2026-05-17 14:22:07] 2026-05-17 12:21:25,851 | INFO     | mean x (centered): 0.0
[2026-05-17 14:22:07] 2026-05-17 12:21:25,851 | INFO     | mean y: 2628293.495049505
[2026-05-17 14:22:07] 2026-05-17 12:21:25,851 | INFO     | intersect: 2628293.495049505
[2026-05-17 14:22:07] 2026-05-17 12:21:25,851 | INFO     | chi2: 0.0916078649178939
[2026-05-17 14:22:07] 2026-05-17 12:21:25,851 | INFO     | current memory leak: -65.24 B/s (using 101 data points, chi2=0.09)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | ..............................
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | . Timing measurements:
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | . get job = 0 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | . initial setup = 118 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,852 | INFO     | . payload setup = 122 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,853 | INFO     | . stage-in = 0 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,853 | INFO     | . payload execution = 7395 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,853 | INFO     | . stage-out = 0 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,853 | INFO     | . log creation = 0 s
[2026-05-17 14:22:07] 2026-05-17 12:21:25,853 | INFO     | ..............................
[2026-05-17 14:22:07] 2026-05-17 12:21:26,319 | INFO     | 
[2026-05-17 14:22:07] 2026-05-17 12:21:26,319 | INFO     | job summary report
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | --------------------------------------------------
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | PanDA job id: 7141650422
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | task id: 50087078
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | errors: (none)
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | pilot state: finished 
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | transexitcode: 0
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | exeerrorcode: 0
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | exeerrordiag: 
[2026-05-17 14:22:07] 2026-05-17 12:21:26,320 | INFO     | exitcode: 0
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | exitmsg: OK
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | cpuconsumptiontime: 50106 s
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | nevents: 400
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | neventsw: 0
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | pid: 26822
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | pgrp: 26822
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | corecount: 8
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | event service: False
[2026-05-17 14:22:07] 2026-05-17 12:21:26,321 | INFO     | sizes: {0: 2265020, 1: 2265705, 2: 2235755, 3: 2267534, 13: 2267562, 7521: 2295036, 7522: 2295163, 7523: 2304273, 7525: 2304411}
[2026-05-17 14:22:07] 2026-05-17 12:21:26,322 | INFO     | --------------------------------------------------
[2026-05-17 14:22:07] 2026-05-17 12:21:26,322 | INFO     | 
[2026-05-17 14:22:07] 2026-05-17 12:21:26,322 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-17 14:22:07] 2026-05-17 12:21:26,365 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,365 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 14:22:07] 2026-05-17 12:21:26,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 14:22:07] 2026-05-17 12:21:26,368 | INFO     | job 7141650422 has completed (purged errors)
[2026-05-17 14:22:07] 2026-05-17 12:21:26,368 | INFO     | overall cleanup function is called
[2026-05-17 14:22:07] 2026-05-17 12:21:27,338 | WARNING  | process 26822 can no longer be monitored (due to stat problems) - aborting
[2026-05-17 14:22:07] 2026-05-17 12:21:27,380 | INFO     | --- collectZombieJob: --- 10, [26822]
[2026-05-17 14:22:07] 2026-05-17 12:21:27,380 | INFO     | zombie collector waiting for pid 26822
[2026-05-17 14:22:07] 2026-05-17 12:21:27,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 14:22:07] 2026-05-17 12:21:27,380 | INFO     | collected zombie processes
[2026-05-17 14:22:07] 2026-05-17 12:21:27,380 | INFO     | will attempt to kill all subprocesses of pid=26822
[2026-05-17 14:22:07] 2026-05-17 12:21:27,426 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 14:22:07] 2026-05-17 12:21:27,526 | INFO     | process IDs to be killed: [26822] (in reverse order)
[2026-05-17 14:22:07] 2026-05-17 12:21:27,557 | INFO     | number of running child processes to parent process 26822: 1
[2026-05-17 14:22:07] 2026-05-17 12:21:27,558 | INFO     | maximum number of monitored processes: 6
[2026-05-17 14:22:07] 2026-05-17 12:21:27,558 | INFO     | aborting job monitoring since job object (job id=7141650422) has expired
[2026-05-17 14:22:07] 2026-05-17 12:21:27,575 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 14:22:07] 2026-05-17 12:21:27,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 14:22:07] 2026-05-17 12:21:27,578 | INFO     | did not find any defunct processes belonging to 26822
[2026-05-17 14:22:07] 2026-05-17 12:21:27,580 | INFO     | did not find any defunct processes belonging to 26822
[2026-05-17 14:22:07] 2026-05-17 12:21:27,580 | INFO     | Ready for new job
[2026-05-17 14:22:07] 2026-05-17 12:21:27,582 | INFO     | ***************************************
[2026-05-17 14:22:07] 2026-05-17 12:21:27,582 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 14:22:07] 2026-05-17 12:21:27,582 | INFO     | ***************************************
[2026-05-17 14:22:07] 2026-05-17 12:21:27,582 | INFO     | 
[2026-05-17 14:22:07] 2026-05-17 12:21:27,583 | INFO     | pilot is running in a VM
[2026-05-17 14:22:07] 2026-05-17 12:21:27,583 | INFO     | architecture information:
[2026-05-17 14:22:07] 2026-05-17 12:21:27,583 | INFO     | executing command: cat /etc/os-release
[2026-05-17 14:22:07] 2026-05-17 12:21:27,602 | INFO     | cat /etc/os-release:
[2026-05-17 14:22:07] NAME="CentOS Linux"
[2026-05-17 14:22:07] VERSION="7 (Core)"
[2026-05-17 14:22:07] ID="centos"
[2026-05-17 14:22:07] ID_LIKE="rhel fedora"
[2026-05-17 14:22:07] VERSION_ID="7"
[2026-05-17 14:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 14:22:07] ANSI_COLOR="0;31"
[2026-05-17 14:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 14:22:07] HOME_URL="https://www.centos.org/"
[2026-05-17 14:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 14:22:07] 
[2026-05-17 14:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 14:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 14:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 14:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 14:22:07] 
[2026-05-17 14:22:07] 2026-05-17 12:21:27,602 | INFO     | ***************************************
[2026-05-17 14:22:07] 2026-05-17 12:21:28,105 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-17 14:22:07] 2026-05-17 12:21:28,130 | INFO     | sufficient remaining disk space (496648585216 B)
[2026-05-17 14:22:07] 2026-05-17 12:21:28,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 14:22:07] 2026-05-17 12:21:28,131 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 14:22:07] 2026-05-17 12:21:28,131 | INFO     | update_server=False
[2026-05-17 14:22:07] 2026-05-17 12:21:28,131 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 14:22:07] 2026-05-17 12:21:28,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 14:22:07] 2026-05-17 12:21:28,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 14:22:07] 2026-05-17 12:21:28,133 | INFO     | will abort loop
[2026-05-17 14:22:07] 2026-05-17 12:21:28,486 | INFO     | all job control threads have been joined
[2026-05-17 14:22:07] 2026-05-17 12:21:28,585 | INFO     | all payload control threads have been joined
[2026-05-17 14:22:07] 2026-05-17 12:21:28,963 | INFO     | all data control threads have been joined
[2026-05-17 14:22:07] 2026-05-17 12:21:29,136 | INFO     | [job] retrieve thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,138 | INFO     | [payload] validate_post thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,138 | INFO     | [job] job monitor thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,348 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,451 | INFO     | [job] validate thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,491 | INFO     | [job] control thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,590 | INFO     | [payload] control thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,698 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,767 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,936 | INFO     | [payload] failed_post thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:29,969 | INFO     | [data] control thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:30,137 | INFO     | [data] copytool_out thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:30,251 | INFO     | [data] copytool_in thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:30,343 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:30,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 14:22:07] 2026-05-17 12:21:30,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 14:22:07] 2026-05-17 12:21:31,978 | INFO     | [job] queue monitor thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:34,548 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 14:22:07] 2026-05-17 12:21:58,131 | INFO     | PID=22343 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-17 14:22:07] 2026-05-17 12:21:58,131 | INFO     | .. there are 2 such processes running
[2026-05-17 14:22:07] 2026-05-17 12:21:58,133 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 14:22:07] 2026-05-17 12:21:58,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 14:22:07] 2026-05-17 12:21:58,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 14:22:07] 2026-05-17 12:21:59,812 | INFO     | [monitor] cgroup control has ended
[2026-05-17 14:22:07] 2026-05-17 12:22:01,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036430890816)>', '<ExcThread(monitor, started 140036214839040)>']
[2026-05-17 14:22:07] 2026-05-17 12:22:02,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 14:22:07] 2026-05-17 12:22:02,153 | INFO     | [monitor] control thread has ended
[2026-05-17 14:22:07] 2026-05-17 12:22:06,761 | INFO     | all workflow threads have been joined
[2026-05-17 14:22:07] 2026-05-17 12:22:06,762 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 14:22:07] 2026-05-17 12:22:06,762 | INFO     | traces error code: 0
[2026-05-17 14:22:07] 2026-05-17 12:22:06,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 14:22:07] 2026-05-17 12:22:06,910 [wrapper] ==== pilot stdout END ====
[2026-05-17 14:22:07] 2026-05-17 12:22:06,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 14:22:07] 2026-05-17 12:22:06,923 [wrapper] pilotpid: 22343
[2026-05-17 14:22:07] 2026-05-17 12:22:06,929 [wrapper] Pilot exit status: 0
[2026-05-17 14:22:07] 2026-05-17 12:22:06,948 [wrapper] pandaids: 7141650422
[2026-05-17 14:22:07] 2026-05-17 12:22:06,979 [wrapper] cleanup supervisor_pilot  1855 22344
[2026-05-17 14:22:07] 2026-05-17 12:22:06,983 [wrapper] Test setup, not cleaning
[2026-05-17 14:22:07] 2026-05-17 12:22:06,996 [wrapper] apfmon messages muted
[2026-05-17 14:22:07] 2026-05-17 12:22:07,002 [wrapper] ==== wrapper stdout END ====
[2026-05-17 14:22:07] 2026-05-17 12:22:07,009 [wrapper] ==== wrapper stderr END ====
[2026-05-17 14:22:07]  *** Error codes and diagnostics ***
[2026-05-17 14:22:07]     "exeErrorCode": 0,
[2026-05-17 14:22:07]     "pilotErrorCode": 0,
[2026-05-17 14:22:07]  *** Listing of results directory ***
[2026-05-17 14:22:07] total 613616
[2026-05-17 14:22:07] -rwx------. 1 boinc boinc     36281 May 17 01:08 runpilot2-wrapper.sh
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc    683926 May 17 04:09 pilot3.tar.gz
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc      5631 May 17 05:42 queuedata.json
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc       100 May 17 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 14:22:07] -rwxr-xr-x. 1 boinc boinc      7986 May 17 12:08 run_atlas
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc       105 May 17 12:08 job.xml
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc 439870590 May 17 12:08 EVNT.46701437._000962.pool.root.1
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc      6304 May 17 12:08 init_data.xml
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc     15667 May 17 12:08 start_atlas.sh
[2026-05-17 14:22:07] drwxrwx--x. 2 boinc boinc        68 May 17 12:08 shared
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc    697432 May 17 12:08 input.tar.gz
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc         0 May 17 12:08 boinc_lockfile
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc      2568 May 17 12:08 pandaJob.out
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc   1502367 May 17 12:13 agis_ddmendpoints.agis.ALL.json
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc       415 May 17 12:15 workernode_map.json
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc    993489 May 17 12:15 agis_schedconf.cvmfs.json
[2026-05-17 14:22:07] drwx------. 5 boinc boinc      4096 May 17 12:15 pilot3
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc       488 May 17 14:20 boinc_task_state.xml
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc 182207851 May 17 14:20 HITS.50087078._015865.pool.root.1
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc      1023 May 17 14:21 memory_monitor_summary.json
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc    349367 May 17 14:21 log.50087078._015865.job.log.tgz.1
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc      6340 May 17 14:21 heartbeat_new.json
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc      6231 May 17 14:21 heartbeat.json
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc        27 May 17 14:21 wrapper_checkpoint.txt
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc      8192 May 17 14:21 boinc_mmap_file
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc        95 May 17 14:21 pilot_heartbeat.json
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc      4885 May 17 14:22 pilotlog.txt
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc    728019 May 17 14:22 log.50087078._015865.job.log.1
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc       357 May 17 14:22 output.list
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc       410 May 17 14:22 runtime_log
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc   1095680 May 17 14:22 result.tar.gz
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc      8438 May 17 14:22 runtime_log.err
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc       651 May 17 14:22 f8f047e7d3a6.diag
[2026-05-17 14:22:07] -rw-r--r--. 1 boinc boinc     20721 May 17 14:22 stderr.txt
[2026-05-17 14:22:07] HITS file was successfully produced:
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc 182207851 May 17 14:20 shared/HITS.pool.root.1
[2026-05-17 14:22:07]  *** Contents of shared directory: ***
[2026-05-17 14:22:07] total 609276
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc 439870590 May 17 12:08 ATLAS.root_0
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc     15667 May 17 12:08 start_atlas.sh
[2026-05-17 14:22:07] -rw-r--r--. 2 boinc boinc    697432 May 17 12:08 input.tar.gz
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc 182207851 May 17 14:20 HITS.pool.root.1
[2026-05-17 14:22:07] -rw-------. 1 boinc boinc   1095680 May 17 14:22 result.tar.gz
14:22:08 (18245): run_atlas exited; CPU time 50172.522855
14:22:08 (18245): called boinc_finish(0)

</stderr_txt>
]]>

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