Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:39 (132543): wrapper (7.7.26015): starting
15:40:39 (132543): wrapper: running run_atlas (--nthreads 12)
[2026-05-16 15:40:39] Arguments: --nthreads 12
[2026-05-16 15:40:39] Threads: 12
[2026-05-16 15:40:39] Checking for CVMFS
[2026-05-16 15:40:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 15:40:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 15:40:39] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 15:40:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 15:40:39] 2.9.2.0 119075 31 48996 159577 0 55 2945166 36864001 0 130560 0 54132 99.969 4137 3064 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-16 15:40:39] CVMFS is ok
[2026-05-16 15:40:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-16 15:40:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-16 15:40:39] Further information can be found at the LHC@home message board.
[2026-05-16 15:40:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 15:40:39] Checking for apptainer binary...
[2026-05-16 15:40:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 15:40:39] Running /usr/bin/apptainer --version
[2026-05-16 15:40:39] apptainer version 1.4.1-1.1
[2026-05-16 15:40:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 15:40:39] thA337b
[2026-05-16 15:40:39] apptainer works
[2026-05-16 15:40:39] Set ATHENA_PROC_NUMBER=12
[2026-05-16 15:40:39] Set ATHENA_CORE_NUMBER=12
[2026-05-16 15:40:39] Starting ATLAS job with PandaID=7138523621
[2026-05-16 15:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-16 16:09:55]  *** The last 200 lines of the pilot log: ***
[2026-05-16 16:09:55]  direct_access_wan=False
[2026-05-16 16:09:55]  domain=
[2026-05-16 16:09:55]  filesize=373981
[2026-05-16 16:09:55]  filetype=log
[2026-05-16 16:09:55]  guid=355d0dac-efc5-4a55-b6f5-405cf62a09ba
[2026-05-16 16:09:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-16 16:09:55]  is_altstaged=None
[2026-05-16 16:09:55]  is_tar=False
[2026-05-16 16:09:55]  lfn=log.50087078._008250.job.log.tgz.1
[2026-05-16 16:09:55]  mtime=0
[2026-05-16 16:09:55]  protocol_id=None
[2026-05-16 16:09:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-16 16:09:55]  replicas=None
[2026-05-16 16:09:55]  scope=mc23_13p6TeV
[2026-05-16 16:09:55]  status=None
[2026-05-16 16:09:55]  status_code=0
[2026-05-16 16:09:55]  storage_token=
[2026-05-16 16:09:55]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7138523621/log.50087078._008250.job.log.tgz.1
[2026-05-16 16:09:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/00/log.50087078._008250.job.log.tgz.1
[2026-05-16 16:09:55]  workdir=None
[2026-05-16 16:09:55] ]
[2026-05-16 16:09:55] 2026-05-16 14:09:06,036 | INFO     | transferring file log.50087078._008250.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7138523621/log.50087078._008250.job.log.tgz.1 to /local/data/boinc/
[2026-05-16 16:09:55] 2026-05-16 14:09:06,036 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7138523621/log.50087078._008250.job.log.tgz.1 /local/data/boinc/slots/0/log.50087078._0082
[2026-05-16 16:09:55] 2026-05-16 14:09:06,046 | INFO     | adding to output.list: log.50087078._008250.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/00/log.50087078._008250.job.log.tg
[2026-05-16 16:09:55] 2026-05-16 14:09:06,046 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-16 16:09:55] 2026-05-16 14:09:06,046 | INFO     | summary of transferred files:
[2026-05-16 16:09:55] 2026-05-16 14:09:06,046 | INFO     |  -- lfn=log.50087078._008250.job.log.tgz.1, status_code=0, status=transferred
[2026-05-16 16:09:55] 2026-05-16 14:09:06,046 | INFO     | stage-out finished correctly
[2026-05-16 16:09:55] 2026-05-16 14:09:07,529 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-16 16:09:55] 2026-05-16 14:09:07,540 | INFO     | monitor loop #135: job 0:7138523621 is in state 'finished'
[2026-05-16 16:09:55] 2026-05-16 14:09:07,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,337 | INFO     | job 7138523621 has state=finished
[2026-05-16 16:09:55] 2026-05-16 14:09:08,337 | INFO     | preparing for final server update for job 7138523621 in state='finished'
[2026-05-16 16:09:55] 2026-05-16 14:09:08,337 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7138523621/jobReport.json
[2026-05-16 16:09:55] 2026-05-16 14:09:08,338 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-05-16 16:09:55] 2026-05-16 14:09:08,339 | INFO     | this job has now completed (state=finished)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,339 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,339 | INFO     | log transfer has been attempted: DONE
[2026-05-16 16:09:55] 2026-05-16 14:09:08,339 | INFO     | job 7138523621 has finished - writing final server update
[2026-05-16 16:09:55] 2026-05-16 14:09:08,339 | INFO     | total number of processed events: 400 (read)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7138523621/memory_monitor_summary.json (trf name=prmon)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | INFO     | extracted standard info from prmon json
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | INFO     | extracted standard memory fields from prmon json
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-16 16:09:55] 2026-05-16 14:09:08,340 | INFO     | fitting pss+swap vs Time
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | sum of square deviations: 2865170.0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | sum of deviations: 972944448.9999999
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | mean x (centered): 0.0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | mean y: 2915408.619047619
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | intersect: 2915408.619047619
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | chi2: 0.31245470464588415
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | current memory leak: 339.58 B/s (using 21 data points, chi2=0.31)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | could have reported an average CPU frequency of 2834 MHz (4 samples)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | ..............................
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . Timing measurements:
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . get job = 0 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . initial setup = 2 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . payload setup = 2 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . stage-in = 0 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . payload execution = 1681 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . stage-out = 0 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | . log creation = 0 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,341 | INFO     | ..............................
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | 
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | job summary report
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | --------------------------------------------------
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | PanDA job id: 7138523621
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | task id: 50087078
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | errors: (none)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | pilot state: finished 
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | transexitcode: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | exeerrorcode: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | exeerrordiag: 
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | exitcode: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | exitmsg: OK
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | cpuconsumptiontime: 15121 s
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | nevents: 400
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | neventsw: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | pid: 141014
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | pgrp: 141014
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | corecount: 12
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | event service: False
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | sizes: {0: 2265675, 1: 2267504, 11: 2267504, 1687: 2292392, 1689: 2301396, 1690: 2301452, 1691: 2301774}
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | --------------------------------------------------
[2026-05-16 16:09:55] 2026-05-16 14:09:08,368 | INFO     | 
[2026-05-16 16:09:55] 2026-05-16 14:09:08,369 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | job 7138523621 has completed (purged errors)
[2026-05-16 16:09:55] 2026-05-16 14:09:08,378 | INFO     | overall cleanup function is called
[2026-05-16 16:09:55] 2026-05-16 14:09:09,385 | INFO     | --- collectZombieJob: --- 10, [141014]
[2026-05-16 16:09:55] 2026-05-16 14:09:09,385 | INFO     | zombie collector waiting for pid 141014
[2026-05-16 16:09:55] 2026-05-16 14:09:09,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-16 16:09:55] 2026-05-16 14:09:09,385 | INFO     | collected zombie processes
[2026-05-16 16:09:55] 2026-05-16 14:09:09,385 | INFO     | will attempt to kill all subprocesses of pid=141014
[2026-05-16 16:09:55] 2026-05-16 14:09:09,402 | INFO     | process IDs to be killed: [141014] (in reverse order)
[2026-05-16 16:09:55] 2026-05-16 14:09:09,417 | WARNING  | found no corresponding commands to process id(s)
[2026-05-16 16:09:55] 2026-05-16 14:09:09,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-16 16:09:55] 2026-05-16 14:09:09,418 | INFO     | did not find any defunct processes belonging to 141014
[2026-05-16 16:09:55] 2026-05-16 14:09:09,419 | INFO     | did not find any defunct processes belonging to 141014
[2026-05-16 16:09:55] 2026-05-16 14:09:09,419 | INFO     | Ready for new job
[2026-05-16 16:09:55] 2026-05-16 14:09:09,420 | INFO     | ***************************************
[2026-05-16 16:09:55] 2026-05-16 14:09:09,420 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-16 16:09:55] 2026-05-16 14:09:09,420 | INFO     | ***************************************
[2026-05-16 16:09:55] 2026-05-16 14:09:09,420 | INFO     | 
[2026-05-16 16:09:55] 2026-05-16 14:09:09,420 | INFO     | architecture information:
[2026-05-16 16:09:55] 2026-05-16 14:09:09,421 | INFO     | executing command: cat /etc/os-release
[2026-05-16 16:09:55] 2026-05-16 14:09:09,427 | INFO     | cat /etc/os-release:
[2026-05-16 16:09:55] NAME="CentOS Linux"
[2026-05-16 16:09:55] VERSION="7 (Core)"
[2026-05-16 16:09:55] ID="centos"
[2026-05-16 16:09:55] ID_LIKE="rhel fedora"
[2026-05-16 16:09:55] VERSION_ID="7"
[2026-05-16 16:09:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-16 16:09:55] ANSI_COLOR="0;31"
[2026-05-16 16:09:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-16 16:09:55] HOME_URL="https://www.centos.org/"
[2026-05-16 16:09:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-16 16:09:55] 
[2026-05-16 16:09:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-16 16:09:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-16 16:09:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-16 16:09:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-16 16:09:55] 
[2026-05-16 16:09:55] 2026-05-16 14:09:09,427 | INFO     | ***************************************
[2026-05-16 16:09:55] 2026-05-16 14:09:09,930 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | INFO     | sufficient remaining disk space (258148925440 B)
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | INFO     | current server update state: UPDATING_FINAL
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | INFO     | update_server=False
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-16 16:09:55] 2026-05-16 14:09:09,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-16 16:09:55] 2026-05-16 14:09:09,960 | INFO     | all job control threads have been joined
[2026-05-16 16:09:55] 2026-05-16 14:09:10,054 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-16 16:09:55] 2026-05-16 14:09:10,054 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-16 16:09:55] 2026-05-16 14:09:10,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-16 16:09:55] 2026-05-16 14:09:10,054 | INFO     | will abort loop
[2026-05-16 16:09:55] 2026-05-16 14:09:10,262 | INFO     | all payload control threads have been joined
[2026-05-16 16:09:55] 2026-05-16 14:09:10,848 | INFO     | all data control threads have been joined
[2026-05-16 16:09:55] 2026-05-16 14:09:10,946 | INFO     | [job] queue monitor thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:10,946 | INFO     | [job] retrieve thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:10,965 | INFO     | [job] control thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,060 | INFO     | [job] job monitor thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,268 | INFO     | [payload] control thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,438 | INFO     | [job] validate thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,496 | INFO     | [payload] execute_payloads thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,607 | INFO     | [payload] failed_post thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,689 | INFO     | [data] copytool_in thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,854 | INFO     | [data] control thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:11,947 | INFO     | [data] copytool_out thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:12,135 | INFO     | [payload] validate_post thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:12,316 | INFO     | [payload] validate_pre thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:12,323 | INFO     | [job] create_data_payload thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:13,948 | INFO     | [data] queue_monitor thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:20,903 | INFO     | job.realtimelogging is not enabled
[2026-05-16 16:09:55] 2026-05-16 14:09:21,909 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-16 16:09:55] 2026-05-16 14:09:39,886 | INFO     | PID=136590 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-16 16:09:55] 2026-05-16 14:09:39,887 | INFO     | found 0 job(s) in 20 queues
[2026-05-16 16:09:55] 2026-05-16 14:09:39,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-16 16:09:55] 2026-05-16 14:09:39,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-16 16:09:55] 2026-05-16 14:09:48,663 | INFO     | [monitor] cgroup control has ended
[2026-05-16 16:09:55] 2026-05-16 14:09:50,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889405941568)>', '<ExcThread(monitor, started 139889056130816)>']
[2026-05-16 16:09:55] 2026-05-16 14:09:50,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-16 16:09:55] 2026-05-16 14:09:50,947 | INFO     | [monitor] control thread has ended
[2026-05-16 16:09:55] 2026-05-16 14:09:55,583 | INFO     | all workflow threads have been joined
[2026-05-16 16:09:55] 2026-05-16 14:09:55,583 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-16 16:09:55] 2026-05-16 14:09:55,583 | INFO     | traces error code: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:55,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-16 16:09:55] 2026-05-16 14:09:55,631 [wrapper] ==== pilot stdout END ====
[2026-05-16 16:09:55] 2026-05-16 14:09:55,633 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-16 16:09:55] 2026-05-16 14:09:55,634 [wrapper] pilotpid: 136590
[2026-05-16 16:09:55] 2026-05-16 14:09:55,636 [wrapper] Pilot exit status: 0
[2026-05-16 16:09:55] 2026-05-16 14:09:55,640 [wrapper] pandaids: 7138523621
[2026-05-16 16:09:55] 2026-05-16 14:09:55,650 [wrapper] cleanup supervisor_pilot  145607 136591
[2026-05-16 16:09:55] 2026-05-16 14:09:55,651 [wrapper] Test setup, not cleaning
[2026-05-16 16:09:55] 2026-05-16 14:09:55,653 [wrapper] apfmon messages muted
[2026-05-16 16:09:55] 2026-05-16 14:09:55,654 [wrapper] ==== wrapper stdout END ====
[2026-05-16 16:09:55] 2026-05-16 14:09:55,655 [wrapper] ==== wrapper stderr END ====
[2026-05-16 16:09:55]  *** Error codes and diagnostics ***
[2026-05-16 16:09:55]     "exeErrorCode": 0,
[2026-05-16 16:09:55]     "pilotErrorCode": 0,
[2026-05-16 16:09:55]  *** Listing of results directory ***
[2026-05-16 16:09:55] total 609332
[2026-05-16 16:09:55] -rwx------ 1 boinc boinc     36281 May 15 20:10 runpilot2-wrapper.sh
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc    683926 May 16 10:57 pilot3.tar.gz
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc      5631 May 16 11:25 queuedata.json
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc       100 May 16 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-16 16:09:55] -rwxr-xr-x 1 boinc boinc      7986 May 16 15:40 run_atlas
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc       105 May 16 15:40 job.xml
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc 442798438 May 16 15:40 EVNT.46701437._000815.pool.root.1
[2026-05-16 16:09:55] drwxrwx--x 2 boinc boinc      4096 May 16 15:40 shared
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc    697431 May 16 15:40 input.tar.gz
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc     15667 May 16 15:40 start_atlas.sh
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc         0 May 16 15:40 boinc_setup_complete
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc      6633 May 16 15:40 init_data.xml
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc         0 May 16 15:40 boinc_lockfile
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc      2565 May 16 15:40 pandaJob.out
[2026-05-16 16:09:55] -rw------- 1 boinc boinc    993489 May 16 15:40 agis_schedconf.cvmfs.json
[2026-05-16 16:09:55] -rw------- 1 boinc boinc   1502367 May 16 15:40 agis_ddmendpoints.agis.ALL.json
[2026-05-16 16:09:55] -rw------- 1 boinc boinc       419 May 16 15:40 workernode_map.json
[2026-05-16 16:09:55] drwx------ 5 boinc boinc      4096 May 16 15:40 pilot3
[2026-05-16 16:09:55] -rw------- 1 boinc boinc 175881935 May 16 16:08 HITS.50087078._008250.pool.root.1
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc       488 May 16 16:08 boinc_task_state.xml
[2026-05-16 16:09:55] -rw------- 1 boinc boinc        95 May 16 16:08 pilot_heartbeat.json
[2026-05-16 16:09:55] -rw------- 1 boinc boinc      1010 May 16 16:09 memory_monitor_summary.json
[2026-05-16 16:09:55] -rw------- 1 boinc boinc    373981 May 16 16:09 log.50087078._008250.job.log.tgz.1
[2026-05-16 16:09:55] -rw------- 1 boinc boinc      6307 May 16 16:09 heartbeat_new.json
[2026-05-16 16:09:55] -rw------- 1 boinc boinc      6198 May 16 16:09 heartbeat.json
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc        27 May 16 16:09 wrapper_checkpoint.txt
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc      8192 May 16 16:09 boinc_mmap_file
[2026-05-16 16:09:55] -rw------- 1 boinc boinc      5008 May 16 16:09 pilotlog.txt
[2026-05-16 16:09:55] -rw------- 1 boinc boinc    201001 May 16 16:09 log.50087078._008250.job.log.1
[2026-05-16 16:09:55] -rw------- 1 boinc boinc       357 May 16 16:09 output.list
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc       410 May 16 16:09 runtime_log
[2026-05-16 16:09:55] -rw------- 1 boinc boinc    593920 May 16 16:09 result.tar.gz
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc      8526 May 16 16:09 runtime_log.err
[2026-05-16 16:09:55] -rw------- 1 boinc boinc       659 May 16 16:09 618e26380392.diag
[2026-05-16 16:09:55] -rw-r--r-- 1 boinc boinc     20955 May 16 16:09 stderr.txt
[2026-05-16 16:09:55] HITS file was successfully produced:
[2026-05-16 16:09:55] -rw------- 1 boinc boinc 175881935 May 16 16:08 shared/HITS.pool.root.1
[2026-05-16 16:09:55]  *** Contents of shared directory: ***
[2026-05-16 16:09:55] total 605472
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc 442798438 May 16 15:40 ATLAS.root_0
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc    697431 May 16 15:40 input.tar.gz
[2026-05-16 16:09:55] -rw-r--r-- 2 boinc boinc     15667 May 16 15:40 start_atlas.sh
[2026-05-16 16:09:55] -rw------- 1 boinc boinc 175881935 May 16 16:08 HITS.pool.root.1
[2026-05-16 16:09:55] -rw------- 1 boinc boinc    593920 May 16 16:09 result.tar.gz
16:09:56 (132543): run_atlas exited; CPU time 15124.476506
16:09:56 (132543): called boinc_finish(0)

</stderr_txt>
]]>

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