Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:35:45 (17457): wrapper (7.7.26015): starting
13:35:45 (17457): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 13:35:45] Arguments: --nthreads 8
[2026-05-17 13:35:45] Threads: 8
[2026-05-17 13:35:45] Checking for CVMFS
[2026-05-17 13:35:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 13:35:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 13:35:48] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 13:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 13:35:50] 2.11.2.0 28445 45770 103312 159605 2 53 12762370 25165824 96 130560 0 20621069 99.903 9533298 16217 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 13:35:50] CVMFS is ok
[2026-05-17 13:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 13:35:50] Checking for apptainer binary...
[2026-05-17 13:35:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 13:35:50] Running /usr/bin/apptainer --version
[2026-05-17 13:35:50] apptainer version 1.3.2-1.el7
[2026-05-17 13:35:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 13:36:22] cg-vwn317.simple-grid.lan
[2026-05-17 13:36:22] apptainer works
[2026-05-17 13:36:22] Set ATHENA_PROC_NUMBER=8
[2026-05-17 13:36:22] Set ATHENA_CORE_NUMBER=8
[2026-05-17 13:36:22] Starting ATLAS job with PandaID=7138507524
[2026-05-17 13:36:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 17:14:28]  *** The last 200 lines of the pilot log: ***
[2026-05-17 17:14:28] 2026-05-17 15:13:26,535 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,535 | INFO     | log transfer has been attempted: DONE
[2026-05-17 17:14:28] 2026-05-17 15:13:26,535 | INFO     | job 7138507524 has finished - writing final server update
[2026-05-17 17:14:28] 2026-05-17 15:13:26,535 | INFO     | total number of processed events: 400 (read)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,538 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7138507524/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,538 | INFO     | extracted standard info from prmon json
[2026-05-17 17:14:28] 2026-05-17 15:13:26,538 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 17:14:28] 2026-05-17 15:13:26,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 17:14:28] 2026-05-17 15:13:26,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 17:14:28] 2026-05-17 15:13:26,543 | INFO     | fitting pss+swap vs Time
[2026-05-17 17:14:28] 2026-05-17 15:13:26,544 | INFO     | sum of square deviations: 2593916542.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,546 | INFO     | sum of deviations: 102930315542.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,546 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,546 | INFO     | mean y: 2382820.4778325125
[2026-05-17 17:14:28] 2026-05-17 15:13:26,546 | INFO     | intersect: 2382820.4778325125
[2026-05-17 17:14:28] 2026-05-17 15:13:26,547 | INFO     | chi2: 8.574445242148276
[2026-05-17 17:14:28] 2026-05-17 15:13:26,547 | INFO     | sum of square deviations: 2406926989.5
[2026-05-17 17:14:28] 2026-05-17 15:13:26,549 | INFO     | sum of deviations: 113451479702.99998
[2026-05-17 17:14:28] 2026-05-17 15:13:26,549 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,549 | INFO     | mean y: 2391183.0707070706
[2026-05-17 17:14:28] 2026-05-17 15:13:26,549 | INFO     | intersect: 2391183.0707070706
[2026-05-17 17:14:28] 2026-05-17 15:13:26,550 | INFO     | chi2: 7.890371637809967
[2026-05-17 17:14:28] 2026-05-17 15:13:26,550 | INFO     | current chi2=7.890371637809967 (change=7.97805088282211 %)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,550 | INFO     | right removable region: 197
[2026-05-17 17:14:28] 2026-05-17 15:13:26,551 | INFO     | sum of square deviations: 2406926989.5
[2026-05-17 17:14:28] 2026-05-17 15:13:26,552 | INFO     | sum of deviations: 32810095467.500008
[2026-05-17 17:14:28] 2026-05-17 15:13:26,552 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,553 | INFO     | mean y: 2439974.590909091
[2026-05-17 17:14:28] 2026-05-17 15:13:26,553 | INFO     | intersect: 2439974.590909091
[2026-05-17 17:14:28] 2026-05-17 15:13:26,553 | INFO     | chi2: 3.3217820519915437
[2026-05-17 17:14:28] 2026-05-17 15:13:26,553 | INFO     | current chi2=3.3217820519915437 (change=61.259510578444235 %)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,554 | INFO     | sum of square deviations: 2229146912.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,555 | INFO     | sum of deviations: -15736235270.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,555 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,556 | INFO     | mean y: 2481507.082901554
[2026-05-17 17:14:28] 2026-05-17 15:13:26,556 | INFO     | intersect: 2481507.082901554
[2026-05-17 17:14:28] 2026-05-17 15:13:26,556 | INFO     | chi2: 0.9524202294860232
[2026-05-17 17:14:28] 2026-05-17 15:13:26,556 | INFO     | current chi2=0.9524202294860232 (change=71.32803373071968 %)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,557 | INFO     | sum of square deviations: 2060343747.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,558 | INFO     | sum of deviations: -21416316516.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,558 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,558 | INFO     | mean y: 2486578.723404255
[2026-05-17 17:14:28] 2026-05-17 15:13:26,559 | INFO     | intersect: 2486578.723404255
[2026-05-17 17:14:28] 2026-05-17 15:13:26,559 | INFO     | chi2: 0.8874553533741828
[2026-05-17 17:14:28] 2026-05-17 15:13:26,559 | INFO     | current chi2=0.8874553533741828 (change=6.821030685887357 %)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,559 | INFO     | left removable region: 15
[2026-05-17 17:14:28] 2026-05-17 15:13:26,560 | INFO     | sum of square deviations: 1869302025.5
[2026-05-17 17:14:28] 2026-05-17 15:13:26,561 | INFO     | sum of deviations: -8648376565.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,561 | INFO     | mean x (centered): 0.0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,562 | INFO     | mean y: 2498490.791208791
[2026-05-17 17:14:28] 2026-05-17 15:13:26,562 | INFO     | intersect: 2498490.791208791
[2026-05-17 17:14:28] 2026-05-17 15:13:26,562 | INFO     | chi2: 0.09281431575537559
[2026-05-17 17:14:28] 2026-05-17 15:13:26,562 | INFO     | current memory leak: -4.63 B/s (using 182 data points, chi2=0.09)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,563 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,563 | INFO     | ..............................
[2026-05-17 17:14:28] 2026-05-17 15:13:26,563 | INFO     | . Timing measurements:
[2026-05-17 17:14:28] 2026-05-17 15:13:26,563 | INFO     | . get job = 0 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,563 | INFO     | . initial setup = 104 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | . payload setup = 165 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | . stage-in = 0 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | . payload execution = 12500 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | . stage-out = 2 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | . log creation = 1 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,564 | INFO     | ..............................
[2026-05-17 17:14:28] 2026-05-17 15:13:26,683 | INFO     | 
[2026-05-17 17:14:28] 2026-05-17 15:13:26,683 | INFO     | job summary report
[2026-05-17 17:14:28] 2026-05-17 15:13:26,683 | INFO     | --------------------------------------------------
[2026-05-17 17:14:28] 2026-05-17 15:13:26,683 | INFO     | PanDA job id: 7138507524
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | task id: 50087083
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | errors: (none)
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | pilot state: finished 
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | transexitcode: 0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | exeerrorcode: 0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | exeerrordiag: 
[2026-05-17 17:14:28] 2026-05-17 15:13:26,684 | INFO     | exitcode: 0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | exitmsg: OK
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | cpuconsumptiontime: 46156 s
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | nevents: 400
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | neventsw: 0
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | pid: 25891
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | pgrp: 25891
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | corecount: 8
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | event service: False
[2026-05-17 17:14:28] 2026-05-17 15:13:26,685 | INFO     | sizes: {0: 2265054, 1: 2265740, 2: 2267569, 13: 2267569, 12669: 2297584, 12673: 2306584, 12675: 2306768, 12678: 2306962}
[2026-05-17 17:14:28] 2026-05-17 15:13:26,686 | INFO     | --------------------------------------------------
[2026-05-17 17:14:28] 2026-05-17 15:13:26,686 | INFO     | 
[2026-05-17 17:14:28] 2026-05-17 15:13:26,686 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-05-17 17:14:28] 2026-05-17 15:13:27,231 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,234 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 17:14:28] 2026-05-17 15:13:27,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,234 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 17:14:28] 2026-05-17 15:13:27,234 | INFO     | job 7138507524 has completed (purged errors)
[2026-05-17 17:14:28] 2026-05-17 15:13:27,234 | INFO     | overall cleanup function is called
[2026-05-17 17:14:28] 2026-05-17 15:13:28,249 | INFO     | --- collectZombieJob: --- 10, [25891]
[2026-05-17 17:14:28] 2026-05-17 15:13:28,250 | INFO     | zombie collector waiting for pid 25891
[2026-05-17 17:14:28] 2026-05-17 15:13:28,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 17:14:28] 2026-05-17 15:13:28,250 | INFO     | collected zombie processes
[2026-05-17 17:14:28] 2026-05-17 15:13:28,250 | INFO     | will attempt to kill all subprocesses of pid=25891
[2026-05-17 17:14:28] 2026-05-17 15:13:28,310 | INFO     | process IDs to be killed: [25891] (in reverse order)
[2026-05-17 17:14:28] 2026-05-17 15:13:28,911 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 17:14:28] 2026-05-17 15:13:28,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 17:14:28] 2026-05-17 15:13:28,913 | INFO     | did not find any defunct processes belonging to 25891
[2026-05-17 17:14:28] 2026-05-17 15:13:28,915 | INFO     | did not find any defunct processes belonging to 25891
[2026-05-17 17:14:28] 2026-05-17 15:13:28,915 | INFO     | Ready for new job
[2026-05-17 17:14:28] 2026-05-17 15:13:28,917 | INFO     | ***************************************
[2026-05-17 17:14:28] 2026-05-17 15:13:28,917 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 17:14:28] 2026-05-17 15:13:28,917 | INFO     | ***************************************
[2026-05-17 17:14:28] 2026-05-17 15:13:28,917 | INFO     | 
[2026-05-17 17:14:28] 2026-05-17 15:13:28,918 | INFO     | pilot is running in a VM
[2026-05-17 17:14:28] 2026-05-17 15:13:28,918 | INFO     | architecture information:
[2026-05-17 17:14:28] 2026-05-17 15:13:28,924 | INFO     | executing command: cat /etc/os-release
[2026-05-17 17:14:28] 2026-05-17 15:13:29,144 | INFO     | cat /etc/os-release:
[2026-05-17 17:14:28] NAME="CentOS Linux"
[2026-05-17 17:14:28] VERSION="7 (Core)"
[2026-05-17 17:14:28] ID="centos"
[2026-05-17 17:14:28] ID_LIKE="rhel fedora"
[2026-05-17 17:14:28] VERSION_ID="7"
[2026-05-17 17:14:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 17:14:28] ANSI_COLOR="0;31"
[2026-05-17 17:14:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 17:14:28] HOME_URL="https://www.centos.org/"
[2026-05-17 17:14:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 17:14:28] 
[2026-05-17 17:14:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 17:14:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 17:14:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 17:14:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 17:14:28] 
[2026-05-17 17:14:28] 2026-05-17 15:13:29,144 | INFO     | ***************************************
[2026-05-17 17:14:28] 2026-05-17 15:13:29,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-05-17 17:14:28] 2026-05-17 15:13:29,837 | INFO     | sufficient remaining disk space (492990103552 B)
[2026-05-17 17:14:28] 2026-05-17 15:13:29,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 17:14:28] 2026-05-17 15:13:29,838 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 17:14:28] 2026-05-17 15:13:29,838 | INFO     | update_server=False
[2026-05-17 17:14:28] 2026-05-17 15:13:29,838 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 17:14:28] 2026-05-17 15:13:29,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 17:14:28] 2026-05-17 15:13:29,839 | INFO     | aborting loop
[2026-05-17 17:14:28] 2026-05-17 15:13:29,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 17:14:28] 2026-05-17 15:13:29,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 17:14:28] 2026-05-17 15:13:29,858 | INFO     | all payload control threads have been joined
[2026-05-17 17:14:28] 2026-05-17 15:13:30,048 | INFO     | all data control threads have been joined
[2026-05-17 17:14:28] 2026-05-17 15:13:30,545 | INFO     | all job control threads have been joined
[2026-05-17 17:14:28] 2026-05-17 15:13:30,844 | INFO     | [job] retrieve thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:30,845 | INFO     | [job] job monitor thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:30,865 | INFO     | [payload] control thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,055 | INFO     | [data] control thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,165 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,208 | INFO     | [data] copytool_in thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,432 | INFO     | [payload] failed_post thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,552 | INFO     | [job] control thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,635 | INFO     | [payload] validate_post thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:31,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 17:14:28] 2026-05-17 15:13:31,846 | INFO     | [data] copytool_out thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:32,093 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:32,094 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:32,186 | INFO     | [job] validate thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:32,708 | INFO     | [job] queue monitor thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:33,848 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:40,092 | INFO     | job.realtimelogging is not enabled
[2026-05-17 17:14:28] 2026-05-17 15:13:41,098 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 17:14:28] 2026-05-17 15:13:58,562 | INFO     | PID=21444 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-17 17:14:28] 2026-05-17 15:13:58,563 | INFO     | .. there are 2 such processes running
[2026-05-17 17:14:28] 2026-05-17 15:13:58,563 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 17:14:28] 2026-05-17 15:13:58,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 17:14:28] 2026-05-17 15:13:58,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 17:14:28] 2026-05-17 15:14:16,949 | INFO     | [monitor] cgroup control has ended
[2026-05-17 17:14:28] 2026-05-17 15:14:18,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184234854208)>', '<ExcThread(monitor, started 140183437571840)>']
[2026-05-17 17:14:28] 2026-05-17 15:14:19,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 17:14:28] 2026-05-17 15:14:19,689 | INFO     | [monitor] control thread has ended
[2026-05-17 17:14:28] 2026-05-17 15:14:23,832 | INFO     | all workflow threads have been joined
[2026-05-17 17:14:28] 2026-05-17 15:14:23,833 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 17:14:28] 2026-05-17 15:14:23,833 | INFO     | traces error code: 0
[2026-05-17 17:14:28] 2026-05-17 15:14:23,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 17:14:28] 2026-05-17 15:14:24,226 [wrapper] ==== pilot stdout END ====
[2026-05-17 17:14:28] 2026-05-17 15:14:24,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 17:14:28] 2026-05-17 15:14:24,502 [wrapper] pilotpid: 21444
[2026-05-17 17:14:28] 2026-05-17 15:14:24,569 [wrapper] Pilot exit status: 0
[2026-05-17 17:14:28] 2026-05-17 15:14:25,041 [wrapper] pandaids: 7138507524
[2026-05-17 17:14:28] 2026-05-17 15:14:26,230 [wrapper] cleanup supervisor_pilot 32434 21445
[2026-05-17 17:14:28] 2026-05-17 15:14:26,334 [wrapper] Test setup, not cleaning
[2026-05-17 17:14:28] 2026-05-17 15:14:26,478 [wrapper] apfmon messages muted
[2026-05-17 17:14:28] 2026-05-17 15:14:26,615 [wrapper] ==== wrapper stdout END ====
[2026-05-17 17:14:28] 2026-05-17 15:14:26,747 [wrapper] ==== wrapper stderr END ====
[2026-05-17 17:14:28]  *** Error codes and diagnostics ***
[2026-05-17 17:14:28]     "exeErrorCode": 0,
[2026-05-17 17:14:28]     "pilotErrorCode": 0,
[2026-05-17 17:14:28]  *** Listing of results directory ***
[2026-05-17 17:14:28] total 1110580
[2026-05-17 17:14:28] -rwx------. 1 boinc boinc     36281 May 15 20:10 runpilot2-wrapper.sh
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc    683926 May 16 10:57 pilot3.tar.gz
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc      5631 May 16 11:25 queuedata.json
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc       100 May 17 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 17:14:28] -rwxr-xr-x. 1 boinc boinc      7986 May 17 13:35 run_atlas
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc       105 May 17 13:35 job.xml
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc 975197574 May 17 13:35 EVNT.46375503._000049.pool.root.1
[2026-05-17 17:14:28] drwxrwx--x. 2 boinc boinc        68 May 17 13:35 shared
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc    697440 May 17 13:35 input.tar.gz
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc      6303 May 17 13:35 init_data.xml
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc     15667 May 17 13:35 start_atlas.sh
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc         0 May 17 13:35 boinc_lockfile
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc      2597 May 17 13:36 pandaJob.out
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc       415 May 17 13:41 workernode_map.json
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc    993473 May 17 13:41 agis_schedconf.cvmfs.json
[2026-05-17 17:14:28] drwx------. 5 boinc boinc      4096 May 17 13:41 pilot3
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc 154766349 May 17 17:11 HITS.50087083._006025.pool.root.1
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc       490 May 17 17:12 boinc_task_state.xml
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc      1011 May 17 17:13 memory_monitor_summary.json
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc        95 May 17 17:13 pilot_heartbeat.json
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc   1502367 May 17 17:13 agis_ddmendpoints.agis.ALL.json
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc    394299 May 17 17:13 log.50087083._006025.job.log.tgz.1
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc      6335 May 17 17:13 heartbeat_new.json
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc      6226 May 17 17:13 heartbeat.json
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc      8192 May 17 17:14 boinc_mmap_file
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc        28 May 17 17:14 wrapper_checkpoint.txt
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc      4956 May 17 17:14 pilotlog.txt
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc   1189281 May 17 17:14 log.50087083._006025.job.log.1
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc       357 May 17 17:14 output.list
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc       410 May 17 17:14 runtime_log
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc   1597440 May 17 17:14 result.tar.gz
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc      8455 May 17 17:14 runtime_log.err
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc       655 May 17 17:14 61aa748a5e20.diag
[2026-05-17 17:14:28] -rw-r--r--. 1 boinc boinc     20627 May 17 17:14 stderr.txt
[2026-05-17 17:14:28] HITS file was successfully produced:
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc 154766349 May 17 17:11 shared/HITS.pool.root.1
[2026-05-17 17:14:28]  *** Contents of shared directory: ***
[2026-05-17 17:14:28] total 1105744
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc 975197574 May 17 13:35 ATLAS.root_0
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc    697440 May 17 13:35 input.tar.gz
[2026-05-17 17:14:28] -rw-r--r--. 2 boinc boinc     15667 May 17 13:35 start_atlas.sh
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc 154766349 May 17 17:11 HITS.pool.root.1
[2026-05-17 17:14:28] -rw-------. 1 boinc boinc   1597440 May 17 17:14 result.tar.gz
17:14:30 (17457): run_atlas exited; CPU time 46275.858300
17:14:30 (17457): called boinc_finish(0)

</stderr_txt>
]]>

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