Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-17 12:19:48 (70596): vboxwrapper version 26210
2026-05-17 12:19:48 (70596): BOINC client version: 8.2.11
2026-05-17 12:19:49 (70596): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-17 12:19:49 (70596): Detected: Sandbox Configuration Enabled
2026-05-17 12:19:49 (70596): Successfully copied 'init_data.xml' to the shared directory.
2026-05-17 12:19:49 (70596): Create VM. (boinc_9a0f953d02fe5aa4, slot#1)
2026-05-17 12:19:49 (70596): Setting Memory Size for VM. (4200MB)
2026-05-17 12:19:49 (70596): Setting CPU Count for VM. (2)
2026-05-17 12:19:49 (70596): Setting Chipset Options for VM.
2026-05-17 12:19:49 (70596): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-17 12:19:49 (70596): Setting Boot Options for VM.
2026-05-17 12:19:49 (70596): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-17 12:19:49 (70596): Enabling VM Network Access.
2026-05-17 12:19:49 (70596): Disabling USB Support for VM.
2026-05-17 12:19:49 (70596): Disabling COM Port Support for VM.
2026-05-17 12:19:49 (70596): Disabling Audio Support for VM.
2026-05-17 12:19:49 (70596): Disabling Clipboard Support for VM.
2026-05-17 12:19:49 (70596): Disabling Drag and Drop Support for VM.
2026-05-17 12:19:49 (70596): Adding storage controller(s) to VM.
2026-05-17 12:19:49 (70596): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-17 12:19:50 (70596): Adding VirtualBox Guest Additions to VM.
2026-05-17 12:19:50 (70596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-17 12:19:50 (70596): forwarding host port 49870 to guest port 80
2026-05-17 12:19:50 (70596): Enabling remote desktop for VM.
2026-05-17 12:19:50 (70596): Required extension pack not installed, remote desktop not enabled.
2026-05-17 12:19:50 (70596): Enabling shared directory for VM.
2026-05-17 12:19:50 (70596): Starting VM using VBoxManage interface. (boinc_9a0f953d02fe5aa4, slot#1)
2026-05-17 12:19:53 (70596): Successfully started VM. (PID = '70669')
2026-05-17 12:19:53 (70596): Reporting VM Process ID to BOINC.
2026-05-17 12:19:53 (70596): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-17 12:19:53 (70596): Guest Log: CPUID EDX: 0x178bfbff
2026-05-17 12:19:53 (70596): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-17 12:19:53 (70596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-17 12:19:53 (70596): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-17 12:19:53 (70596): Detected: Web Application Enabled (http://localhost:49870)
2026-05-17 12:19:53 (70596): Preference change detected
2026-05-17 12:19:53 (70596): Setting CPU throttle for VM. (50%)
2026-05-17 12:19:53 (70596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-17 12:19:55 (70596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-17 12:19:55 (70596): Guest Log: BIOS: Booting from Hard Disk...
2026-05-17 12:20:00 (70596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-17 12:20:00 (70596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-17 12:20:00 (70596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-17 12:20:06 (70596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-17 12:20:06 (70596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-17 12:20:17 (70596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000133 main     Log opened 2026-05-17T11:20:16.126069000Z
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000229 main     OS Product: Linux
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000272 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000311 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000350 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000351 main     Process ID: 1268
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.000352 main     Package type: LINUX_64BITS_GENERIC
2026-05-17 12:20:17 (70596): Guest Log: 00:00:00.001731 main     5.2.32 r132073 started. Verbose level = 0
2026-05-17 12:20:17 (70596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-17 12:20:17 (70596): Guest Log: [INFO] Mounting shared directory
2026-05-17 12:20:18 (70596): Guest Log: [INFO] Checking for init_data.xml
2026-05-17 12:20:28 (70596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-17 12:20:28 (70596): Guest Log: [INFO] Detected branch: prod
2026-05-17 12:20:28 (70596): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-17 12:20:28 (70596): Guest Log: Copying input files
2026-05-17 12:20:33 (70596): Guest Log: Copied input files into RunAtlas.
2026-05-17 12:20:33 (70596): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-17 12:20:33 (70596): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-17 12:20:33 (70596): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-17 12:20:33 (70596): Guest Log: Further information can be found at the LHC@home message board.
2026-05-17 12:20:41 (70596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-17 12:20:41 (70596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-17 12:20:41 (70596): Guest Log: 2.6.3.0 1542 0 32188 159605 4 1 3117651 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-17 12:20:42 (70596): Guest Log: copied the webapp to /var/www
2026-05-17 12:20:42 (70596): Guest Log: ATHENA_PROC_NUMBER=2
2026-05-17 12:20:42 (70596): Guest Log: ATHENA_CORE_NUMBER=2
2026-05-17 12:20:42 (70596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-17 12:20:42 (70596): Guest Log:  *** Starting ATLAS job. (PandaID=7139272670 taskID=50087078) ***
2026-05-17 13:59:34 (70596): Status Report: Elapsed Time: '6000.000000'
2026-05-17 13:59:34 (70596): Status Report: CPU Time: '8854.800000'
2026-05-17 15:39:16 (70596): Status Report: Elapsed Time: '12000.000000'
2026-05-17 15:39:16 (70596): Status Report: CPU Time: '17951.000000'
2026-05-17 15:51:49 (70596): Guest Log:  *** Job finished ***
2026-05-17 15:51:49 (70596): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:53,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:53,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:53,406 | INFO     | [monitor] cgroup control has ended
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:53,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122215192384)>', '<ExcThread(monitor, started 140121923888896)>']
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:54,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:54,086 | INFO     | [monitor] control thread has ended
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,737 | INFO     | all workflow threads have been joined
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,737 | INFO     | end of generic workflow (traces error code: 0)
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,738 | INFO     | traces error code: 0
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,847 [wrapper] ==== pilot stdout END ====
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,851 [wrapper] ==== wrapper stdout RESUME ====
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,855 [wrapper] pilotpid: 5922
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,859 [wrapper] Pilot exit status: 0
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:58,970 [wrapper] pandaids: 7139272670
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:59,059 [wrapper] cleanup supervisor_pilot 28208 5923
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:59,069 [wrapper] Test setup, not cleaning
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:59,074 [wrapper] apfmon messages muted
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:59,079 [wrapper] ==== wrapper stdout END ====
2026-05-17 15:51:49 (70596): Guest Log: 2026-05-17 14:51:59,084 [wrapper] ==== wrapper stderr END ====
2026-05-17 15:51:49 (70596): Guest Log:  *** Error codes and diagnostics ***
2026-05-17 15:51:49 (70596): Guest Log:     "exeErrorCode": 0,
2026-05-17 15:51:49 (70596): Guest Log:     "pilotErrorCode": 0,
2026-05-17 15:51:49 (70596): Guest Log:  *** Listing of results directory ***
2026-05-17 15:51:49 (70596): Guest Log: total 186096
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May 16 23:04 pilot3.tar.gz
2026-05-17 15:51:49 (70596): Guest Log: -rwx------. 1 atlas atlas     36281 May 16 23:05 runpilot2-wrapper.sh
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 16 23:16 queuedata.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-r-----. 1 atlas atlas     15667 May 17 11:20 start_atlas.sh
2026-05-17 15:51:49 (70596): Guest Log: -rw-r-----. 1 atlas atlas    697427 May 17 11:20 input.tar.gz
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas      7579 May 17 11:20 init_data.xml
2026-05-17 15:51:49 (70596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 11:20 EVNT.46701437._000934.pool.root.1 -> /data/./ATLAS.root_0
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas      2568 May 17 11:20 pandaJob.out
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas    993473 May 17 11:21 agis_schedconf.cvmfs.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas       427 May 17 11:21 workernode_map.json
2026-05-17 15:51:49 (70596): Guest Log: drwx------. 5 atlas atlas      4096 May 17 11:21 pilot3
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas 183602829 May 17 14:50 HITS.50087078._014236.pool.root.1
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas      1032 May 17 14:51 memory_monitor_summary.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas   1502367 May 17 14:51 agis_ddmendpoints.agis.ALL.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas    320614 May 17 14:51 log.50087078._014236.job.log.tgz.1
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas      6400 May 17 14:51 heartbeat_new.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas      6291 May 17 14:51 heartbeat.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas        95 May 17 14:51 pilot_heartbeat.json
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas      4876 May 17 14:51 pilotlog.txt
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas   1136376 May 17 14:51 log.50087078._014236.job.log.1
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas       357 May 17 14:51 output.list
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 17 14:51 runtime_log
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas   1474560 May 17 14:51 result.tar.gz
2026-05-17 15:51:49 (70596): Guest Log: -rw-r--r--. 1 atlas atlas      8384 May 17 14:51 runtime_log.err
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas       660 May 17 14:51 f8448c480b8d.diag
2026-05-17 15:51:49 (70596): Guest Log: Looking for outputfile HITS.50087078._014236.pool.root.1
2026-05-17 15:51:49 (70596): Guest Log: HITS file was successfully produced
2026-05-17 15:51:49 (70596): Guest Log: -rw-------. 1 atlas atlas 183602829 May 17 14:50 /home/atlas/RunAtlas/HITS.50087078._014236.pool.root.1
2026-05-17 15:51:49 (70596): Guest Log: Successfully finished the ATLAS job!
2026-05-17 15:51:49 (70596): Guest Log: Copying the results back to the shared directory!
2026-05-17 15:51:49 (70596): Guest Log:  *** Contents of shared directory: ***
2026-05-17 15:51:50 (70596): Guest Log: total 428044
2026-05-17 15:51:50 (70596): Guest Log: -rw-rw----. 1 root root 436113905 May 17 11:19 ATLAS.root_0
2026-05-17 15:51:50 (70596): Guest Log: -rw-rw-r--. 1 root root      7579 May 17 11:19 init_data.xml
2026-05-17 15:51:50 (70596): Guest Log: -rw-rw----. 1 root root    697427 May 17 11:19 input.tar.gz
2026-05-17 15:51:50 (70596): Guest Log: -rw-r--r--. 1 root root   1474560 May 17 14:51 result.tar.gz
2026-05-17 15:51:50 (70596): Guest Log: -rw-rw----. 1 root root     15667 May 17 11:19 start_atlas.sh
2026-05-17 15:51:50 (70596): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-17 15:51:50 (70596): VM Completion File Detected.
2026-05-17 15:51:50 (70596): Powering off VM.
2026-05-17 15:51:50 (70596): Successfully stopped VM.
2026-05-17 15:51:50 (70596): Deregistering VM. (boinc_9a0f953d02fe5aa4, slot#1)
2026-05-17 15:51:50 (70596): Removing network bandwidth throttle group from VM.
2026-05-17 15:51:50 (70596): Removing VM from VirtualBox.
2026-05-17 15:51:55 (70596): called boinc_finish(0)

</stderr_txt>
]]>

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