Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:52:58 (12810): wrapper (7.7.26015): starting
23:52:58 (12810): wrapper: running run_atlas (--nthreads 8)
[2026-05-16 23:52:58] Arguments: --nthreads 8
[2026-05-16 23:52:58] Threads: 8
[2026-05-16 23:52:58] Checking for CVMFS
[2026-05-16 23:52:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 23:53:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 23:53:03] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 23:53:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 23:53:04] 2.11.2.0 8887 44947 125524 159587 1 53 24544186 25165825 96 130560 0 89078564 99.959 18611950 14099 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-16 23:53:04] CVMFS is ok
[2026-05-16 23:53:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 23:53:04] Checking for apptainer binary...
[2026-05-16 23:53:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 23:53:04] Running /usr/bin/apptainer --version
[2026-05-16 23:53:04] apptainer version 1.3.2-1.el7
[2026-05-16 23:53:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 23:53:09] cg-vwn308.simple-grid.lan
[2026-05-16 23:53:09] apptainer works
[2026-05-16 23:53:09] Set ATHENA_PROC_NUMBER=8
[2026-05-16 23:53:09] Set ATHENA_CORE_NUMBER=8
[2026-05-16 23:53:09] Starting ATLAS job with PandaID=7138654090
[2026-05-16 23:53:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 03:49:07]  *** The last 200 lines of the pilot log: ***
[2026-05-17 03:49:07] 2026-05-17 01:48:23,536 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 03:49:07] 2026-05-17 01:48:23,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 03:49:07] 2026-05-17 01:48:23,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 03:49:07] 2026-05-17 01:48:23,545 | INFO     | fitting pss+swap vs Time
[2026-05-17 03:49:07] 2026-05-17 01:48:23,546 | INFO     | sum of square deviations: 3256879670.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,547 | INFO     | sum of deviations: 117477413518.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,548 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,548 | INFO     | mean y: 2391875.5479452056
[2026-05-17 03:49:07] 2026-05-17 01:48:23,548 | INFO     | intersect: 2391875.5479452056
[2026-05-17 03:49:07] 2026-05-17 01:48:23,548 | INFO     | chi2: 10.727570365721318
[2026-05-17 03:49:07] 2026-05-17 01:48:23,549 | INFO     | sum of square deviations: 3038856977.5
[2026-05-17 03:49:07] 2026-05-17 01:48:23,551 | INFO     | sum of deviations: 129254457513.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,551 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,551 | INFO     | mean y: 2399926.448598131
[2026-05-17 03:49:07] 2026-05-17 01:48:23,551 | INFO     | intersect: 2399926.448598131
[2026-05-17 03:49:07] 2026-05-17 01:48:23,551 | INFO     | chi2: 10.06558122038313
[2026-05-17 03:49:07] 2026-05-17 01:48:23,552 | INFO     | current chi2=10.06558122038313 (change=6.170914035236682 %)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,552 | INFO     | right removable region: 213
[2026-05-17 03:49:07] 2026-05-17 01:48:23,552 | INFO     | sum of square deviations: 3038856977.5
[2026-05-17 03:49:07] 2026-05-17 01:48:23,554 | INFO     | sum of deviations: 38074686041.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,554 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,554 | INFO     | mean y: 2447421.074766355
[2026-05-17 03:49:07] 2026-05-17 01:48:23,554 | INFO     | intersect: 2447421.074766355
[2026-05-17 03:49:07] 2026-05-17 01:48:23,555 | INFO     | chi2: 4.786082532741524
[2026-05-17 03:49:07] 2026-05-17 01:48:23,555 | INFO     | current chi2=4.786082532741524 (change=55.38521426962731 %)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,555 | INFO     | sum of square deviations: 2830787960.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,557 | INFO     | sum of deviations: -23995721646.000004
[2026-05-17 03:49:07] 2026-05-17 01:48:23,557 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,557 | INFO     | mean y: 2492877.3588516745
[2026-05-17 03:49:07] 2026-05-17 01:48:23,557 | INFO     | intersect: 2492877.3588516745
[2026-05-17 03:49:07] 2026-05-17 01:48:23,558 | INFO     | chi2: 1.4872434452774412
[2026-05-17 03:49:07] 2026-05-17 01:48:23,558 | INFO     | current chi2=1.4872434452774412 (change=68.92566237411852 %)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,558 | INFO     | sum of square deviations: 2632440055.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,560 | INFO     | sum of deviations: -45844929053.99999
[2026-05-17 03:49:07] 2026-05-17 01:48:23,560 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,560 | INFO     | mean y: 2509530.4509803923
[2026-05-17 03:49:07] 2026-05-17 01:48:23,560 | INFO     | intersect: 2509530.4509803923
[2026-05-17 03:49:07] 2026-05-17 01:48:23,561 | INFO     | chi2: 0.8553239232420653
[2026-05-17 03:49:07] 2026-05-17 01:48:23,561 | INFO     | current chi2=0.8553239232420653 (change=42.489312966344464 %)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,561 | INFO     | sum of square deviations: 2443580700.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,568 | INFO     | sum of deviations: -43724687394.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,568 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,568 | INFO     | mean y: 2507812.718592965
[2026-05-17 03:49:07] 2026-05-17 01:48:23,568 | INFO     | intersect: 2507812.718592965
[2026-05-17 03:49:07] 2026-05-17 01:48:23,569 | INFO     | chi2: 0.8552323563921521
[2026-05-17 03:49:07] 2026-05-17 01:48:23,569 | INFO     | current chi2=0.8552323563921521 (change=0.01070551722277367 %)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,569 | INFO     | left removable region: 20
[2026-05-17 03:49:07] 2026-05-17 01:48:23,569 | INFO     | sum of square deviations: 2229146912.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,571 | INFO     | sum of deviations: -29294229348.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,571 | INFO     | mean x (centered): 0.0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,571 | INFO     | mean y: 2519844.5336787566
[2026-05-17 03:49:07] 2026-05-17 01:48:23,571 | INFO     | intersect: 2519844.5336787566
[2026-05-17 03:49:07] 2026-05-17 01:48:23,572 | INFO     | chi2: 0.059109820334282616
[2026-05-17 03:49:07] 2026-05-17 01:48:23,572 | INFO     | current memory leak: -13.14 B/s (using 193 data points, chi2=0.06)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,572 | INFO     | could have reported an average CPU frequency of 2000 MHz (11 samples)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | ..............................
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . Timing measurements:
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . get job = 0 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . initial setup = 148 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . payload setup = 182 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . stage-in = 0 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . payload execution = 13463 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . stage-out = 3 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | . log creation = 1 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,573 | INFO     | ..............................
[2026-05-17 03:49:07] 2026-05-17 01:48:23,742 | INFO     | 
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | job summary report
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | --------------------------------------------------
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | PanDA job id: 7138654090
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | task id: 50087155
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | errors: (none)
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 03:49:07] 2026-05-17 01:48:23,743 | INFO     | pilot state: finished 
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | transexitcode: 0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | exeerrorcode: 0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | exeerrordiag: 
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | exitcode: 0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | exitmsg: OK
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | cpuconsumptiontime: 49135 s
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | nevents: 400
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | neventsw: 0
[2026-05-17 03:49:07] 2026-05-17 01:48:23,744 | INFO     | pid: 21286
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | pgrp: 21286
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | corecount: 8
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | event service: False
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | sizes: {0: 2265043, 1: 2265728, 2: 2267557, 13: 2267557, 13649: 2297900, 13653: 2306898, 13656: 2307082, 13657: 2307276}
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | --------------------------------------------------
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | 
[2026-05-17 03:49:07] 2026-05-17 01:48:23,745 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-17 03:49:07] 2026-05-17 01:48:24,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 03:49:07] 2026-05-17 01:48:24,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,237 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 03:49:07] 2026-05-17 01:48:24,237 | INFO     | job 7138654090 has completed (purged errors)
[2026-05-17 03:49:07] 2026-05-17 01:48:24,237 | INFO     | overall cleanup function is called
[2026-05-17 03:49:07] 2026-05-17 01:48:25,246 | INFO     | --- collectZombieJob: --- 10, [21286]
[2026-05-17 03:49:07] 2026-05-17 01:48:25,247 | INFO     | zombie collector waiting for pid 21286
[2026-05-17 03:49:07] 2026-05-17 01:48:25,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 03:49:07] 2026-05-17 01:48:25,247 | INFO     | collected zombie processes
[2026-05-17 03:49:07] 2026-05-17 01:48:25,247 | INFO     | will attempt to kill all subprocesses of pid=21286
[2026-05-17 03:49:07] 2026-05-17 01:48:25,318 | INFO     | process IDs to be killed: [21286] (in reverse order)
[2026-05-17 03:49:07] 2026-05-17 01:48:26,147 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 03:49:07] 2026-05-17 01:48:26,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 03:49:07] 2026-05-17 01:48:26,150 | INFO     | did not find any defunct processes belonging to 21286
[2026-05-17 03:49:07] 2026-05-17 01:48:26,151 | INFO     | did not find any defunct processes belonging to 21286
[2026-05-17 03:49:07] 2026-05-17 01:48:26,152 | INFO     | Ready for new job
[2026-05-17 03:49:07] 2026-05-17 01:48:26,153 | INFO     | ***************************************
[2026-05-17 03:49:07] 2026-05-17 01:48:26,153 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 03:49:07] 2026-05-17 01:48:26,154 | INFO     | ***************************************
[2026-05-17 03:49:07] 2026-05-17 01:48:26,154 | INFO     | 
[2026-05-17 03:49:07] 2026-05-17 01:48:26,154 | INFO     | pilot is running in a VM
[2026-05-17 03:49:07] 2026-05-17 01:48:26,154 | INFO     | architecture information:
[2026-05-17 03:49:07] 2026-05-17 01:48:26,156 | INFO     | executing command: cat /etc/os-release
[2026-05-17 03:49:07] 2026-05-17 01:48:26,425 | INFO     | cat /etc/os-release:
[2026-05-17 03:49:07] NAME="CentOS Linux"
[2026-05-17 03:49:07] VERSION="7 (Core)"
[2026-05-17 03:49:07] ID="centos"
[2026-05-17 03:49:07] ID_LIKE="rhel fedora"
[2026-05-17 03:49:07] VERSION_ID="7"
[2026-05-17 03:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 03:49:07] ANSI_COLOR="0;31"
[2026-05-17 03:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 03:49:07] HOME_URL="https://www.centos.org/"
[2026-05-17 03:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 03:49:07] 
[2026-05-17 03:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 03:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 03:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 03:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 03:49:07] 
[2026-05-17 03:49:07] 2026-05-17 01:48:26,425 | INFO     | ***************************************
[2026-05-17 03:49:07] 2026-05-17 01:48:26,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-17 03:49:07] 2026-05-17 01:48:27,126 | INFO     | sufficient remaining disk space (493831061504 B)
[2026-05-17 03:49:07] 2026-05-17 01:48:27,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 03:49:07] 2026-05-17 01:48:27,127 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 03:49:07] 2026-05-17 01:48:27,127 | INFO     | update_server=False
[2026-05-17 03:49:07] 2026-05-17 01:48:27,127 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 03:49:07] 2026-05-17 01:48:27,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 03:49:07] 2026-05-17 01:48:27,130 | INFO     | aborting loop
[2026-05-17 03:49:07] 2026-05-17 01:48:27,307 | INFO     | all payload control threads have been joined
[2026-05-17 03:49:07] 2026-05-17 01:48:28,065 | INFO     | all data control threads have been joined
[2026-05-17 03:49:07] 2026-05-17 01:48:28,132 | INFO     | [job] retrieve thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,135 | INFO     | [job] job monitor thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,145 | INFO     | [job] validate thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 03:49:07] 2026-05-17 01:48:28,314 | INFO     | [payload] control thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,363 | INFO     | [data] copytool_in thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,435 | INFO     | all job control threads have been joined
[2026-05-17 03:49:07] 2026-05-17 01:48:28,518 | INFO     | [payload] failed_post thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:28,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 03:49:07] 2026-05-17 01:48:28,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 03:49:07] 2026-05-17 01:48:28,935 | INFO     | [payload] validate_post thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,072 | INFO     | [data] control thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,097 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,442 | INFO     | [job] control thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,553 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,559 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:29,763 | INFO     | [job] queue monitor thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:30,279 | INFO     | [data] copytool_out thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:32,828 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 03:49:07] 2026-05-17 01:48:55,930 | INFO     | PID=16818 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-17 03:49:07] 2026-05-17 01:48:55,931 | INFO     | .. there are 2 such processes running
[2026-05-17 03:49:07] 2026-05-17 01:48:55,931 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 03:49:07] 2026-05-17 01:48:55,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 03:49:07] 2026-05-17 01:48:55,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 03:49:07] 2026-05-17 01:48:56,705 | INFO     | [monitor] cgroup control has ended
[2026-05-17 03:49:07] 2026-05-17 01:48:58,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087554012992)>', '<ExcThread(monitor, started 140086968563456)>']
[2026-05-17 03:49:07] 2026-05-17 01:48:58,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 03:49:07] 2026-05-17 01:48:58,949 | INFO     | [monitor] control thread has ended
[2026-05-17 03:49:07] 2026-05-17 01:49:03,636 | INFO     | all workflow threads have been joined
[2026-05-17 03:49:07] 2026-05-17 01:49:03,637 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 03:49:07] 2026-05-17 01:49:03,637 | INFO     | traces error code: 0
[2026-05-17 03:49:07] 2026-05-17 01:49:03,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 03:49:07] 2026-05-17 01:49:04,155 [wrapper] ==== pilot stdout END ====
[2026-05-17 03:49:07] 2026-05-17 01:49:04,262 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 03:49:07] 2026-05-17 01:49:04,339 [wrapper] pilotpid: 16818
[2026-05-17 03:49:07] 2026-05-17 01:49:04,438 [wrapper] Pilot exit status: 0
[2026-05-17 03:49:07] 2026-05-17 01:49:04,572 [wrapper] pandaids: 7138654090
[2026-05-17 03:49:07] 2026-05-17 01:49:05,001 [wrapper] cleanup supervisor_pilot 28221 16819
[2026-05-17 03:49:07] 2026-05-17 01:49:05,078 [wrapper] Test setup, not cleaning
[2026-05-17 03:49:07] 2026-05-17 01:49:05,192 [wrapper] apfmon messages muted
[2026-05-17 03:49:07] 2026-05-17 01:49:05,301 [wrapper] ==== wrapper stdout END ====
[2026-05-17 03:49:07] 2026-05-17 01:49:05,403 [wrapper] ==== wrapper stderr END ====
[2026-05-17 03:49:07]  *** Error codes and diagnostics ***
[2026-05-17 03:49:07]     "exeErrorCode": 0,
[2026-05-17 03:49:07]     "pilotErrorCode": 0,
[2026-05-17 03:49:07]  *** Listing of results directory ***
[2026-05-17 03:49:07] total 1134320
[2026-05-17 03:49:07] -rwx------. 1 boinc boinc     36281 May 16 13:07 runpilot2-wrapper.sh
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc    683926 May 16 20:10 pilot3.tar.gz
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc      5631 May 16 20:18 queuedata.json
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc       100 May 16 23:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 03:49:07] -rwxr-xr-x. 1 boinc boinc      7986 May 16 23:52 run_atlas
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc       105 May 16 23:52 job.xml
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc      6304 May 16 23:52 init_data.xml
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc 988491741 May 16 23:52 EVNT.46375503._000294.pool.root.1
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc     15667 May 16 23:52 start_atlas.sh
[2026-05-17 03:49:07] drwxrwx--x. 2 boinc boinc        68 May 16 23:52 shared
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc    697431 May 16 23:52 input.tar.gz
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc         0 May 16 23:52 boinc_lockfile
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc      2585 May 16 23:53 pandaJob.out
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc       413 May 17 00:00 workernode_map.json
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc    993489 May 17 00:00 agis_schedconf.cvmfs.json
[2026-05-17 03:49:07] drwx------. 5 boinc boinc      4096 May 17 00:00 pilot3
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc 165548222 May 17 03:46 HITS.50087155._003799.pool.root.1
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc       489 May 17 03:47 boinc_task_state.xml
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc      1012 May 17 03:48 memory_monitor_summary.json
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc        95 May 17 03:48 pilot_heartbeat.json
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc   1502367 May 17 03:48 agis_ddmendpoints.agis.ALL.json
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc    425769 May 17 03:48 log.50087155._003799.job.log.tgz.1
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc      6342 May 17 03:48 heartbeat_new.json
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc      6233 May 17 03:48 heartbeat.json
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc      8192 May 17 03:48 boinc_mmap_file
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc        28 May 17 03:48 wrapper_checkpoint.txt
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc      4883 May 17 03:49 pilotlog.txt
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc   1274437 May 17 03:49 log.50087155._003799.job.log.1
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc       357 May 17 03:49 output.list
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc       410 May 17 03:49 runtime_log
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc   1720320 May 17 03:49 result.tar.gz
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc      8439 May 17 03:49 runtime_log.err
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc       655 May 17 03:49 50031bcaa0d4.diag
[2026-05-17 03:49:07] -rw-r--r--. 1 boinc boinc     20473 May 17 03:49 stderr.txt
[2026-05-17 03:49:07] HITS file was successfully produced:
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc 165548222 May 17 03:46 shared/HITS.pool.root.1
[2026-05-17 03:49:07]  *** Contents of shared directory: ***
[2026-05-17 03:49:07] total 1129376
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc 988491741 May 16 23:52 ATLAS.root_0
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc     15667 May 16 23:52 start_atlas.sh
[2026-05-17 03:49:07] -rw-r--r--. 2 boinc boinc    697431 May 16 23:52 input.tar.gz
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc 165548222 May 17 03:46 HITS.pool.root.1
[2026-05-17 03:49:07] -rw-------. 1 boinc boinc   1720320 May 17 03:49 result.tar.gz
03:49:08 (12810): run_atlas exited; CPU time 49268.879690
03:49:08 (12810): called boinc_finish(0)

</stderr_txt>
]]>

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