Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:34 (32569): wrapper (7.7.26015): starting
17:14:34 (32569): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 17:14:34] Arguments: --nthreads 8
[2026-05-17 17:14:34] Threads: 8
[2026-05-17 17:14:34] Checking for CVMFS
[2026-05-17 17:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 17:14:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 17:14:37] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 17:14:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 17:14:38] 2.11.2.0 28445 45989 103260 159610 3 11 12782754 25165824 96 130560 0 20689633 99.903 9540031 16180 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 17:14:38] CVMFS is ok
[2026-05-17 17:14:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 17:14:39] Checking for apptainer binary...
[2026-05-17 17:14:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 17:14:39] Running /usr/bin/apptainer --version
[2026-05-17 17:14:39] apptainer version 1.3.2-1.el7
[2026-05-17 17:14:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 17:15:03] cg-vwn317.simple-grid.lan
[2026-05-17 17:15:03] apptainer works
[2026-05-17 17:15:03] Set ATHENA_PROC_NUMBER=8
[2026-05-17 17:15:03] Set ATHENA_CORE_NUMBER=8
[2026-05-17 17:15:03] Starting ATLAS job with PandaID=7134372208
[2026-05-17 17:15:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 20:46:14]  *** The last 200 lines of the pilot log: ***
[2026-05-17 20:46:14] 2026-05-17 18:45:36,582 | INFO     | total number of processed events: 400 (read)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,584 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7134372208/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,585 | INFO     | extracted standard info from prmon json
[2026-05-17 20:46:14] 2026-05-17 18:45:36,585 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 20:46:14] 2026-05-17 18:45:36,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 20:46:14] 2026-05-17 18:45:36,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 20:46:14] 2026-05-17 18:45:36,589 | INFO     | fitting pss+swap vs Time
[2026-05-17 20:46:14] 2026-05-17 18:45:36,590 | INFO     | sum of square deviations: 2299168690.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,591 | INFO     | sum of deviations: 42033882439.999985
[2026-05-17 20:46:14] 2026-05-17 18:45:36,591 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,592 | INFO     | mean y: 2445044.5846153847
[2026-05-17 20:46:14] 2026-05-17 18:45:36,592 | INFO     | intersect: 2445044.5846153847
[2026-05-17 20:46:14] 2026-05-17 18:45:36,592 | INFO     | chi2: 6.764805190180124
[2026-05-17 20:46:14] 2026-05-17 18:45:36,593 | INFO     | sum of square deviations: 2126802667.5
[2026-05-17 20:46:14] 2026-05-17 18:45:36,594 | INFO     | sum of deviations: 53788155897.49999
[2026-05-17 20:46:14] 2026-05-17 18:45:36,594 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,594 | INFO     | mean y: 2455206.3210526314
[2026-05-17 20:46:14] 2026-05-17 18:45:36,594 | INFO     | intersect: 2455206.3210526314
[2026-05-17 20:46:14] 2026-05-17 18:45:36,595 | INFO     | chi2: 6.0633049148181435
[2026-05-17 20:46:14] 2026-05-17 18:45:36,595 | INFO     | current chi2=6.0633049148181435 (change=10.369851838162127 %)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,595 | INFO     | right removable region: 189
[2026-05-17 20:46:14] 2026-05-17 18:45:36,595 | INFO     | sum of square deviations: 2126802667.5
[2026-05-17 20:46:14] 2026-05-17 18:45:36,597 | INFO     | sum of deviations: -24694161916.5
[2026-05-17 20:46:14] 2026-05-17 18:45:36,597 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,597 | INFO     | mean y: 2504015.3947368423
[2026-05-17 20:46:14] 2026-05-17 18:45:36,597 | INFO     | intersect: 2504015.3947368423
[2026-05-17 20:46:14] 2026-05-17 18:45:36,597 | INFO     | chi2: 1.9679530663609832
[2026-05-17 20:46:14] 2026-05-17 18:45:36,598 | INFO     | current chi2=1.9679530663609832 (change=70.90894695359907 %)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,598 | INFO     | sum of square deviations: 1963274020.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,602 | INFO     | sum of deviations: -50213763694.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,603 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,603 | INFO     | mean y: 2527602.0972972973
[2026-05-17 20:46:14] 2026-05-17 18:45:36,603 | INFO     | intersect: 2527602.0972972973
[2026-05-17 20:46:14] 2026-05-17 18:45:36,603 | INFO     | chi2: 0.9934597638887814
[2026-05-17 20:46:14] 2026-05-17 18:45:36,603 | INFO     | current chi2=0.9934597638887814 (change=49.51811702878536 %)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,604 | INFO     | sum of square deviations: 1808350185.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,605 | INFO     | sum of deviations: -46918348280.50001
[2026-05-17 20:46:14] 2026-05-17 18:45:36,605 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,605 | INFO     | mean y: 2524319.2055555554
[2026-05-17 20:46:14] 2026-05-17 18:45:36,605 | INFO     | intersect: 2524319.2055555554
[2026-05-17 20:46:14] 2026-05-17 18:45:36,606 | INFO     | chi2: 0.9842868283373598
[2026-05-17 20:46:14] 2026-05-17 18:45:36,606 | INFO     | current chi2=0.9842868283373598 (change=0.9233323668303632 %)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,606 | INFO     | left removable region: 15
[2026-05-17 20:46:14] 2026-05-17 18:45:36,606 | INFO     | sum of square deviations: 1633472487.5
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | sum of deviations: -33689244303.50001
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | mean x (centered): 0.0
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | mean y: 2537812.959770115
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | intersect: 2537812.959770115
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | chi2: 0.18126593369182492
[2026-05-17 20:46:14] 2026-05-17 18:45:36,608 | INFO     | current memory leak: -20.62 B/s (using 174 data points, chi2=0.18)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | ..............................
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | . Timing measurements:
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | . get job = 0 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | . initial setup = 99 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,609 | INFO     | . payload setup = 184 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,610 | INFO     | . stage-in = 0 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,610 | INFO     | . payload execution = 12028 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,610 | INFO     | . stage-out = 3 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,610 | INFO     | . log creation = 1 s
[2026-05-17 20:46:14] 2026-05-17 18:45:36,610 | INFO     | ..............................
[2026-05-17 20:46:14] 2026-05-17 18:45:37,211 | INFO     | 
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | job summary report
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | --------------------------------------------------
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | PanDA job id: 7134372208
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | task id: 50087071
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | errors: (none)
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | pilot state: finished 
[2026-05-17 20:46:14] 2026-05-17 18:45:37,212 | INFO     | transexitcode: 0
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | exeerrorcode: 0
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | exeerrordiag: 
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | exitcode: 0
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | exitmsg: OK
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | cpuconsumptiontime: 50297 s
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | nevents: 400
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | neventsw: 0
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | pid: 8624
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | pgrp: 8624
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | corecount: 8
[2026-05-17 20:46:14] 2026-05-17 18:45:37,213 | INFO     | event service: False
[2026-05-17 20:46:14] 2026-05-17 18:45:37,214 | INFO     | sizes: {0: 2265606, 1: 2267435, 12: 2267435, 12216: 2297002, 12217: 2297001, 12221: 2306057, 12222: 2306241, 12225: 2306435}
[2026-05-17 20:46:14] 2026-05-17 18:45:37,214 | INFO     | --------------------------------------------------
[2026-05-17 20:46:14] 2026-05-17 18:45:37,214 | INFO     | 
[2026-05-17 20:46:14] 2026-05-17 18:45:37,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-05-17 20:46:14] 2026-05-17 18:45:37,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,626 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 20:46:14] 2026-05-17 18:45:37,627 | INFO     | job 7134372208 has completed (purged errors)
[2026-05-17 20:46:14] 2026-05-17 18:45:37,627 | INFO     | overall cleanup function is called
[2026-05-17 20:46:14] 2026-05-17 18:45:38,635 | INFO     | --- collectZombieJob: --- 10, [8624]
[2026-05-17 20:46:14] 2026-05-17 18:45:38,636 | INFO     | zombie collector waiting for pid 8624
[2026-05-17 20:46:14] 2026-05-17 18:45:38,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 20:46:14] 2026-05-17 18:45:38,636 | INFO     | collected zombie processes
[2026-05-17 20:46:14] 2026-05-17 18:45:38,636 | INFO     | will attempt to kill all subprocesses of pid=8624
[2026-05-17 20:46:14] 2026-05-17 18:45:38,695 | INFO     | process IDs to be killed: [8624] (in reverse order)
[2026-05-17 20:46:14] 2026-05-17 18:45:39,159 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 20:46:14] 2026-05-17 18:45:39,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 20:46:14] 2026-05-17 18:45:39,162 | INFO     | did not find any defunct processes belonging to 8624
[2026-05-17 20:46:14] 2026-05-17 18:45:39,164 | INFO     | did not find any defunct processes belonging to 8624
[2026-05-17 20:46:14] 2026-05-17 18:45:39,164 | INFO     | Ready for new job
[2026-05-17 20:46:14] 2026-05-17 18:45:39,166 | INFO     | ***************************************
[2026-05-17 20:46:14] 2026-05-17 18:45:39,166 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 20:46:14] 2026-05-17 18:45:39,166 | INFO     | ***************************************
[2026-05-17 20:46:14] 2026-05-17 18:45:39,166 | INFO     | 
[2026-05-17 20:46:14] 2026-05-17 18:45:39,167 | INFO     | pilot is running in a VM
[2026-05-17 20:46:14] 2026-05-17 18:45:39,167 | INFO     | architecture information:
[2026-05-17 20:46:14] 2026-05-17 18:45:39,174 | INFO     | executing command: cat /etc/os-release
[2026-05-17 20:46:14] 2026-05-17 18:45:39,498 | INFO     | cat /etc/os-release:
[2026-05-17 20:46:14] NAME="CentOS Linux"
[2026-05-17 20:46:14] VERSION="7 (Core)"
[2026-05-17 20:46:14] ID="centos"
[2026-05-17 20:46:14] ID_LIKE="rhel fedora"
[2026-05-17 20:46:14] VERSION_ID="7"
[2026-05-17 20:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 20:46:14] ANSI_COLOR="0;31"
[2026-05-17 20:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 20:46:14] HOME_URL="https://www.centos.org/"
[2026-05-17 20:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 20:46:14] 
[2026-05-17 20:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 20:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 20:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 20:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 20:46:14] 
[2026-05-17 20:46:14] 2026-05-17 18:45:39,498 | INFO     | ***************************************
[2026-05-17 20:46:14] 2026-05-17 18:45:40,002 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-05-17 20:46:14] 2026-05-17 18:45:40,233 | INFO     | sufficient remaining disk space (494223228928 B)
[2026-05-17 20:46:14] 2026-05-17 18:45:40,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 20:46:14] 2026-05-17 18:45:40,233 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 20:46:14] 2026-05-17 18:45:40,234 | INFO     | update_server=False
[2026-05-17 20:46:14] 2026-05-17 18:45:40,234 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 20:46:14] 2026-05-17 18:45:40,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 20:46:14] 2026-05-17 18:45:40,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 20:46:14] 2026-05-17 18:45:40,431 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-17 20:46:14] 2026-05-17 18:45:40,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-17 20:46:14] 2026-05-17 18:45:40,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 20:46:14] 2026-05-17 18:45:40,432 | INFO     | will abort loop
[2026-05-17 20:46:14] 2026-05-17 18:45:40,685 | INFO     | all data control threads have been joined
[2026-05-17 20:46:14] 2026-05-17 18:45:40,878 | INFO     | all payload control threads have been joined
[2026-05-17 20:46:14] 2026-05-17 18:45:41,240 | INFO     | [job] retrieve thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:41,287 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:41,438 | INFO     | [job] job monitor thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:41,513 | INFO     | all job control threads have been joined
[2026-05-17 20:46:14] 2026-05-17 18:45:41,692 | INFO     | [data] control thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:41,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 20:46:14] 2026-05-17 18:45:41,885 | INFO     | [payload] control thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:41,917 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,130 | INFO     | [data] copytool_in thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,213 | INFO     | [payload] validate_post thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,356 | INFO     | [job] validate thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,358 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,419 | INFO     | [data] copytool_out thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,519 | INFO     | [job] control thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,693 | INFO     | [payload] failed_post thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:42,759 | INFO     | [job] queue monitor thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:44,242 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:50,437 | INFO     | job.realtimelogging is not enabled
[2026-05-17 20:46:14] 2026-05-17 18:45:51,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 20:46:14] 2026-05-17 18:45:59,898 | INFO     | [monitor] cgroup control has ended
[2026-05-17 20:46:14] 2026-05-17 18:46:01,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218295830336)>', '<ExcThread(monitor, started 140217713415936)>']
[2026-05-17 20:46:14] 2026-05-17 18:46:06,556 | INFO     | all workflow threads have been joined
[2026-05-17 20:46:14] 2026-05-17 18:46:06,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 20:46:14] 2026-05-17 18:46:06,557 | INFO     | traces error code: 0
[2026-05-17 20:46:14] 2026-05-17 18:46:06,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 20:46:14] 2026-05-17 18:46:08,788 | INFO     | PID=4155 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-17 20:46:14] 2026-05-17 18:46:08,788 | INFO     | .. there are 2 such processes running
[2026-05-17 20:46:14] 2026-05-17 18:46:08,793 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 20:46:14] 2026-05-17 18:46:08,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 20:46:14] 2026-05-17 18:46:08,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 20:46:14] 2026-05-17 18:46:08,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 20:46:14] 2026-05-17 18:46:08,794 | CRITICAL | thread 'MainThread' is not alive
[2026-05-17 20:46:14] 2026-05-17 18:46:08,794 | INFO     | [monitor] control thread has ended
[2026-05-17 20:46:14] 2026-05-17 18:46:09,173 [wrapper] ==== pilot stdout END ====
[2026-05-17 20:46:14] 2026-05-17 18:46:09,255 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 20:46:14] 2026-05-17 18:46:09,327 [wrapper] pilotpid: 4155
[2026-05-17 20:46:14] 2026-05-17 18:46:09,390 [wrapper] Pilot exit status: 0
[2026-05-17 20:46:14] 2026-05-17 18:46:09,948 [wrapper] pandaids: 7134372208
[2026-05-17 20:46:14] 2026-05-17 18:46:11,001 [wrapper] cleanup supervisor_pilot 26528 4156
[2026-05-17 20:46:14] 2026-05-17 18:46:11,139 [wrapper] Test setup, not cleaning
[2026-05-17 20:46:14] 2026-05-17 18:46:11,220 [wrapper] apfmon messages muted
[2026-05-17 20:46:14] 2026-05-17 18:46:11,310 [wrapper] ==== wrapper stdout END ====
[2026-05-17 20:46:14] 2026-05-17 18:46:11,429 [wrapper] ==== wrapper stderr END ====
[2026-05-17 20:46:14]  *** Error codes and diagnostics ***
[2026-05-17 20:46:14]     "exeErrorCode": 0,
[2026-05-17 20:46:14]     "pilotErrorCode": 0,
[2026-05-17 20:46:14]  *** Listing of results directory ***
[2026-05-17 20:46:14] total 607896
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc    683926 May  9 16:32 pilot3.tar.gz
[2026-05-17 20:46:14] -rwx------. 1 boinc boinc     36281 May  9 16:32 runpilot2-wrapper.sh
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc      5631 May  9 16:34 queuedata.json
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc       100 May 17 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 20:46:14] -rwxr-xr-x. 1 boinc boinc      7986 May 17 17:14 run_atlas
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc       105 May 17 17:14 job.xml
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc 435255389 May 17 17:14 EVNT.46701437._000506.pool.root.1
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc    697409 May 17 17:14 input.tar.gz
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc      6303 May 17 17:14 init_data.xml
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc     15667 May 17 17:14 start_atlas.sh
[2026-05-17 20:46:14] drwxrwx--x. 2 boinc boinc        68 May 17 17:14 shared
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc         0 May 17 17:14 boinc_lockfile
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc      2545 May 17 17:15 pandaJob.out
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc       415 May 17 17:21 workernode_map.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc    993473 May 17 17:21 agis_schedconf.cvmfs.json
[2026-05-17 20:46:14] drwx------. 5 boinc boinc      4096 May 17 17:21 pilot3
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc 180027498 May 17 20:44 HITS.50087071._044458.pool.root.1
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc       490 May 17 20:44 boinc_task_state.xml
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc      1021 May 17 20:45 memory_monitor_summary.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc   1502367 May 17 20:45 agis_ddmendpoints.agis.ALL.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc    406429 May 17 20:45 log.50087071._044458.job.log.tgz.1
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc      6353 May 17 20:45 heartbeat_new.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc      6244 May 17 20:45 heartbeat.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc        95 May 17 20:46 pilot_heartbeat.json
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc       889 May 17 20:46 pilotlog.txt
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc      8192 May 17 20:46 boinc_mmap_file
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc        28 May 17 20:46 wrapper_checkpoint.txt
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc   1141838 May 17 20:46 log.50087071._044458.job.log.1
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc       357 May 17 20:46 output.list
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc       410 May 17 20:46 runtime_log
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc   1566720 May 17 20:46 result.tar.gz
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc      8455 May 17 20:46 runtime_log.err
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc       656 May 17 20:46 458ba2894c7e.diag
[2026-05-17 20:46:14] -rw-r--r--. 1 boinc boinc     20611 May 17 20:46 stderr.txt
[2026-05-17 20:46:14] HITS file was successfully produced:
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc 180027498 May 17 20:44 shared/HITS.pool.root.1
[2026-05-17 20:46:14]  *** Contents of shared directory: ***
[2026-05-17 20:46:14] total 603100
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc 435255389 May 17 17:14 ATLAS.root_0
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc    697409 May 17 17:14 input.tar.gz
[2026-05-17 20:46:14] -rw-r--r--. 2 boinc boinc     15667 May 17 17:14 start_atlas.sh
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc 180027498 May 17 20:44 HITS.pool.root.1
[2026-05-17 20:46:14] -rw-------. 1 boinc boinc   1566720 May 17 20:46 result.tar.gz
20:46:15 (32569): run_atlas exited; CPU time 50406.201495
20:46:15 (32569): called boinc_finish(0)

</stderr_txt>
]]>

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