Name 619d0e0ee7f7_0
Workunit 241364150
Created 16 May 2026, 9:39:43 UTC
Sent 16 May 2026, 10:51:11 UTC
Report deadline 24 May 2026, 10:51:11 UTC
Received 16 May 2026, 17:59:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10907053
Run time 3 hours 46 min 21 sec
CPU time 13 hours 13 min 51 sec
Priority 28
Validate state Valid
Credit 253.34
Device peak FLOPS 20.91 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.50 GB
Peak swap size 14.27 GB
Peak disk usage 2.02 GB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:15 (14606): wrapper (7.7.26015): starting
16:12:15 (14606): wrapper: running run_atlas (--nthreads 8)
[2026-05-16 16:12:15] Arguments: --nthreads 8
[2026-05-16 16:12:15] Threads: 8
[2026-05-16 16:12:15] Checking for CVMFS
[2026-05-16 16:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 16:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 16:12:19] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 16:12:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 16:12:20] 2.11.2.0 8887 44486 124116 159577 1 54 24503838 25165825 96 130560 0 88941163 99.959 18598944 14233 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-16 16:12:20] CVMFS is ok
[2026-05-16 16:12:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 16:12:20] Checking for apptainer binary...
[2026-05-16 16:12:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 16:12:20] Running /usr/bin/apptainer --version
[2026-05-16 16:12:20] apptainer version 1.3.2-1.el7
[2026-05-16 16:12:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 16:12:37] cg-vwn308.simple-grid.lan
[2026-05-16 16:12:37] apptainer works
[2026-05-16 16:12:37] Set ATHENA_PROC_NUMBER=8
[2026-05-16 16:12:37] Set ATHENA_CORE_NUMBER=8
[2026-05-16 16:12:37] Starting ATLAS job with PandaID=7138506707
[2026-05-16 16:12:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-16 19:58:31]  *** The last 200 lines of the pilot log: ***
[2026-05-16 19:58:31] 2026-05-16 17:57:46,418 | INFO     | sum of square deviations: 2830787960.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,419 | INFO     | sum of deviations: 100607209232.00002
[2026-05-16 19:58:31] 2026-05-16 17:57:46,420 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,420 | INFO     | mean y: 2404286.200956938
[2026-05-16 19:58:31] 2026-05-16 17:57:46,420 | INFO     | intersect: 2404286.200956938
[2026-05-16 19:58:31] 2026-05-16 17:57:46,420 | INFO     | chi2: 11.251503136351683
[2026-05-16 19:58:31] 2026-05-16 17:57:46,421 | INFO     | sum of square deviations: 2632440055.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,422 | INFO     | sum of deviations: 112397324825.49998
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | mean y: 2413138.93627451
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | intersect: 2413138.93627451
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | chi2: 10.572679431127527
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | current chi2=10.572679431127527 (change=6.033182384591732 %)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,423 | INFO     | right removable region: 203
[2026-05-16 19:58:31] 2026-05-16 17:57:46,424 | INFO     | sum of square deviations: 2632440055.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,425 | INFO     | sum of deviations: 24394937640.50001
[2026-05-16 19:58:31] 2026-05-16 17:57:46,426 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,426 | INFO     | mean y: 2462889.906862745
[2026-05-16 19:58:31] 2026-05-16 17:57:46,426 | INFO     | intersect: 2462889.906862745
[2026-05-16 19:58:31] 2026-05-16 17:57:46,426 | INFO     | chi2: 5.163649678090761
[2026-05-16 19:58:31] 2026-05-16 17:57:46,426 | INFO     | current chi2=5.163649678090761 (change=54.107023608180036 %)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,427 | INFO     | sum of square deviations: 2443580700.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,428 | INFO     | sum of deviations: -37118555998.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,428 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,428 | INFO     | mean y: 2512484.638190955
[2026-05-16 19:58:31] 2026-05-16 17:57:46,429 | INFO     | intersect: 2512484.638190955
[2026-05-16 19:58:31] 2026-05-16 17:57:46,429 | INFO     | chi2: 1.565048113049323
[2026-05-16 19:58:31] 2026-05-16 17:57:46,429 | INFO     | current chi2=1.565048113049323 (change=69.69104779338956 %)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,430 | INFO     | sum of square deviations: 2263977332.5
[2026-05-16 19:58:31] 2026-05-16 17:57:46,431 | INFO     | sum of deviations: -55417994431.999985
[2026-05-16 19:58:31] 2026-05-16 17:57:46,431 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,431 | INFO     | mean y: 2527865.3917525774
[2026-05-16 19:58:31] 2026-05-16 17:57:46,431 | INFO     | intersect: 2527865.3917525774
[2026-05-16 19:58:31] 2026-05-16 17:57:46,432 | INFO     | chi2: 1.0433143225907953
[2026-05-16 19:58:31] 2026-05-16 17:57:46,432 | INFO     | current chi2=1.0433143225907953 (change=33.33659752108114 %)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,432 | INFO     | sum of square deviations: 2093397390.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,434 | INFO     | sum of deviations: -50333646994.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,434 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,434 | INFO     | mean y: 2523306.798941799
[2026-05-16 19:58:31] 2026-05-16 17:57:46,434 | INFO     | intersect: 2523306.798941799
[2026-05-16 19:58:31] 2026-05-16 17:57:46,435 | INFO     | chi2: 1.0405336403415635
[2026-05-16 19:58:31] 2026-05-16 17:57:46,435 | INFO     | current chi2=1.0405336403415635 (change=0.266523921796328 %)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,435 | INFO     | left removable region: 20
[2026-05-16 19:58:31] 2026-05-16 17:57:46,436 | INFO     | sum of square deviations: 1900284932.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,437 | INFO     | sum of deviations: -36003565301.99999
[2026-05-16 19:58:31] 2026-05-16 17:57:46,437 | INFO     | mean x (centered): 0.0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,437 | INFO     | mean y: 2536561.62295082
[2026-05-16 19:58:31] 2026-05-16 17:57:46,437 | INFO     | intersect: 2536561.62295082
[2026-05-16 19:58:31] 2026-05-16 17:57:46,438 | INFO     | chi2: 0.19308413002804725
[2026-05-16 19:58:31] 2026-05-16 17:57:46,438 | INFO     | current memory leak: -18.95 B/s (using 183 data points, chi2=0.19)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | could have reported an average CPU frequency of 2000 MHz (11 samples)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | ..............................
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . Timing measurements:
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . get job = 0 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . initial setup = 120 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . payload setup = 162 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . stage-in = 0 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,439 | INFO     | . payload execution = 12880 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,440 | INFO     | . stage-out = 8 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,440 | INFO     | . log creation = 1 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,440 | INFO     | ..............................
[2026-05-16 19:58:31] 2026-05-16 17:57:46,553 | INFO     | 
[2026-05-16 19:58:31] 2026-05-16 17:57:46,553 | INFO     | job summary report
[2026-05-16 19:58:31] 2026-05-16 17:57:46,553 | INFO     | --------------------------------------------------
[2026-05-16 19:58:31] 2026-05-16 17:57:46,553 | INFO     | PanDA job id: 7138506707
[2026-05-16 19:58:31] 2026-05-16 17:57:46,553 | INFO     | task id: 50087083
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | errors: (none)
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | pilot state: finished 
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | transexitcode: 0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | exeerrorcode: 0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | exeerrordiag: 
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | exitcode: 0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | exitmsg: OK
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | cpuconsumptiontime: 47427 s
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | nevents: 400
[2026-05-16 19:58:31] 2026-05-16 17:57:46,554 | INFO     | neventsw: 0
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | pid: 23030
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | pgrp: 23030
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | corecount: 8
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | event service: False
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | sizes: {0: 2265657, 1: 2256821, 2: 2267542, 12: 2267570, 13047: 2297697, 13055: 2307017}
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | --------------------------------------------------
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | 
[2026-05-16 19:58:31] 2026-05-16 17:57:46,555 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-16 19:58:31] 2026-05-16 17:57:47,047 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,047 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,047 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | job 7138506707 has completed (purged errors)
[2026-05-16 19:58:31] 2026-05-16 17:57:47,049 | INFO     | overall cleanup function is called
[2026-05-16 19:58:31] 2026-05-16 17:57:47,442 | INFO     | PID=18582 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 19:58:31] 2026-05-16 17:57:47,442 | INFO     | .. there are 2 such processes running
[2026-05-16 19:58:31] 2026-05-16 17:57:48,058 | INFO     | --- collectZombieJob: --- 10, [23030]
[2026-05-16 19:58:31] 2026-05-16 17:57:48,059 | INFO     | zombie collector waiting for pid 23030
[2026-05-16 19:58:31] 2026-05-16 17:57:48,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-16 19:58:31] 2026-05-16 17:57:48,059 | INFO     | collected zombie processes
[2026-05-16 19:58:31] 2026-05-16 17:57:48,059 | INFO     | will attempt to kill all subprocesses of pid=23030
[2026-05-16 19:58:31] 2026-05-16 17:57:48,111 | INFO     | process IDs to be killed: [23030] (in reverse order)
[2026-05-16 19:58:31] 2026-05-16 17:57:49,009 | WARNING  | found no corresponding commands to process id(s)
[2026-05-16 19:58:31] 2026-05-16 17:57:49,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-16 19:58:31] 2026-05-16 17:57:49,012 | INFO     | did not find any defunct processes belonging to 23030
[2026-05-16 19:58:31] 2026-05-16 17:57:49,013 | INFO     | did not find any defunct processes belonging to 23030
[2026-05-16 19:58:32] 2026-05-16 17:57:49,013 | INFO     | Ready for new job
[2026-05-16 19:58:32] 2026-05-16 17:57:49,015 | INFO     | ***************************************
[2026-05-16 19:58:32] 2026-05-16 17:57:49,015 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-16 19:58:32] 2026-05-16 17:57:49,015 | INFO     | ***************************************
[2026-05-16 19:58:32] 2026-05-16 17:57:49,016 | INFO     | 
[2026-05-16 19:58:32] 2026-05-16 17:57:49,016 | INFO     | pilot is running in a VM
[2026-05-16 19:58:32] 2026-05-16 17:57:49,016 | INFO     | architecture information:
[2026-05-16 19:58:32] 2026-05-16 17:57:49,026 | INFO     | executing command: cat /etc/os-release
[2026-05-16 19:58:32] 2026-05-16 17:57:49,377 | INFO     | cat /etc/os-release:
[2026-05-16 19:58:32] NAME="CentOS Linux"
[2026-05-16 19:58:32] VERSION="7 (Core)"
[2026-05-16 19:58:32] ID="centos"
[2026-05-16 19:58:32] ID_LIKE="rhel fedora"
[2026-05-16 19:58:32] VERSION_ID="7"
[2026-05-16 19:58:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-16 19:58:32] ANSI_COLOR="0;31"
[2026-05-16 19:58:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-16 19:58:32] HOME_URL="https://www.centos.org/"
[2026-05-16 19:58:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-16 19:58:32] 
[2026-05-16 19:58:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-16 19:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-16 19:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-16 19:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-16 19:58:32] 
[2026-05-16 19:58:32] 2026-05-16 17:57:49,377 | INFO     | ***************************************
[2026-05-16 19:58:32] 2026-05-16 17:57:49,881 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-16 19:58:32] 2026-05-16 17:57:50,177 | INFO     | sufficient remaining disk space (494634270720 B)
[2026-05-16 19:58:32] 2026-05-16 17:57:50,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-16 19:58:32] 2026-05-16 17:57:50,178 | INFO     | current server update state: UPDATING_FINAL
[2026-05-16 19:58:32] 2026-05-16 17:57:50,178 | INFO     | update_server=False
[2026-05-16 19:58:32] 2026-05-16 17:57:50,178 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-16 19:58:32] 2026-05-16 17:57:50,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-16 19:58:32] 2026-05-16 17:57:50,401 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-16 19:58:32] 2026-05-16 17:57:50,402 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-16 19:58:32] 2026-05-16 17:57:50,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-16 19:58:32] 2026-05-16 17:57:50,402 | INFO     | will abort loop
[2026-05-16 19:58:32] 2026-05-16 17:57:50,759 | INFO     | all payload control threads have been joined
[2026-05-16 19:58:32] 2026-05-16 17:57:51,169 | INFO     | all data control threads have been joined
[2026-05-16 19:58:32] 2026-05-16 17:57:51,184 | INFO     | [job] retrieve thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:51,408 | INFO     | [job] job monitor thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:51,426 | INFO     | [job] validate thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:51,456 | INFO     | all job control threads have been joined
[2026-05-16 19:58:32] 2026-05-16 17:57:51,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-16 19:58:32] 2026-05-16 17:57:51,626 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:51,766 | INFO     | [payload] control thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:51,836 | INFO     | [data] copytool_in thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,028 | INFO     | [payload] validate_post thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,176 | INFO     | [data] control thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,192 | INFO     | [data] copytool_out thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,226 | INFO     | [job] create_data_payload thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-16 19:58:32] 2026-05-16 17:57:52,463 | INFO     | [job] control thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,507 | INFO     | [payload] validate_pre thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,574 | INFO     | [job] queue monitor thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,593 | INFO     | [payload] execute_payloads thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:52,764 | INFO     | [payload] failed_post thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:57:56,426 | INFO     | [data] queue_monitor thread has finished
[2026-05-16 19:58:32] 2026-05-16 17:58:19,601 | INFO     | PID=18582 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 19:58:32] 2026-05-16 17:58:19,601 | INFO     | .. there are 2 such processes running
[2026-05-16 19:58:32] 2026-05-16 17:58:19,601 | INFO     | found 0 job(s) in 20 queues
[2026-05-16 19:58:32] 2026-05-16 17:58:19,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-16 19:58:32] 2026-05-16 17:58:19,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-16 19:58:32] 2026-05-16 17:58:20,492 | INFO     | [monitor] cgroup control has ended
[2026-05-16 19:58:32] 2026-05-16 17:58:22,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302672160576)>', '<ExcThread(monitor, started 140301876324096)>']
[2026-05-16 19:58:32] 2026-05-16 17:58:22,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-16 19:58:32] 2026-05-16 17:58:22,620 | INFO     | [monitor] control thread has ended
[2026-05-16 19:58:32] 2026-05-16 17:58:27,157 | INFO     | all workflow threads have been joined
[2026-05-16 19:58:32] 2026-05-16 17:58:27,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-16 19:58:32] 2026-05-16 17:58:27,158 | INFO     | traces error code: 0
[2026-05-16 19:58:32] 2026-05-16 17:58:27,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-16 19:58:32] 2026-05-16 17:58:27,518 [wrapper] ==== pilot stdout END ====
[2026-05-16 19:58:32] 2026-05-16 17:58:27,572 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-16 19:58:32] 2026-05-16 17:58:27,684 [wrapper] pilotpid: 18582
[2026-05-16 19:58:32] 2026-05-16 17:58:27,754 [wrapper] Pilot exit status: 0
[2026-05-16 19:58:32] 2026-05-16 17:58:28,216 [wrapper] pandaids: 7138506707
[2026-05-16 19:58:32] 2026-05-16 17:58:29,078 [wrapper] cleanup supervisor_pilot 29806 18583
[2026-05-16 19:58:32] 2026-05-16 17:58:29,203 [wrapper] Test setup, not cleaning
[2026-05-16 19:58:32] 2026-05-16 17:58:29,325 [wrapper] apfmon messages muted
[2026-05-16 19:58:32] 2026-05-16 17:58:29,348 [wrapper] ==== wrapper stdout END ====
[2026-05-16 19:58:32] 2026-05-16 17:58:29,411 [wrapper] ==== wrapper stderr END ====
[2026-05-16 19:58:32]  *** Error codes and diagnostics ***
[2026-05-16 19:58:32]     "exeErrorCode": 0,
[2026-05-16 19:58:32]     "pilotErrorCode": 0,
[2026-05-16 19:58:32]  *** Listing of results directory ***
[2026-05-16 19:58:32] total 1136356
[2026-05-16 19:58:32] -rwx------. 1 boinc boinc     36281 May 15 20:10 runpilot2-wrapper.sh
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc    683926 May 16 10:57 pilot3.tar.gz
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc      5631 May 16 11:25 queuedata.json
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc       100 May 16 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-16 19:58:32] -rwxr-xr-x. 1 boinc boinc      7986 May 16 16:12 run_atlas
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc       105 May 16 16:12 job.xml
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc      6303 May 16 16:12 init_data.xml
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc 997543584 May 16 16:12 EVNT.46375503._000046.pool.root.1
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc     15667 May 16 16:12 start_atlas.sh
[2026-05-16 19:58:32] drwxrwx--x. 2 boinc boinc        68 May 16 16:12 shared
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc    697438 May 16 16:12 input.tar.gz
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc         0 May 16 16:12 boinc_lockfile
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc      2598 May 16 16:12 pandaJob.out
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc       413 May 16 16:19 workernode_map.json
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc    993489 May 16 16:19 agis_schedconf.cvmfs.json
[2026-05-16 19:58:32] drwx------. 5 boinc boinc      4096 May 16 16:19 pilot3
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc 158718880 May 16 19:56 HITS.50087083._005658.pool.root.1
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc       490 May 16 19:56 boinc_task_state.xml
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc        95 May 16 19:57 pilot_heartbeat.json
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc      1012 May 16 19:57 memory_monitor_summary.json
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc   1502367 May 16 19:57 agis_ddmendpoints.agis.ALL.json
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc    406419 May 16 19:57 log.50087083._005658.job.log.tgz.1
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc      6342 May 16 19:57 heartbeat_new.json
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc      6233 May 16 19:57 heartbeat.json
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc      8192 May 16 19:58 boinc_mmap_file
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc        28 May 16 19:58 wrapper_checkpoint.txt
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc      5069 May 16 19:58 pilotlog.txt
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc   1221825 May 16 19:58 log.50087083._005658.job.log.1
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc       357 May 16 19:58 output.list
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc       410 May 16 19:58 runtime_log
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc   1648640 May 16 19:58 result.tar.gz
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc      8439 May 16 19:58 runtime_log.err
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc       656 May 16 19:58 619d0e0ee7f7.diag
[2026-05-16 19:58:32] -rw-r--r--. 1 boinc boinc     20596 May 16 19:58 stderr.txt
[2026-05-16 19:58:32] HITS file was successfully produced:
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc 158718880 May 16 19:56 shared/HITS.pool.root.1
[2026-05-16 19:58:32]  *** Contents of shared directory: ***
[2026-05-16 19:58:32] total 1131476
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc 997543584 May 16 16:12 ATLAS.root_0
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc     15667 May 16 16:12 start_atlas.sh
[2026-05-16 19:58:32] -rw-r--r--. 2 boinc boinc    697438 May 16 16:12 input.tar.gz
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc 158718880 May 16 19:56 HITS.pool.root.1
[2026-05-16 19:58:32] -rw-------. 1 boinc boinc   1648640 May 16 19:58 result.tar.gz
19:58:33 (14606): run_atlas exited; CPU time 47553.388353
19:58:33 (14606): called boinc_finish(0)

</stderr_txt>
]]>


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