Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:56:46 (5082): wrapper (7.7.26015): starting
10:56:46 (5082): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 10:56:46] Arguments: --nthreads 8
[2026-05-17 10:56:46] Threads: 8
[2026-05-17 10:56:46] Checking for CVMFS
[2026-05-17 10:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 10:56:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 10:56:50] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 10:56:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 10:56:52] 2.11.2.0 8887 45610 126452 159600 3 54 24603885 25165825 96 130560 0 89286880 99.959 18629328 13933 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 10:56:52] CVMFS is ok
[2026-05-17 10:56:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 10:56:52] Checking for apptainer binary...
[2026-05-17 10:56:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 10:56:52] Running /usr/bin/apptainer --version
[2026-05-17 10:56:52] apptainer version 1.3.2-1.el7
[2026-05-17 10:56:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 10:57:18] cg-vwn308.simple-grid.lan
[2026-05-17 10:57:18] apptainer works
[2026-05-17 10:57:18] Set ATHENA_PROC_NUMBER=8
[2026-05-17 10:57:18] Set ATHENA_CORE_NUMBER=8
[2026-05-17 10:57:18] Starting ATLAS job with PandaID=7139272698
[2026-05-17 10:57:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 15:09:27]  *** The last 200 lines of the pilot log: ***
[2026-05-17 15:09:27] 2026-05-17 13:08:48,660 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 15:09:27] 2026-05-17 13:08:48,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 15:09:27] 2026-05-17 13:08:48,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 15:09:27] 2026-05-17 13:08:48,665 | INFO     | fitting pss+swap vs Time
[2026-05-17 15:09:27] 2026-05-17 13:08:48,666 | INFO     | sum of square deviations: 3871990738.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,668 | INFO     | sum of deviations: 144404834691.99994
[2026-05-17 15:09:27] 2026-05-17 13:08:48,668 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,668 | INFO     | mean y: 2401872.422413793
[2026-05-17 15:09:27] 2026-05-17 13:08:48,668 | INFO     | intersect: 2401872.422413793
[2026-05-17 15:09:27] 2026-05-17 13:08:48,669 | INFO     | chi2: 11.99254394018666
[2026-05-17 15:09:27] 2026-05-17 13:08:48,669 | INFO     | sum of square deviations: 3627000098.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,671 | INFO     | sum of deviations: 156324933507.99994
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | mean y: 2409125.625550661
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | intersect: 2409125.625550661
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | chi2: 11.346335290372686
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | current chi2=11.346335290372686 (change=5.388420113672034 %)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,672 | INFO     | right removable region: 226
[2026-05-17 15:09:27] 2026-05-17 13:08:48,673 | INFO     | sum of square deviations: 3627000098.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,678 | INFO     | sum of deviations: 61057408320.00001
[2026-05-17 15:09:27] 2026-05-17 13:08:48,678 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,678 | INFO     | mean y: 2453748.207048458
[2026-05-17 15:09:27] 2026-05-17 13:08:48,678 | INFO     | intersect: 2453748.207048458
[2026-05-17 15:09:27] 2026-05-17 13:08:48,679 | INFO     | chi2: 6.08442405901731
[2026-05-17 15:09:27] 2026-05-17 13:08:48,679 | INFO     | current chi2=6.08442405901731 (change=49.264942539600916 %)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,679 | INFO     | sum of square deviations: 3392567795.5
[2026-05-17 15:09:27] 2026-05-17 13:08:48,681 | INFO     | sum of deviations: -9366767038.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,682 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,682 | INFO     | mean y: 2499549.3693693695
[2026-05-17 15:09:27] 2026-05-17 13:08:48,682 | INFO     | intersect: 2499549.3693693695
[2026-05-17 15:09:27] 2026-05-17 13:08:48,682 | INFO     | chi2: 2.2623277633992194
[2026-05-17 15:09:27] 2026-05-17 13:08:48,682 | INFO     | current chi2=2.2623277633992194 (change=62.81771715029662 %)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,683 | INFO     | sum of square deviations: 3168461268.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,685 | INFO     | sum of deviations: -47213937475.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,685 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,685 | INFO     | mean y: 2525153.115207373
[2026-05-17 15:09:27] 2026-05-17 13:08:48,685 | INFO     | intersect: 2525153.115207373
[2026-05-17 15:09:27] 2026-05-17 13:08:48,686 | INFO     | chi2: 0.9509244270710726
[2026-05-17 15:09:27] 2026-05-17 13:08:48,686 | INFO     | current chi2=0.9509244270710726 (change=57.96699123551052 %)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,686 | INFO     | sum of square deviations: 2954447953.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,688 | INFO     | sum of deviations: -48914254677.5
[2026-05-17 15:09:27] 2026-05-17 13:08:48,688 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,688 | INFO     | mean y: 2526328.1556603773
[2026-05-17 15:09:27] 2026-05-17 13:08:48,689 | INFO     | intersect: 2526328.1556603773
[2026-05-17 15:09:27] 2026-05-17 13:08:48,689 | INFO     | chi2: 0.9244819442578966
[2026-05-17 15:09:27] 2026-05-17 13:08:48,689 | INFO     | current chi2=0.9244819442578966 (change=2.780713383777619 %)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,689 | INFO     | left removable region: 20
[2026-05-17 15:09:27] 2026-05-17 13:08:48,690 | INFO     | sum of square deviations: 2710627567.5
[2026-05-17 15:09:27] 2026-05-17 13:08:48,692 | INFO     | sum of deviations: -33817916300.499996
[2026-05-17 15:09:27] 2026-05-17 13:08:48,692 | INFO     | mean x (centered): 0.0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,692 | INFO     | mean y: 2537408.995145631
[2026-05-17 15:09:27] 2026-05-17 13:08:48,692 | INFO     | intersect: 2537408.995145631
[2026-05-17 15:09:27] 2026-05-17 13:08:48,692 | INFO     | chi2: 0.13267013443740577
[2026-05-17 15:09:27] 2026-05-17 13:08:48,693 | INFO     | current memory leak: -12.48 B/s (using 206 data points, chi2=0.13)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,693 | INFO     | could have reported an average CPU frequency of 2000 MHz (12 samples)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,693 | INFO     | ..............................
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . Timing measurements:
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . get job = 0 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . initial setup = 120 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . payload setup = 419 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . stage-in = 0 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . payload execution = 14252 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . stage-out = 3 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | . log creation = 1 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,694 | INFO     | ..............................
[2026-05-17 15:09:27] 2026-05-17 13:08:48,813 | INFO     | 
[2026-05-17 15:09:27] 2026-05-17 13:08:48,813 | INFO     | job summary report
[2026-05-17 15:09:27] 2026-05-17 13:08:48,813 | INFO     | --------------------------------------------------
[2026-05-17 15:09:27] 2026-05-17 13:08:48,813 | INFO     | PanDA job id: 7139272698
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | task id: 50087078
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | errors: (none)
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | pilot state: finished 
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | transexitcode: 0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | exeerrorcode: 0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | exeerrordiag: 
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | exitcode: 0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,814 | INFO     | exitmsg: OK
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | cpuconsumptiontime: 52350 s
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | nevents: 400
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | neventsw: 0
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | pid: 13588
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | pgrp: 13588
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | corecount: 8
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | event service: False
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | sizes: {0: 2265675, 1: 2246964, 2: 2267504, 12: 2267532, 14676: 2298384, 14680: 2307382, 14682: 2307566, 14685: 2307760}
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | --------------------------------------------------
[2026-05-17 15:09:27] 2026-05-17 13:08:48,815 | INFO     | 
[2026-05-17 15:09:27] 2026-05-17 13:08:48,816 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-17 15:09:27] 2026-05-17 13:08:49,345 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 15:09:27] 2026-05-17 13:08:49,348 | INFO     | job 7139272698 has completed (purged errors)
[2026-05-17 15:09:27] 2026-05-17 13:08:49,348 | INFO     | overall cleanup function is called
[2026-05-17 15:09:27] 2026-05-17 13:08:50,356 | INFO     | --- collectZombieJob: --- 10, [13588]
[2026-05-17 15:09:27] 2026-05-17 13:08:50,357 | INFO     | zombie collector waiting for pid 13588
[2026-05-17 15:09:27] 2026-05-17 13:08:50,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 15:09:27] 2026-05-17 13:08:50,357 | INFO     | collected zombie processes
[2026-05-17 15:09:27] 2026-05-17 13:08:50,357 | INFO     | will attempt to kill all subprocesses of pid=13588
[2026-05-17 15:09:27] 2026-05-17 13:08:50,423 | INFO     | process IDs to be killed: [13588] (in reverse order)
[2026-05-17 15:09:27] 2026-05-17 13:08:51,246 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 15:09:27] 2026-05-17 13:08:51,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 15:09:27] 2026-05-17 13:08:51,253 | INFO     | did not find any defunct processes belonging to 13588
[2026-05-17 15:09:27] 2026-05-17 13:08:51,255 | INFO     | did not find any defunct processes belonging to 13588
[2026-05-17 15:09:27] 2026-05-17 13:08:51,255 | INFO     | Ready for new job
[2026-05-17 15:09:27] 2026-05-17 13:08:51,257 | INFO     | ***************************************
[2026-05-17 15:09:27] 2026-05-17 13:08:51,257 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 15:09:27] 2026-05-17 13:08:51,257 | INFO     | ***************************************
[2026-05-17 15:09:27] 2026-05-17 13:08:51,257 | INFO     | 
[2026-05-17 15:09:27] 2026-05-17 13:08:51,258 | INFO     | pilot is running in a VM
[2026-05-17 15:09:27] 2026-05-17 13:08:51,258 | INFO     | architecture information:
[2026-05-17 15:09:27] 2026-05-17 13:08:51,269 | INFO     | executing command: cat /etc/os-release
[2026-05-17 15:09:27] 2026-05-17 13:08:51,697 | INFO     | cat /etc/os-release:
[2026-05-17 15:09:27] NAME="CentOS Linux"
[2026-05-17 15:09:27] VERSION="7 (Core)"
[2026-05-17 15:09:27] ID="centos"
[2026-05-17 15:09:27] ID_LIKE="rhel fedora"
[2026-05-17 15:09:27] VERSION_ID="7"
[2026-05-17 15:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 15:09:27] ANSI_COLOR="0;31"
[2026-05-17 15:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 15:09:27] HOME_URL="https://www.centos.org/"
[2026-05-17 15:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 15:09:27] 
[2026-05-17 15:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 15:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 15:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 15:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 15:09:27] 
[2026-05-17 15:09:27] 2026-05-17 13:08:51,697 | INFO     | ***************************************
[2026-05-17 15:09:27] 2026-05-17 13:08:52,201 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-17 15:09:27] 2026-05-17 13:08:52,447 | INFO     | sufficient remaining disk space (495188967424 B)
[2026-05-17 15:09:27] 2026-05-17 13:08:52,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 15:09:27] 2026-05-17 13:08:52,448 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 15:09:27] 2026-05-17 13:08:52,448 | INFO     | update_server=False
[2026-05-17 15:09:27] 2026-05-17 13:08:52,448 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 15:09:27] 2026-05-17 13:08:52,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 15:09:27] 2026-05-17 13:08:52,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 15:09:27] 2026-05-17 13:08:52,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 15:09:27] 2026-05-17 13:08:52,595 | INFO     | aborting loop
[2026-05-17 15:09:27] 2026-05-17 13:08:52,775 | INFO     | all data control threads have been joined
[2026-05-17 15:09:27] 2026-05-17 13:08:53,454 | INFO     | [job] retrieve thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,467 | INFO     | all payload control threads have been joined
[2026-05-17 15:09:27] 2026-05-17 13:08:53,601 | INFO     | [job] job monitor thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,782 | INFO     | [data] control thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,802 | INFO     | [payload] failed_post thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 15:09:27] 2026-05-17 13:08:53,863 | INFO     | [payload] validate_post thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,901 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:53,967 | INFO     | [job] validate thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,033 | INFO     | all job control threads have been joined
[2026-05-17 15:09:27] 2026-05-17 13:08:54,301 | INFO     | [data] copytool_in thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,418 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,440 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,456 | INFO     | [data] copytool_out thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,473 | INFO     | [payload] control thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:54,833 | INFO     | [job] queue monitor thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:55,040 | INFO     | [job] control thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:08:56,518 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 15:09:27] 2026-05-17 13:09:16,061 | INFO     | [monitor] cgroup control has ended
[2026-05-17 15:09:27] 2026-05-17 13:09:16,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639462156096)>', '<ExcThread(monitor, started 140638427277056)>']
[2026-05-17 15:09:27] 2026-05-17 13:09:21,544 | INFO     | PID=9113 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | INFO     | .. there are 2 such processes running
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 15:09:27] 2026-05-17 13:09:21,545 | INFO     | [monitor] control thread has ended
[2026-05-17 15:09:27] 2026-05-17 13:09:21,792 | INFO     | all workflow threads have been joined
[2026-05-17 15:09:27] 2026-05-17 13:09:21,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 15:09:27] 2026-05-17 13:09:21,793 | INFO     | traces error code: 0
[2026-05-17 15:09:27] 2026-05-17 13:09:21,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 15:09:27] 2026-05-17 13:09:22,185 [wrapper] ==== pilot stdout END ====
[2026-05-17 15:09:27] 2026-05-17 13:09:22,276 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 15:09:27] 2026-05-17 13:09:22,302 [wrapper] pilotpid: 9113
[2026-05-17 15:09:27] 2026-05-17 13:09:22,390 [wrapper] Pilot exit status: 0
[2026-05-17 15:09:27] 2026-05-17 13:09:22,876 [wrapper] pandaids: 7139272698
[2026-05-17 15:09:27] 2026-05-17 13:09:23,827 [wrapper] cleanup supervisor_pilot 20766 9114
[2026-05-17 15:09:27] 2026-05-17 13:09:23,924 [wrapper] Test setup, not cleaning
[2026-05-17 15:09:27] 2026-05-17 13:09:24,035 [wrapper] apfmon messages muted
[2026-05-17 15:09:27] 2026-05-17 13:09:24,149 [wrapper] ==== wrapper stdout END ====
[2026-05-17 15:09:27] 2026-05-17 13:09:24,242 [wrapper] ==== wrapper stderr END ====
[2026-05-17 15:09:27]  *** Error codes and diagnostics ***
[2026-05-17 15:09:27]     "exeErrorCode": 0,
[2026-05-17 15:09:27]     "pilotErrorCode": 0,
[2026-05-17 15:09:27]  *** Listing of results directory ***
[2026-05-17 15:09:27] total 617064
[2026-05-17 15:09:27] -rwx------. 1 boinc boinc     36281 May 17 01:04 runpilot2-wrapper.sh
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc    683926 May 17 04:09 pilot3.tar.gz
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc      5631 May 17 05:42 queuedata.json
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc       100 May 17 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 15:09:27] -rwxr-xr-x. 1 boinc boinc      7986 May 17 10:56 run_atlas
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc       105 May 17 10:56 job.xml
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc 437508420 May 17 10:56 EVNT.46701437._000935.pool.root.1
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc      6304 May 17 10:56 init_data.xml
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc     15667 May 17 10:56 start_atlas.sh
[2026-05-17 15:09:27] drwxrwx--x. 2 boinc boinc        68 May 17 10:56 shared
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc    697427 May 17 10:56 input.tar.gz
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc         0 May 17 10:56 boinc_lockfile
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc      2567 May 17 10:57 pandaJob.out
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc       413 May 17 11:03 workernode_map.json
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc    993489 May 17 11:03 agis_schedconf.cvmfs.json
[2026-05-17 15:09:27] drwx------. 5 boinc boinc      4096 May 17 11:03 pilot3
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc 186715798 May 17 15:07 HITS.50087078._014264.pool.root.1
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc       490 May 17 15:07 boinc_task_state.xml
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc      1012 May 17 15:08 memory_monitor_summary.json
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc   1502367 May 17 15:08 agis_ddmendpoints.agis.ALL.json
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc    409615 May 17 15:08 log.50087078._014264.job.log.tgz.1
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc      6344 May 17 15:08 heartbeat_new.json
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc      6235 May 17 15:08 heartbeat.json
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc        95 May 17 15:08 pilot_heartbeat.json
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc        28 May 17 15:09 wrapper_checkpoint.txt
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc      8192 May 17 15:09 boinc_mmap_file
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc      4882 May 17 15:09 pilotlog.txt
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc   1363404 May 17 15:09 log.50087078._014264.job.log.1
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc       357 May 17 15:09 output.list
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc       410 May 17 15:09 runtime_log
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc   1792000 May 17 15:09 result.tar.gz
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc      8439 May 17 15:09 runtime_log.err
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc       656 May 17 15:09 f7fd5691765d.diag
[2026-05-17 15:09:27] -rw-r--r--. 1 boinc boinc     20408 May 17 15:09 stderr.txt
[2026-05-17 15:09:27] HITS file was successfully produced:
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc 186715798 May 17 15:07 shared/HITS.pool.root.1
[2026-05-17 15:09:27]  *** Contents of shared directory: ***
[2026-05-17 15:09:27] total 612048
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc 437508420 May 17 10:56 ATLAS.root_0
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc     15667 May 17 10:56 start_atlas.sh
[2026-05-17 15:09:27] -rw-r--r--. 2 boinc boinc    697427 May 17 10:56 input.tar.gz
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc 186715798 May 17 15:07 HITS.pool.root.1
[2026-05-17 15:09:27] -rw-------. 1 boinc boinc   1792000 May 17 15:09 result.tar.gz
15:09:29 (5082): run_atlas exited; CPU time 52493.504220
15:09:29 (5082): called boinc_finish(0)

</stderr_txt>
]]>

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