Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:11:41 (2419588): wrapper (7.7.26015): starting
17:11:41 (2419588): wrapper: running run_atlas (--nthreads 3)
[2026-05-16 17:11:41] Arguments: --nthreads 3
[2026-05-16 17:11:41] Threads: 3
[2026-05-16 17:11:41] Checking for CVMFS
[2026-05-16 17:11:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 17:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 17:11:43] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 17:11:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 17:11:43] 2.9.2.0 2362216 325 60192 159578 0 50 35487590 36864000 0 130560 0 219689 99.988 14589 20122 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-16 17:11:43] CVMFS is ok
[2026-05-16 17:11:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-16 17:11:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-16 17:11:43] Further information can be found at the LHC@home message board.
[2026-05-16 17:11:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 17:11:43] Checking for apptainer binary...
[2026-05-16 17:11:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 17:11:43] Running /usr/bin/apptainer --version
[2026-05-16 17:11:43] apptainer version 1.4.1-1.1
[2026-05-16 17:11:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 17:11:43] atlasA223b
[2026-05-16 17:11:43] apptainer works
[2026-05-16 17:11:43] Set ATHENA_PROC_NUMBER=3
[2026-05-16 17:11:43] Set ATHENA_CORE_NUMBER=3
[2026-05-16 17:11:43] Starting ATLAS job with PandaID=7138523614
[2026-05-16 17:11:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-16 18:33:06]  *** The last 200 lines of the pilot log: ***
[2026-05-16 18:33:06]  ddmendpoint_alt=None
[2026-05-16 18:33:06]  direct_access_lan=False
[2026-05-16 18:33:06]  direct_access_wan=False
[2026-05-16 18:33:06]  domain=
[2026-05-16 18:33:06]  filesize=260360
[2026-05-16 18:33:06]  filetype=log
[2026-05-16 18:33:06]  guid=a7106fac-3142-44b5-acec-2fa05ec7c6e5
[2026-05-16 18:33:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-16 18:33:06]  is_altstaged=None
[2026-05-16 18:33:06]  is_tar=False
[2026-05-16 18:33:06]  lfn=log.50087078._008243.job.log.tgz.1
[2026-05-16 18:33:06]  mtime=0
[2026-05-16 18:33:06]  protocol_id=None
[2026-05-16 18:33:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-16 18:33:06]  replicas=None
[2026-05-16 18:33:06]  scope=mc23_13p6TeV
[2026-05-16 18:33:06]  status=None
[2026-05-16 18:33:06]  status_code=0
[2026-05-16 18:33:06]  storage_token=
[2026-05-16 18:33:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7138523614/log.50087078._008243.job.log.tgz.1
[2026-05-16 18:33:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/e9/log.50087078._008243.job.log.tgz.1
[2026-05-16 18:33:06]  workdir=None
[2026-05-16 18:33:06] ]
[2026-05-16 18:33:06] 2026-05-16 16:32:05,437 | INFO     | transferring file log.50087078._008243.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7138523614/log.50087078._008243.job.log.tgz.1 to /local/data/boinc/
[2026-05-16 18:33:06] 2026-05-16 16:32:05,437 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7138523614/log.50087078._008243.job.log.tgz.1 /local/data/boinc/slots/0/log.50087078._0082
[2026-05-16 18:33:06] 2026-05-16 16:32:05,451 | INFO     | adding to output.list: log.50087078._008243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/e9/log.50087078._008243.job.log.tg
[2026-05-16 18:33:06] 2026-05-16 16:32:05,452 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-16 18:33:06] 2026-05-16 16:32:05,452 | INFO     | summary of transferred files:
[2026-05-16 18:33:06] 2026-05-16 16:32:05,452 | INFO     |  -- lfn=log.50087078._008243.job.log.tgz.1, status_code=0, status=transferred
[2026-05-16 18:33:06] 2026-05-16 16:32:05,452 | INFO     | stage-out finished correctly
[2026-05-16 18:33:06] 2026-05-16 16:32:05,482 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-16 18:33:06] 2026-05-16 16:32:05,583 | INFO     | monitor loop #372: job 0:7138523614 is in state 'finished'
[2026-05-16 18:33:06] 2026-05-16 16:32:05,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,377 | INFO     | job 7138523614 has state=finished
[2026-05-16 18:33:06] 2026-05-16 16:32:06,377 | INFO     | preparing for final server update for job 7138523614 in state='finished'
[2026-05-16 18:33:06] 2026-05-16 16:32:06,377 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7138523614/jobReport.json
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | this job has now completed (state=finished)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | log transfer has been attempted: DONE
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | job 7138523614 has finished - writing final server update
[2026-05-16 18:33:06] 2026-05-16 16:32:06,379 | INFO     | total number of processed events: 400 (read)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,380 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7138523614/memory_monitor_summary.json (trf name=prmon)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,380 | INFO     | extracted standard info from prmon json
[2026-05-16 18:33:06] 2026-05-16 16:32:06,381 | INFO     | extracted standard memory fields from prmon json
[2026-05-16 18:33:06] 2026-05-16 16:32:06,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-16 18:33:06] 2026-05-16 16:32:06,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-16 18:33:06] 2026-05-16 16:32:06,381 | INFO     | fitting pss+swap vs Time
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | sum of square deviations: 115715658.0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | sum of deviations: 4467398348.500001
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | mean x (centered): 0.0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | mean y: 2330112.347222222
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | intersect: 2330112.347222222
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | chi2: 0.320754811532394
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | current memory leak: 38.61 B/s (using 72 data points, chi2=0.32)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | could have reported an average CPU frequency of 3688 MHz (6 samples)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | ..............................
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . Timing measurements:
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . get job = 0 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . initial setup = 3 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . payload setup = 5 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . stage-in = 0 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,382 | INFO     | . payload execution = 4791 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,383 | INFO     | . stage-out = 0 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,383 | INFO     | . log creation = 0 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,383 | INFO     | ..............................
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | 
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | job summary report
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | --------------------------------------------------
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | PanDA job id: 7138523614
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | task id: 50087078
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | errors: (none)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | pilot state: finished 
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | transexitcode: 0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | exeerrorcode: 0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | exeerrordiag: 
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | exitcode: 0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | exitmsg: OK
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | cpuconsumptiontime: 13168 s
[2026-05-16 18:33:06] 2026-05-16 16:32:06,870 | INFO     | nevents: 400
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | neventsw: 0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | pid: 2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | pgrp: 2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | corecount: 3
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | event service: False
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | sizes: {0: 2267477, 10: 2267477, 4800: 2293867, 4801: 2302927, 4802: 2303065}
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | --------------------------------------------------
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | 
[2026-05-16 18:33:06] 2026-05-16 16:32:06,871 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | job 7138523614 has completed (purged errors)
[2026-05-16 18:33:06] 2026-05-16 16:32:06,888 | INFO     | overall cleanup function is called
[2026-05-16 18:33:06] 2026-05-16 16:32:07,895 | INFO     | --- collectZombieJob: --- 10, [2428056]
[2026-05-16 18:33:06] 2026-05-16 16:32:07,895 | INFO     | zombie collector waiting for pid 2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:07,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-16 18:33:06] 2026-05-16 16:32:07,895 | INFO     | collected zombie processes
[2026-05-16 18:33:06] 2026-05-16 16:32:07,895 | INFO     | will attempt to kill all subprocesses of pid=2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:07,927 | INFO     | process IDs to be killed: [2428056] (in reverse order)
[2026-05-16 18:33:06] 2026-05-16 16:32:07,953 | WARNING  | found no corresponding commands to process id(s)
[2026-05-16 18:33:06] 2026-05-16 16:32:07,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-16 18:33:06] 2026-05-16 16:32:07,954 | INFO     | did not find any defunct processes belonging to 2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:07,955 | INFO     | did not find any defunct processes belonging to 2428056
[2026-05-16 18:33:06] 2026-05-16 16:32:07,956 | INFO     | Ready for new job
[2026-05-16 18:33:06] 2026-05-16 16:32:07,956 | INFO     | ***************************************
[2026-05-16 18:33:06] 2026-05-16 16:32:07,956 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-16 18:33:06] 2026-05-16 16:32:07,956 | INFO     | ***************************************
[2026-05-16 18:33:06] 2026-05-16 16:32:07,956 | INFO     | 
[2026-05-16 18:33:06] 2026-05-16 16:32:07,957 | INFO     | architecture information:
[2026-05-16 18:33:06] 2026-05-16 16:32:07,957 | INFO     | executing command: cat /etc/os-release
[2026-05-16 18:33:06] 2026-05-16 16:32:07,967 | INFO     | cat /etc/os-release:
[2026-05-16 18:33:06] NAME="CentOS Linux"
[2026-05-16 18:33:06] VERSION="7 (Core)"
[2026-05-16 18:33:06] ID="centos"
[2026-05-16 18:33:06] ID_LIKE="rhel fedora"
[2026-05-16 18:33:06] VERSION_ID="7"
[2026-05-16 18:33:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-16 18:33:06] ANSI_COLOR="0;31"
[2026-05-16 18:33:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-16 18:33:06] HOME_URL="https://www.centos.org/"
[2026-05-16 18:33:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-16 18:33:06] 
[2026-05-16 18:33:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-16 18:33:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-16 18:33:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-16 18:33:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-16 18:33:06] 
[2026-05-16 18:33:06] 2026-05-16 16:32:07,967 | INFO     | ***************************************
[2026-05-16 18:33:06] 2026-05-16 16:32:08,470 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-16 18:33:06] 2026-05-16 16:32:08,483 | INFO     | sufficient remaining disk space (369898815488 B)
[2026-05-16 18:33:06] 2026-05-16 16:32:08,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-16 18:33:06] 2026-05-16 16:32:08,484 | INFO     | current server update state: UPDATING_FINAL
[2026-05-16 18:33:06] 2026-05-16 16:32:08,484 | INFO     | update_server=False
[2026-05-16 18:33:06] 2026-05-16 16:32:08,484 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-16 18:33:06] 2026-05-16 16:32:08,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-16 18:33:06] 2026-05-16 16:32:09,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-16 18:33:06] 2026-05-16 16:32:09,093 | INFO     | aborting loop
[2026-05-16 18:33:06] 2026-05-16 16:32:09,308 | INFO     | job.realtimelogging is not enabled
[2026-05-16 18:33:06] 2026-05-16 16:32:09,358 | INFO     | all job control threads have been joined
[2026-05-16 18:33:06] 2026-05-16 16:32:09,459 | INFO     | all data control threads have been joined
[2026-05-16 18:33:06] 2026-05-16 16:32:09,489 | INFO     | [job] retrieve thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:09,636 | INFO     | all payload control threads have been joined
[2026-05-16 18:33:06] 2026-05-16 16:32:09,673 | INFO     | [data] copytool_in thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:09,890 | INFO     | [payload] execute_payloads thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,098 | INFO     | [job] job monitor thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,219 | INFO     | [payload] validate_post thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,364 | INFO     | [job] control thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,381 | INFO     | [payload] failed_post thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,465 | INFO     | [data] control thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,494 | INFO     | [data] copytool_out thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,642 | INFO     | [payload] control thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,950 | INFO     | [job] validate thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,991 | INFO     | [job] create_data_payload thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:10,992 | INFO     | [payload] validate_pre thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:11,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-16 18:33:06] 2026-05-16 16:32:11,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-16 18:33:06] 2026-05-16 16:32:12,430 | INFO     | [job] queue monitor thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:15,524 | INFO     | [data] queue_monitor thread has finished
[2026-05-16 18:33:06] 2026-05-16 16:32:39,517 | INFO     | PID=2423630 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-16 18:33:06] 2026-05-16 16:32:39,518 | INFO     | found 0 job(s) in 20 queues
[2026-05-16 18:33:06] 2026-05-16 16:32:39,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-16 18:33:06] 2026-05-16 16:32:39,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-16 18:33:06] 2026-05-16 16:32:59,302 | INFO     | [monitor] cgroup control has ended
[2026-05-16 18:33:06] 2026-05-16 16:33:00,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058060347200)>', '<ExcThread(monitor, started 140057709098752)>']
[2026-05-16 18:33:06] 2026-05-16 16:33:01,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-16 18:33:06] 2026-05-16 16:33:01,627 | INFO     | [monitor] control thread has ended
[2026-05-16 18:33:06] 2026-05-16 16:33:05,919 | INFO     | all workflow threads have been joined
[2026-05-16 18:33:06] 2026-05-16 16:33:05,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-16 18:33:06] 2026-05-16 16:33:05,919 | INFO     | traces error code: 0
[2026-05-16 18:33:06] 2026-05-16 16:33:05,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-16 18:33:06] 2026-05-16 16:33:05,970 [wrapper] ==== pilot stdout END ====
[2026-05-16 18:33:06] 2026-05-16 16:33:05,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-16 18:33:06] 2026-05-16 16:33:05,975 [wrapper] pilotpid: 2423630
[2026-05-16 18:33:06] 2026-05-16 16:33:05,978 [wrapper] Pilot exit status: 0
[2026-05-16 18:33:06] 2026-05-16 16:33:05,986 [wrapper] pandaids: 7138523614
[2026-05-16 18:33:06] 2026-05-16 16:33:06,003 [wrapper] cleanup supervisor_pilot 2433491 2423631
[2026-05-16 18:33:06] 2026-05-16 16:33:06,006 [wrapper] Test setup, not cleaning
[2026-05-16 18:33:06] 2026-05-16 16:33:06,009 [wrapper] apfmon messages muted
[2026-05-16 18:33:06] 2026-05-16 16:33:06,011 [wrapper] ==== wrapper stdout END ====
[2026-05-16 18:33:06] 2026-05-16 16:33:06,014 [wrapper] ==== wrapper stderr END ====
[2026-05-16 18:33:06]  *** Error codes and diagnostics ***
[2026-05-16 18:33:06]     "exeErrorCode": 0,
[2026-05-16 18:33:06]     "pilotErrorCode": 0,
[2026-05-16 18:33:06]  *** Listing of results directory ***
[2026-05-16 18:33:06] total 617576
[2026-05-16 18:33:06] -rwx------ 1 boinc boinc     36281 May 15 20:10 runpilot2-wrapper.sh
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc    683926 May 16 10:57 pilot3.tar.gz
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc      5631 May 16 11:25 queuedata.json
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc       100 May 16 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-16 18:33:06] -rwxr-xr-x 1 boinc boinc      7986 May 16 17:11 run_atlas
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc       105 May 16 17:11 job.xml
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc 442798438 May 16 17:11 EVNT.46701437._000815.pool.root.1
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc    697428 May 16 17:11 input.tar.gz
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc     15667 May 16 17:11 start_atlas.sh
[2026-05-16 18:33:06] drwxrwx--x 2 boinc boinc      4096 May 16 17:11 shared
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc         0 May 16 17:11 boinc_setup_complete
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc      6363 May 16 17:11 init_data.xml
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc         0 May 16 17:11 boinc_lockfile
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc      2566 May 16 17:11 pandaJob.out
[2026-05-16 18:33:06] -rw------- 1 boinc boinc    993489 May 16 17:11 agis_schedconf.cvmfs.json
[2026-05-16 18:33:06] -rw------- 1 boinc boinc   1502367 May 16 17:11 agis_ddmendpoints.agis.ALL.json
[2026-05-16 18:33:06] -rw------- 1 boinc boinc       418 May 16 17:11 workernode_map.json
[2026-05-16 18:33:06] drwx------ 5 boinc boinc      4096 May 16 17:11 pilot3
[2026-05-16 18:33:06] -rw------- 1 boinc boinc 184011847 May 16 18:31 HITS.50087078._008243.pool.root.1
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc       488 May 16 18:31 boinc_task_state.xml
[2026-05-16 18:33:06] -rw------- 1 boinc boinc      1011 May 16 18:32 memory_monitor_summary.json
[2026-05-16 18:33:06] -rw------- 1 boinc boinc    260360 May 16 18:32 log.50087078._008243.job.log.tgz.1
[2026-05-16 18:33:06] -rw------- 1 boinc boinc      6311 May 16 18:32 heartbeat_new.json
[2026-05-16 18:33:06] -rw------- 1 boinc boinc      6202 May 16 18:32 heartbeat.json
[2026-05-16 18:33:06] -rw------- 1 boinc boinc        95 May 16 18:32 pilot_heartbeat.json
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc      8192 May 16 18:32 boinc_mmap_file
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc        27 May 16 18:32 wrapper_checkpoint.txt
[2026-05-16 18:33:06] -rw------- 1 boinc boinc      4823 May 16 18:33 pilotlog.txt
[2026-05-16 18:33:06] -rw------- 1 boinc boinc    474105 May 16 18:33 log.50087078._008243.job.log.1
[2026-05-16 18:33:06] -rw------- 1 boinc boinc       357 May 16 18:33 output.list
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc       410 May 16 18:33 runtime_log
[2026-05-16 18:33:06] -rw------- 1 boinc boinc    747520 May 16 18:33 result.tar.gz
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc      8539 May 16 18:33 runtime_log.err
[2026-05-16 18:33:06] -rw------- 1 boinc boinc       661 May 16 18:33 618eef55767e.diag
[2026-05-16 18:33:06] -rw-r--r-- 1 boinc boinc     20803 May 16 18:33 stderr.txt
[2026-05-16 18:33:06] HITS file was successfully produced:
[2026-05-16 18:33:06] -rw------- 1 boinc boinc 184011847 May 16 18:31 shared/HITS.pool.root.1
[2026-05-16 18:33:06]  *** Contents of shared directory: ***
[2026-05-16 18:33:06] total 613564
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc 442798438 May 16 17:11 ATLAS.root_0
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc    697428 May 16 17:11 input.tar.gz
[2026-05-16 18:33:06] -rw-r--r-- 2 boinc boinc     15667 May 16 17:11 start_atlas.sh
[2026-05-16 18:33:06] -rw------- 1 boinc boinc 184011847 May 16 18:31 HITS.pool.root.1
[2026-05-16 18:33:06] -rw------- 1 boinc boinc    747520 May 16 18:33 result.tar.gz
18:33:07 (2419588): run_atlas exited; CPU time 13186.895286
18:33:07 (2419588): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN