Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-16 15:29:34 (45778): vboxwrapper version 26210
2026-05-16 15:29:34 (45778): BOINC client version: 8.2.8
2026-05-16 15:29:35 (45778): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-16 15:29:35 (45778): Detected: Sandbox Configuration Enabled
2026-05-16 15:29:35 (45778): Successfully copied 'init_data.xml' to the shared directory.
2026-05-16 15:29:35 (45778): Create VM. (boinc_56127b19832bbcbb, slot#4)
2026-05-16 15:29:39 (45778): Setting Memory Size for VM. (4700MB)
2026-05-16 15:29:40 (45778): Setting CPU Count for VM. (7)
2026-05-16 15:29:40 (45778): Setting Chipset Options for VM.
2026-05-16 15:29:41 (45778): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-16 15:29:41 (45778): Setting Boot Options for VM.
2026-05-16 15:29:41 (45778): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-16 15:29:41 (45778): Enabling VM Network Access.
2026-05-16 15:29:41 (45778): Disabling USB Support for VM.
2026-05-16 15:29:41 (45778): Disabling COM Port Support for VM.
2026-05-16 15:29:42 (45778): Disabling Audio Support for VM.
2026-05-16 15:29:42 (45778): Disabling Clipboard Support for VM.
2026-05-16 15:29:42 (45778): Disabling Drag and Drop Support for VM.
2026-05-16 15:29:42 (45778): Adding storage controller(s) to VM.
2026-05-16 15:29:43 (45778): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-16 15:29:45 (45778): Adding VirtualBox Guest Additions to VM.
2026-05-16 15:29:45 (45778): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-16 15:29:46 (45778): forwarding host port 62226 to guest port 80
2026-05-16 15:29:46 (45778): Enabling remote desktop for VM.
2026-05-16 15:29:46 (45778): Required extension pack not installed, remote desktop not enabled.
2026-05-16 15:29:46 (45778): Enabling shared directory for VM.
2026-05-16 15:29:46 (45778): Starting VM using VBoxManage interface. (boinc_56127b19832bbcbb, slot#4)
2026-05-16 15:29:51 (45778): Successfully started VM. (PID = '45857')
2026-05-16 15:29:51 (45778): Reporting VM Process ID to BOINC.
2026-05-16 15:29:51 (45778): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-16 15:29:51 (45778): Guest Log: CPUID EDX: 0x178bfbff
2026-05-16 15:29:51 (45778): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-16 15:29:51 (45778): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-16 15:29:51 (45778): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-16 15:29:51 (45778): Detected: Web Application Enabled (http://localhost:62226)
2026-05-16 15:29:51 (45778): Preference change detected
2026-05-16 15:29:51 (45778): Setting CPU throttle for VM. (90%)
2026-05-16 15:29:51 (45778): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-16 15:29:53 (45778): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-16 15:29:53 (45778): Guest Log: BIOS: Booting from Hard Disk...
2026-05-16 15:29:57 (45778): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-16 15:29:57 (45778): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-16 15:29:57 (45778): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-16 15:30:06 (45778): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-16 15:30:06 (45778): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-16 15:30:21 (45778): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000249 main     Log opened 2026-05-16T20:30:22.512500000Z
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000381 main     OS Product: Linux
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000447 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000489 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000532 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000533 main     Process ID: 1358
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.000534 main     Package type: LINUX_64BITS_GENERIC
2026-05-16 15:30:21 (45778): Guest Log: 00:00:00.006436 main     5.2.32 r132073 started. Verbose level = 0
2026-05-16 15:30:22 (45778): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-16 15:30:22 (45778): Guest Log: [INFO] Mounting shared directory
2026-05-16 15:30:22 (45778): Guest Log: [INFO] Checking for init_data.xml
2026-05-16 15:30:32 (45778): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-16 15:30:32 (45778): Guest Log: [INFO] Detected branch: prod
2026-05-16 15:30:32 (45778): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-16 15:30:32 (45778): Guest Log: Copying input files
2026-05-16 15:30:44 (45778): Guest Log: Copied input files into RunAtlas.
2026-05-16 15:30:44 (45778): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-16 15:30:44 (45778): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-16 15:30:44 (45778): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-16 15:30:44 (45778): Guest Log: Further information can be found at the LHC@home message board.
2026-05-16 15:30:57 (45778): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-16 15:30:57 (45778): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-16 15:30:57 (45778): Guest Log: 2.6.3.0 1638 0 30152 159585 4 1 3117651 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-05-16 15:31:03 (45778): Guest Log: copied the webapp to /var/www
2026-05-16 15:31:03 (45778): Guest Log: ATHENA_PROC_NUMBER=7
2026-05-16 15:31:03 (45778): Guest Log: ATHENA_CORE_NUMBER=7
2026-05-16 15:31:03 (45778): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-16 15:31:03 (45778): Guest Log:  *** Starting ATLAS job. (PandaID=7138588502 taskID=50087078) ***
2026-05-16 17:09:17 (45778): Status Report: Elapsed Time: '6000.000000'
2026-05-16 17:09:17 (45778): Status Report: CPU Time: '26355.490000'
2026-05-16 17:36:03 (45778): Guest Log:  *** Job finished ***
2026-05-16 17:36:03 (45778): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:08,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:08,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:22,345 | INFO     | [monitor] cgroup control has ended
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:23,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291742570304)>', '<ExcThread(monitor, started 140291013080832)>']
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:24,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:24,702 | INFO     | [monitor] control thread has ended
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:28,791 | INFO     | all workflow threads have been joined
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:28,791 | INFO     | end of generic workflow (traces error code: 0)
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:28,791 | INFO     | traces error code: 0
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:28,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:29,389 [wrapper] ==== pilot stdout END ====
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:29,490 [wrapper] ==== wrapper stdout RESUME ====
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:29,500 [wrapper] pilotpid: 6084
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:29,620 [wrapper] Pilot exit status: 0
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:31,009 [wrapper] pandaids: 7138588502
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:31,655 [wrapper] cleanup supervisor_pilot 26564 6085
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:31,837 [wrapper] Test setup, not cleaning
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:32,016 [wrapper] apfmon messages muted
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:32,134 [wrapper] ==== wrapper stdout END ====
2026-05-16 17:36:03 (45778): Guest Log: 2026-05-16 22:36:32,365 [wrapper] ==== wrapper stderr END ====
2026-05-16 17:36:03 (45778): Guest Log:  *** Error codes and diagnostics ***
2026-05-16 17:36:03 (45778): Guest Log:     "exeErrorCode": 0,
2026-05-16 17:36:03 (45778): Guest Log:     "pilotErrorCode": 0,
2026-05-16 17:36:03 (45778): Guest Log:  *** Listing of results directory ***
2026-05-16 17:36:03 (45778): Guest Log: total 184128
2026-05-16 17:36:03 (45778): Guest Log: -rwx------. 1 atlas atlas     36281 May 16 10:24 runpilot2-wrapper.sh
2026-05-16 17:36:03 (45778): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May 16 18:10 pilot3.tar.gz
2026-05-16 17:36:03 (45778): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 16 18:18 queuedata.json
2026-05-16 17:36:03 (45778): Guest Log: -rw-r-----. 1 atlas atlas     15667 May 16 20:30 start_atlas.sh
2026-05-16 17:36:03 (45778): Guest Log: -rw-r-----. 1 atlas atlas    697430 May 16 20:30 input.tar.gz
2026-05-16 17:36:03 (45778): Guest Log: -rw-r--r--. 1 atlas atlas      7940 May 16 20:30 init_data.xml
2026-05-16 17:36:03 (45778): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 16 20:30 EVNT.46701437._000857.pool.root.1 -> /data/./ATLAS.root_0
2026-05-16 17:36:03 (45778): Guest Log: -rw-r--r--. 1 atlas atlas      2567 May 16 20:31 pandaJob.out
2026-05-16 17:36:03 (45778): Guest Log: -rw-------. 1 atlas atlas    993489 May 16 20:32 agis_schedconf.cvmfs.json
2026-05-16 17:36:03 (45778): Guest Log: -rw-------. 1 atlas atlas   1502367 May 16 20:32 agis_ddmendpoints.agis.ALL.json
2026-05-16 17:36:03 (45778): Guest Log: -rw-------. 1 atlas atlas       426 May 16 20:33 workernode_map.json
2026-05-16 17:36:04 (45778): Guest Log: drwx------. 5 atlas atlas      4096 May 16 20:33 pilot3
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas 182552763 May 16 22:34 HITS.50087078._010309.pool.root.1
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas      1028 May 16 22:35 memory_monitor_summary.json
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas    306199 May 16 22:35 log.50087078._010309.job.log.tgz.1
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas      6397 May 16 22:35 heartbeat_new.json
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas      6288 May 16 22:35 heartbeat.json
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas        95 May 16 22:36 pilot_heartbeat.json
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas      4804 May 16 22:36 pilotlog.txt
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas    664917 May 16 22:36 log.50087078._010309.job.log.1
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas       357 May 16 22:36 output.list
2026-05-16 17:36:04 (45778): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 16 22:36 runtime_log
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas    993280 May 16 22:36 result.tar.gz
2026-05-16 17:36:04 (45778): Guest Log: -rw-r--r--. 1 atlas atlas      8422 May 16 22:36 runtime_log.err
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas       672 May 16 22:36 45f9b6c9cc14.diag
2026-05-16 17:36:04 (45778): Guest Log: Looking for outputfile HITS.50087078._010309.pool.root.1
2026-05-16 17:36:04 (45778): Guest Log: HITS file was successfully produced
2026-05-16 17:36:04 (45778): Guest Log: -rw-------. 1 atlas atlas 182552763 May 16 22:34 /home/atlas/RunAtlas/HITS.50087078._010309.pool.root.1
2026-05-16 17:36:05 (45778): Guest Log: Successfully finished the ATLAS job!
2026-05-16 17:36:05 (45778): Guest Log: Copying the results back to the shared directory!
2026-05-16 17:36:05 (45778): Guest Log:  *** Contents of shared directory: ***
2026-05-16 17:36:05 (45778): Guest Log: total 444132
2026-05-16 17:36:05 (45778): Guest Log: -rw-rw----. 1 root root 436477234 May 16 20:29 ATLAS.root_0
2026-05-16 17:36:05 (45778): Guest Log: -rw-rw-r--. 1 root root      7940 May 16 20:29 init_data.xml
2026-05-16 17:36:05 (45778): Guest Log: -rw-rw----. 1 root root    697430 May 16 20:29 input.tar.gz
2026-05-16 17:36:05 (45778): Guest Log: -rw-r--r--. 1 root root    993280 May 16 22:36 result.tar.gz
2026-05-16 17:36:05 (45778): Guest Log: -rw-rw----. 1 root root     15667 May 16 20:29 start_atlas.sh
2026-05-16 17:36:05 (45778): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-16 17:36:05 (45778): VM Completion File Detected.
2026-05-16 17:36:05 (45778): Powering off VM.
2026-05-16 17:36:06 (45778): Successfully stopped VM.
2026-05-16 17:36:06 (45778): Deregistering VM. (boinc_56127b19832bbcbb, slot#4)
2026-05-16 17:36:06 (45778): Removing network bandwidth throttle group from VM.
2026-05-16 17:36:06 (45778): Removing VM from VirtualBox.
2026-05-16 17:36:11 (45778): called boinc_finish(0)

</stderr_txt>
]]>

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