Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:43:49 (19641): wrapper (7.7.26015): starting
17:43:49 (19641): wrapper: running run_atlas (--nthreads 8)
[2026-05-16 17:43:49] Arguments: --nthreads 8
[2026-05-16 17:43:49] Threads: 8
[2026-05-16 17:43:49] Checking for CVMFS
[2026-05-16 17:43:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 17:43:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 17:43:49] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 17:43:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 17:43:49] 2.11.2.0 2812 91068 74640 159587 2 49 20229941 20275201 1 130560 0 19805852 99.898 4024232 31000 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-16 17:43:49] CVMFS is ok
[2026-05-16 17:43:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-16 17:43:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-16 17:43:49] Further information can be found at the LHC@home message board.
[2026-05-16 17:43:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 17:43:49] Checking for apptainer binary...
[2026-05-16 17:43:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 17:43:49] Running /usr/bin/apptainer --version
[2026-05-16 17:43:49] apptainer version 1.3.2-1.el7
[2026-05-16 17:43:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 17:43:51] c-204-32.aglt2.org
[2026-05-16 17:43:51] apptainer works
[2026-05-16 17:43:51] Set ATHENA_PROC_NUMBER=8
[2026-05-16 17:43:51] Set ATHENA_CORE_NUMBER=8
[2026-05-16 17:43:51] Starting ATLAS job with PandaID=7139194914
[2026-05-16 17:43:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-16 19:45:36]  *** The last 200 lines of the pilot log: ***
[2026-05-16 19:45:36] 2026-05-16 23:44:47,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-16 19:45:36] 2026-05-16 23:44:48,080 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-16 19:45:36] 2026-05-16 23:44:50,208 | INFO     | monitor loop #550: job 0:7139194914 is in state 'finished'
[2026-05-16 19:45:36] 2026-05-16 23:44:50,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-16 19:45:36] 2026-05-16 23:44:50,449 | INFO     | PID=23733 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,001 | INFO     | job 7139194914 has state=finished
[2026-05-16 19:45:36] 2026-05-16 23:44:51,001 | INFO     | preparing for final server update for job 7139194914 in state='finished'
[2026-05-16 19:45:36] 2026-05-16 23:44:51,001 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7139194914/jobReport.json
[2026-05-16 19:45:36] 2026-05-16 23:44:51,005 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-16 19:45:36] 2026-05-16 23:44:51,005 | INFO     | this job has now completed (state=finished)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,005 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,005 | INFO     | log transfer has been attempted: DONE
[2026-05-16 19:45:36] 2026-05-16 23:44:51,005 | INFO     | job 7139194914 has finished - writing final server update
[2026-05-16 19:45:36] 2026-05-16 23:44:51,006 | INFO     | total number of processed events: 400 (read)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,007 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7139194914/memory_monitor_summary.json (trf name=prmon)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,008 | INFO     | extracted standard info from prmon json
[2026-05-16 19:45:36] 2026-05-16 23:44:51,008 | INFO     | extracted standard memory fields from prmon json
[2026-05-16 19:45:36] 2026-05-16 23:44:51,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-16 19:45:36] 2026-05-16 23:44:51,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-16 19:45:36] 2026-05-16 23:44:51,010 | INFO     | fitting pss+swap vs Time
[2026-05-16 19:45:36] 2026-05-16 23:44:51,011 | INFO     | sum of square deviations: 509440249.5
[2026-05-16 19:45:36] 2026-05-16 23:44:51,011 | INFO     | sum of deviations: 3938519686.499992
[2026-05-16 19:45:36] 2026-05-16 23:44:51,011 | INFO     | mean x (centered): 0.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,012 | INFO     | mean y: 2510278.1440677964
[2026-05-16 19:45:36] 2026-05-16 23:44:51,012 | INFO     | intersect: 2510278.1440677964
[2026-05-16 19:45:36] 2026-05-16 23:44:51,012 | INFO     | chi2: 1.7251209363020594
[2026-05-16 19:45:36] 2026-05-16 23:44:51,012 | INFO     | sum of square deviations: 447383272.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,013 | INFO     | sum of deviations: 3973990972.9999948
[2026-05-16 19:45:36] 2026-05-16 23:44:51,013 | INFO     | mean x (centered): 0.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,013 | INFO     | mean y: 2510365.389380531
[2026-05-16 19:45:36] 2026-05-16 23:44:51,013 | INFO     | intersect: 2510365.389380531
[2026-05-16 19:45:36] 2026-05-16 23:44:51,013 | INFO     | chi2: 1.7276550031010776
[2026-05-16 19:45:36] 2026-05-16 23:44:51,014 | INFO     | current chi2=1.7276550031010776 (change=-0.14689212481822372 %)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,014 | INFO     | right removable region: 112
[2026-05-16 19:45:36] 2026-05-16 23:44:51,014 | INFO     | sum of square deviations: 447383272.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | sum of deviations: -14469054271.000002
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | mean x (centered): 0.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | mean y: 2554626.681415929
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | intersect: 2554626.681415929
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | chi2: 0.12412664483266855
[2026-05-16 19:45:36] 2026-05-16 23:44:51,015 | INFO     | current chi2=0.12412664483266855 (change=92.8047569175791 %)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,016 | INFO     | sum of square deviations: 390582207.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,016 | INFO     | sum of deviations: -13909274839.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,016 | INFO     | mean x (centered): 0.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,016 | INFO     | mean y: 2552971.592592593
[2026-05-16 19:45:36] 2026-05-16 23:44:51,016 | INFO     | intersect: 2552971.592592593
[2026-05-16 19:45:36] 2026-05-16 23:44:51,017 | INFO     | chi2: 0.10510825531930963
[2026-05-16 19:45:36] 2026-05-16 23:44:51,017 | INFO     | current chi2=0.10510825531930963 (change=15.321762333137295 %)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,017 | INFO     | left removable region: 10
[2026-05-16 19:45:36] 2026-05-16 23:44:51,017 | INFO     | sum of square deviations: 329031285.5
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | sum of deviations: -13018836855.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | mean x (centered): 0.0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | mean y: 2555622.9411764704
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | intersect: 2555622.9411764704
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | chi2: 0.10016334431197468
[2026-05-16 19:45:36] 2026-05-16 23:44:51,018 | INFO     | current memory leak: -39.57 B/s (using 102 data points, chi2=0.10)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | ..............................
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | . Timing measurements:
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | . get job = 0 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | . initial setup = 8 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,019 | INFO     | . payload setup = 14 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,020 | INFO     | . stage-in = 0 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,020 | INFO     | . payload execution = 7193 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,020 | INFO     | . stage-out = 0 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,020 | INFO     | . log creation = 0 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,020 | INFO     | ..............................
[2026-05-16 19:45:36] 2026-05-16 23:44:51,103 | INFO     | 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,104 | INFO     | job summary report
[2026-05-16 19:45:36] 2026-05-16 23:44:51,104 | INFO     | --------------------------------------------------
[2026-05-16 19:45:36] 2026-05-16 23:44:51,104 | INFO     | PanDA job id: 7139194914
[2026-05-16 19:45:36] 2026-05-16 23:44:51,104 | INFO     | task id: 50087078
[2026-05-16 19:45:36] 2026-05-16 23:44:51,104 | INFO     | errors: (none)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | pilot state: finished 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | transexitcode: 0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | exeerrorcode: 0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | exeerrordiag: 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,105 | INFO     | exitcode: 0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | exitmsg: OK
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | cpuconsumptiontime: 52948 s
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | nevents: 400
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | neventsw: 0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | pid: 28123
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | pgrp: 28123
[2026-05-16 19:45:36] 2026-05-16 23:44:51,106 | INFO     | corecount: 8
[2026-05-16 19:45:36] 2026-05-16 23:44:51,107 | INFO     | event service: False
[2026-05-16 19:45:36] 2026-05-16 23:44:51,107 | INFO     | sizes: {0: 2265902, 1: 2267504, 11: 2267504, 7212: 2294870, 7214: 2303868, 7217: 2303924, 7220: 2304246}
[2026-05-16 19:45:36] 2026-05-16 23:44:51,107 | INFO     | --------------------------------------------------
[2026-05-16 19:45:36] 2026-05-16 23:44:51,107 | INFO     | 
[2026-05-16 19:45:36] 2026-05-16 23:44:51,107 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-16 19:45:36] 2026-05-16 23:44:51,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,138 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-16 19:45:36] 2026-05-16 23:44:51,140 | INFO     | job 7139194914 has completed (purged errors)
[2026-05-16 19:45:36] 2026-05-16 23:44:51,140 | INFO     | overall cleanup function is called
[2026-05-16 19:45:36] 2026-05-16 23:44:52,146 | INFO     | --- collectZombieJob: --- 10, [28123]
[2026-05-16 19:45:36] 2026-05-16 23:44:52,147 | INFO     | zombie collector waiting for pid 28123
[2026-05-16 19:45:36] 2026-05-16 23:44:52,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-16 19:45:36] 2026-05-16 23:44:52,147 | INFO     | collected zombie processes
[2026-05-16 19:45:36] 2026-05-16 23:44:52,147 | INFO     | will attempt to kill all subprocesses of pid=28123
[2026-05-16 19:45:36] 2026-05-16 23:44:52,221 | INFO     | process IDs to be killed: [28123] (in reverse order)
[2026-05-16 19:45:36] 2026-05-16 23:44:52,278 | WARNING  | found no corresponding commands to process id(s)
[2026-05-16 19:45:36] 2026-05-16 23:44:52,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-16 19:45:36] 2026-05-16 23:44:52,283 | INFO     | did not find any defunct processes belonging to 28123
[2026-05-16 19:45:36] 2026-05-16 23:44:52,286 | INFO     | did not find any defunct processes belonging to 28123
[2026-05-16 19:45:36] 2026-05-16 23:44:52,286 | INFO     | Ready for new job
[2026-05-16 19:45:36] 2026-05-16 23:44:52,288 | INFO     | ***************************************
[2026-05-16 19:45:36] 2026-05-16 23:44:52,288 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-16 19:45:36] 2026-05-16 23:44:52,288 | INFO     | ***************************************
[2026-05-16 19:45:36] 2026-05-16 23:44:52,288 | INFO     | 
[2026-05-16 19:45:36] 2026-05-16 23:44:52,289 | INFO     | architecture information:
[2026-05-16 19:45:36] 2026-05-16 23:44:52,289 | INFO     | executing command: cat /etc/os-release
[2026-05-16 19:45:36] 2026-05-16 23:44:52,307 | INFO     | cat /etc/os-release:
[2026-05-16 19:45:36] NAME="CentOS Linux"
[2026-05-16 19:45:36] VERSION="7 (Core)"
[2026-05-16 19:45:36] ID="centos"
[2026-05-16 19:45:36] ID_LIKE="rhel fedora"
[2026-05-16 19:45:36] VERSION_ID="7"
[2026-05-16 19:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-16 19:45:36] ANSI_COLOR="0;31"
[2026-05-16 19:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-16 19:45:36] HOME_URL="https://www.centos.org/"
[2026-05-16 19:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-16 19:45:36] 
[2026-05-16 19:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-16 19:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-16 19:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-16 19:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-16 19:45:36] 
[2026-05-16 19:45:36] 2026-05-16 23:44:52,307 | INFO     | ***************************************
[2026-05-16 19:45:36] 2026-05-16 23:44:52,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-16 19:45:36] 2026-05-16 23:44:52,831 | INFO     | sufficient remaining disk space (18079547392 B)
[2026-05-16 19:45:36] 2026-05-16 23:44:52,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-16 19:45:36] 2026-05-16 23:44:52,831 | INFO     | current server update state: UPDATING_FINAL
[2026-05-16 19:45:36] 2026-05-16 23:44:52,831 | INFO     | update_server=False
[2026-05-16 19:45:36] 2026-05-16 23:44:52,832 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-16 19:45:36] 2026-05-16 23:44:52,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-16 19:45:36] 2026-05-16 23:44:52,942 | INFO     | all job control threads have been joined
[2026-05-16 19:45:36] 2026-05-16 23:44:52,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-16 19:45:36] 2026-05-16 23:44:53,592 | INFO     | all payload control threads have been joined
[2026-05-16 19:45:36] 2026-05-16 23:44:53,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-16 19:45:36] 2026-05-16 23:44:53,713 | INFO     | aborting loop
[2026-05-16 19:45:36] 2026-05-16 23:44:53,837 | INFO     | [job] retrieve thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:53,838 | INFO     | [job] queue monitor thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:53,916 | INFO     | all data control threads have been joined
[2026-05-16 19:45:36] 2026-05-16 23:44:53,944 | INFO     | [job] control thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:53,979 | INFO     | [payload] execute_payloads thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:53,982 | INFO     | [payload] failed_post thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,036 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,106 | INFO     | [job] validate thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,115 | INFO     | [payload] validate_pre thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-16 19:45:36] 2026-05-16 23:44:54,250 | INFO     | [job] create_data_payload thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,597 | INFO     | [payload] control thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,718 | INFO     | [job] job monitor thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,755 | INFO     | [payload] validate_post thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,922 | INFO     | [data] control thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:54,986 | INFO     | [data] copytool_out thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:55,195 | INFO     | [data] copytool_in thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:44:58,176 | INFO     | [data] queue_monitor thread has finished
[2026-05-16 19:45:36] 2026-05-16 23:45:22,664 | INFO     | PID=23733 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 19:45:36] 2026-05-16 23:45:22,665 | INFO     | found 0 job(s) in 20 queues
[2026-05-16 19:45:36] 2026-05-16 23:45:22,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-16 19:45:36] 2026-05-16 23:45:22,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-16 19:45:36] 2026-05-16 23:45:30,855 | INFO     | [monitor] cgroup control has ended
[2026-05-16 19:45:36] 2026-05-16 23:45:31,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101259138880)>', '<ExcThread(monitor, started 140100088362752)>']
[2026-05-16 19:45:36] 2026-05-16 23:45:31,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-16 19:45:36] 2026-05-16 23:45:31,712 | INFO     | [monitor] control thread has ended
[2026-05-16 19:45:36] 2026-05-16 23:45:36,486 | INFO     | all workflow threads have been joined
[2026-05-16 19:45:36] 2026-05-16 23:45:36,486 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-16 19:45:36] 2026-05-16 23:45:36,486 | INFO     | traces error code: 0
[2026-05-16 19:45:36] 2026-05-16 23:45:36,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-16 19:45:36] 2026-05-16 23:45:36,592 [wrapper] ==== pilot stdout END ====
[2026-05-16 19:45:36] 2026-05-16 23:45:36,596 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-16 19:45:36] 2026-05-16 23:45:36,601 [wrapper] pilotpid: 23733
[2026-05-16 19:45:36] 2026-05-16 23:45:36,606 [wrapper] Pilot exit status: 0
[2026-05-16 19:45:36] 2026-05-16 23:45:36,625 [wrapper] pandaids: 7139194914
[2026-05-16 19:45:36] 2026-05-16 23:45:36,680 [wrapper] cleanup supervisor_pilot 18580 23734
[2026-05-16 19:45:36] 2026-05-16 23:45:36,686 [wrapper] Test setup, not cleaning
[2026-05-16 19:45:36] 2026-05-16 23:45:36,691 [wrapper] apfmon messages muted
[2026-05-16 19:45:36] 2026-05-16 23:45:36,696 [wrapper] ==== wrapper stdout END ====
[2026-05-16 19:45:36] 2026-05-16 23:45:36,700 [wrapper] ==== wrapper stderr END ====
[2026-05-16 19:45:36]  *** Error codes and diagnostics ***
[2026-05-16 19:45:36]     "exeErrorCode": 0,
[2026-05-16 19:45:36]     "pilotErrorCode": 0,
[2026-05-16 19:45:36]  *** Listing of results directory ***
[2026-05-16 19:45:36] total 616884
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas    683926 May 16 14:10 pilot3.tar.gz
[2026-05-16 19:45:36] -rwx------ 1 boincer umatlas     36281 May 16 14:34 runpilot2-wrapper.sh
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas      5631 May 16 14:38 queuedata.json
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas       100 May 16 17:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-16 19:45:36] -rwxr-xr-x 1 boincer umatlas      7986 May 16 17:43 run_atlas
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas       105 May 16 17:43 job.xml
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas 437363310 May 16 17:43 EVNT.46701437._000908.pool.root.1
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas    697422 May 16 17:43 input.tar.gz
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas     15667 May 16 17:43 start_atlas.sh
[2026-05-16 19:45:36] drwxrwx--x 2 boincer umatlas      4096 May 16 17:43 shared
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas         0 May 16 17:43 boinc_lockfile
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas      2567 May 16 17:43 pandaJob.out
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas        57 May 16 17:43 setup.sh.local
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas    993489 May 16 17:44 agis_schedconf.cvmfs.json
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas   1502367 May 16 17:44 agis_ddmendpoints.agis.ALL.json
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas       433 May 16 17:44 workernode_map.json
[2026-05-16 19:45:36] drwx------ 5 boincer umatlas      4096 May 16 17:44 pilot3
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas      5826 May 16 19:37 init_data.xml
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas 188192976 May 16 19:44 HITS.50087078._012906.pool.root.1
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas       488 May 16 19:44 boinc_task_state.xml
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas      1048 May 16 19:44 memory_monitor_summary.json
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas    334150 May 16 19:44 log.50087078._012906.job.log.tgz.1
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas      6428 May 16 19:44 heartbeat_new.json
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas      6319 May 16 19:44 heartbeat.json
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas        95 May 16 19:45 pilot_heartbeat.json
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas      8192 May 16 19:45 boinc_mmap_file
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas        27 May 16 19:45 wrapper_checkpoint.txt
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas      4745 May 16 19:45 pilotlog.txt
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas    673711 May 16 19:45 log.50087078._012906.job.log.1
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas       357 May 16 19:45 output.list
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas       410 May 16 19:45 runtime_log
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas   1024000 May 16 19:45 result.tar.gz
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas      8964 May 16 19:45 runtime_log.err
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas       659 May 16 19:45 b8b99a97e2b6.diag
[2026-05-16 19:45:36] -rw-r--r-- 1 boincer umatlas     21340 May 16 19:45 stderr.txt
[2026-05-16 19:45:36] HITS file was successfully produced:
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas 188192976 May 16 19:44 shared/HITS.pool.root.1
[2026-05-16 19:45:36]  *** Contents of shared directory: ***
[2026-05-16 19:45:36] total 612600
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas 437363310 May 16 17:43 ATLAS.root_0
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas    697422 May 16 17:43 input.tar.gz
[2026-05-16 19:45:36] -rw-r--r-- 2 boincer umatlas     15667 May 16 17:43 start_atlas.sh
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas 188192976 May 16 19:44 HITS.pool.root.1
[2026-05-16 19:45:36] -rw------- 1 boincer umatlas   1024000 May 16 19:45 result.tar.gz
19:45:38 (19641): run_atlas exited; CPU time 52892.479927
19:45:38 (19641): called boinc_finish(0)

</stderr_txt>
]]>

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