Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:13:43 (25135): wrapper (7.7.26015): starting
02:13:43 (25135): wrapper: running run_atlas (--nthreads 8)
[2026-05-17 02:13:43] Arguments: --nthreads 8
[2026-05-17 02:13:43] Threads: 8
[2026-05-17 02:13:43] Checking for CVMFS
[2026-05-17 02:13:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-17 02:13:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-17 02:13:46] Running cvmfs_config stat atlas.cern.ch
[2026-05-17 02:13:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-17 02:13:47] 2.11.2.0 28445 45088 102272 159589 1 53 12695005 25165825 96 130560 0 20412549 99.902 9512204 16359 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-17 02:13:47] CVMFS is ok
[2026-05-17 02:13:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-17 02:13:47] Checking for apptainer binary...
[2026-05-17 02:13:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-17 02:13:47] Running /usr/bin/apptainer --version
[2026-05-17 02:13:48] apptainer version 1.3.2-1.el7
[2026-05-17 02:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-17 02:14:07] cg-vwn317.simple-grid.lan
[2026-05-17 02:14:07] apptainer works
[2026-05-17 02:14:07] Set ATHENA_PROC_NUMBER=8
[2026-05-17 02:14:07] Set ATHENA_CORE_NUMBER=8
[2026-05-17 02:14:07] Starting ATLAS job with PandaID=7138542560
[2026-05-17 02:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-17 05:56:20]  *** The last 200 lines of the pilot log: ***
[2026-05-17 05:56:20] 2026-05-17 03:55:42,245 | INFO     | extracted standard memory fields from prmon json
[2026-05-17 05:56:20] 2026-05-17 03:55:42,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-17 05:56:20] 2026-05-17 03:55:42,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-17 05:56:20] 2026-05-17 03:55:42,251 | INFO     | fitting pss+swap vs Time
[2026-05-17 05:56:20] 2026-05-17 03:55:42,251 | INFO     | sum of square deviations: 2790348132.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,257 | INFO     | sum of deviations: 66984317251.50003
[2026-05-17 05:56:20] 2026-05-17 03:55:42,257 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,257 | INFO     | mean y: 2410421.3798076925
[2026-05-17 05:56:20] 2026-05-17 03:55:42,258 | INFO     | intersect: 2410421.3798076925
[2026-05-17 05:56:20] 2026-05-17 03:55:42,258 | INFO     | chi2: 10.029441485042382
[2026-05-17 05:56:20] 2026-05-17 03:55:42,258 | INFO     | sum of square deviations: 2593916542.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,260 | INFO     | sum of deviations: 92808109315.00003
[2026-05-17 05:56:20] 2026-05-17 03:55:42,260 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,261 | INFO     | mean y: 2430157.4236453203
[2026-05-17 05:56:20] 2026-05-17 03:55:42,261 | INFO     | intersect: 2430157.4236453203
[2026-05-17 05:56:20] 2026-05-17 03:55:42,261 | INFO     | chi2: 8.6255145551698
[2026-05-17 05:56:20] 2026-05-17 03:55:42,261 | INFO     | current chi2=8.6255145551698 (change=13.998056940322718 %)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,262 | INFO     | right removable region: 202
[2026-05-17 05:56:20] 2026-05-17 03:55:42,262 | INFO     | sum of square deviations: 2593916542.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,264 | INFO     | sum of deviations: -5203097785.000013
[2026-05-17 05:56:20] 2026-05-17 03:55:42,264 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,264 | INFO     | mean y: 2466428.2709359606
[2026-05-17 05:56:20] 2026-05-17 03:55:42,264 | INFO     | intersect: 2466428.2709359606
[2026-05-17 05:56:20] 2026-05-17 03:55:42,264 | INFO     | chi2: 4.758507750748793
[2026-05-17 05:56:20] 2026-05-17 03:55:42,265 | INFO     | current chi2=4.758507750748793 (change=52.55460877013448 %)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,265 | INFO     | sum of square deviations: 2406926989.5
[2026-05-17 05:56:20] 2026-05-17 03:55:42,267 | INFO     | sum of deviations: -59913822562.5
[2026-05-17 05:56:20] 2026-05-17 03:55:42,267 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,267 | INFO     | mean y: 2510958.0454545454
[2026-05-17 05:56:20] 2026-05-17 03:55:42,267 | INFO     | intersect: 2510958.0454545454
[2026-05-17 05:56:20] 2026-05-17 03:55:42,268 | INFO     | chi2: 1.9382534853734015
[2026-05-17 05:56:20] 2026-05-17 03:55:42,268 | INFO     | current chi2=1.9382534853734015 (change=59.26761945342213 %)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,268 | INFO     | sum of square deviations: 2229146912.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,270 | INFO     | sum of deviations: -65893260180.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,270 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,270 | INFO     | mean y: 2516000.787564767
[2026-05-17 05:56:20] 2026-05-17 03:55:42,270 | INFO     | intersect: 2516000.787564767
[2026-05-17 05:56:20] 2026-05-17 03:55:42,271 | INFO     | chi2: 1.8280094339654576
[2026-05-17 05:56:20] 2026-05-17 03:55:42,271 | INFO     | current chi2=1.8280094339654576 (change=5.687803594311895 %)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,271 | INFO     | left removable region: 15
[2026-05-17 05:56:20] 2026-05-17 03:55:42,271 | INFO     | sum of square deviations: 2027639878.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,273 | INFO     | sum of deviations: -38576767952.000015
[2026-05-17 05:56:20] 2026-05-17 03:55:42,273 | INFO     | mean x (centered): 0.0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,273 | INFO     | mean y: 2540322.946524064
[2026-05-17 05:56:20] 2026-05-17 03:55:42,273 | INFO     | intersect: 2540322.946524064
[2026-05-17 05:56:20] 2026-05-17 03:55:42,274 | INFO     | chi2: 0.18853426878367685
[2026-05-17 05:56:20] 2026-05-17 03:55:42,274 | INFO     | current memory leak: -19.03 B/s (using 187 data points, chi2=0.19)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,274 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | ..............................
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . Timing measurements:
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . get job = 0 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . initial setup = 114 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . payload setup = 170 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . stage-in = 0 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,275 | INFO     | . payload execution = 12766 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,276 | INFO     | . stage-out = 4 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,276 | INFO     | . log creation = 1 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,276 | INFO     | ..............................
[2026-05-17 05:56:20] 2026-05-17 03:55:42,402 | INFO     | 
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | job summary report
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | --------------------------------------------------
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | PanDA job id: 7138542560
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | task id: 50087078
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | errors: (none)
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-17 05:56:20] 2026-05-17 03:55:42,403 | INFO     | pilot state: finished 
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | transexitcode: 0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | exeerrorcode: 0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | exeerrordiag: 
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | exitcode: 0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | exitmsg: OK
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | cpuconsumptiontime: 52934 s
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | nevents: 400
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | neventsw: 0
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | pid: 1193
[2026-05-17 05:56:20] 2026-05-17 03:55:42,404 | INFO     | pgrp: 1193
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | corecount: 8
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | event service: False
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | sizes: {0: 2265015, 1: 2265701, 2: 2267530, 13: 2267530, 12940: 2297630, 12941: 2297629, 12945: 2306869, 12946: 2307007}
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | --------------------------------------------------
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | 
[2026-05-17 05:56:20] 2026-05-17 03:55:42,405 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-05-17 05:56:20] 2026-05-17 03:55:43,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,047 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-17 05:56:20] 2026-05-17 03:55:43,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,047 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-17 05:56:20] 2026-05-17 03:55:43,047 | INFO     | job 7138542560 has completed (purged errors)
[2026-05-17 05:56:20] 2026-05-17 03:55:43,047 | INFO     | overall cleanup function is called
[2026-05-17 05:56:20] 2026-05-17 03:55:43,550 | WARNING  | process 1193 can no longer be monitored (due to stat problems) - aborting
[2026-05-17 05:56:20] 2026-05-17 03:55:43,600 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2026-05-17 05:56:20] 2026-05-17 03:55:43,651 | INFO     | number of running child processes to parent process 1193: 1
[2026-05-17 05:56:20] 2026-05-17 03:55:43,651 | INFO     | maximum number of monitored processes: 8
[2026-05-17 05:56:20] 2026-05-17 03:55:43,651 | INFO     | aborting job monitoring since job object (job id=7138542560) has expired
[2026-05-17 05:56:20] 2026-05-17 03:55:44,056 | INFO     | --- collectZombieJob: --- 10, [1193]
[2026-05-17 05:56:20] 2026-05-17 03:55:44,057 | INFO     | zombie collector waiting for pid 1193
[2026-05-17 05:56:20] 2026-05-17 03:55:44,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-17 05:56:20] 2026-05-17 03:55:44,057 | INFO     | collected zombie processes
[2026-05-17 05:56:20] 2026-05-17 03:55:44,057 | INFO     | will attempt to kill all subprocesses of pid=1193
[2026-05-17 05:56:20] 2026-05-17 03:55:44,123 | INFO     | process IDs to be killed: [1193] (in reverse order)
[2026-05-17 05:56:20] 2026-05-17 03:55:44,817 | WARNING  | found no corresponding commands to process id(s)
[2026-05-17 05:56:20] 2026-05-17 03:55:44,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-17 05:56:20] 2026-05-17 03:55:44,819 | INFO     | did not find any defunct processes belonging to 1193
[2026-05-17 05:56:20] 2026-05-17 03:55:44,821 | INFO     | did not find any defunct processes belonging to 1193
[2026-05-17 05:56:20] 2026-05-17 03:55:44,821 | INFO     | Ready for new job
[2026-05-17 05:56:20] 2026-05-17 03:55:44,823 | INFO     | ***************************************
[2026-05-17 05:56:20] 2026-05-17 03:55:44,823 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-17 05:56:20] 2026-05-17 03:55:44,823 | INFO     | ***************************************
[2026-05-17 05:56:20] 2026-05-17 03:55:44,823 | INFO     | 
[2026-05-17 05:56:20] 2026-05-17 03:55:44,824 | INFO     | pilot is running in a VM
[2026-05-17 05:56:20] 2026-05-17 03:55:44,824 | INFO     | architecture information:
[2026-05-17 05:56:20] 2026-05-17 03:55:44,824 | INFO     | executing command: cat /etc/os-release
[2026-05-17 05:56:20] 2026-05-17 03:55:45,133 | INFO     | cat /etc/os-release:
[2026-05-17 05:56:20] NAME="CentOS Linux"
[2026-05-17 05:56:20] VERSION="7 (Core)"
[2026-05-17 05:56:20] ID="centos"
[2026-05-17 05:56:20] ID_LIKE="rhel fedora"
[2026-05-17 05:56:20] VERSION_ID="7"
[2026-05-17 05:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-17 05:56:20] ANSI_COLOR="0;31"
[2026-05-17 05:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-17 05:56:20] HOME_URL="https://www.centos.org/"
[2026-05-17 05:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-17 05:56:20] 
[2026-05-17 05:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-17 05:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-17 05:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-17 05:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-17 05:56:20] 
[2026-05-17 05:56:20] 2026-05-17 03:55:45,133 | INFO     | ***************************************
[2026-05-17 05:56:20] 2026-05-17 03:55:45,638 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-05-17 05:56:20] 2026-05-17 03:55:45,881 | INFO     | sufficient remaining disk space (493722009600 B)
[2026-05-17 05:56:20] 2026-05-17 03:55:45,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-17 05:56:20] 2026-05-17 03:55:45,882 | INFO     | current server update state: UPDATING_FINAL
[2026-05-17 05:56:20] 2026-05-17 03:55:45,882 | INFO     | update_server=False
[2026-05-17 05:56:20] 2026-05-17 03:55:45,882 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-17 05:56:20] 2026-05-17 03:55:46,157 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-17 05:56:20] 2026-05-17 03:55:46,158 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-17 05:56:20] 2026-05-17 03:55:46,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-17 05:56:20] 2026-05-17 03:55:46,158 | INFO     | will abort loop
[2026-05-17 05:56:20] 2026-05-17 03:55:46,254 | INFO     | all data control threads have been joined
[2026-05-17 05:56:20] 2026-05-17 03:55:46,416 | INFO     | all job control threads have been joined
[2026-05-17 05:56:20] 2026-05-17 03:55:46,482 | INFO     | all payload control threads have been joined
[2026-05-17 05:56:20] 2026-05-17 03:55:46,889 | INFO     | [job] retrieve thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-17 05:56:20] 2026-05-17 03:55:47,158 | INFO     | [job] create_data_payload thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,163 | INFO     | [job] job monitor thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,231 | INFO     | [payload] execute_payloads thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,261 | INFO     | [data] control thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-17 05:56:20] 2026-05-17 03:55:47,423 | INFO     | [job] control thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,489 | INFO     | [payload] control thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,576 | INFO     | [data] copytool_in thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:47,963 | INFO     | [payload] validate_post thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:48,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-17 05:56:20] 2026-05-17 03:55:48,270 | INFO     | [payload] validate_pre thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:48,288 | INFO     | [job] validate thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:48,320 | INFO     | [payload] failed_post thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:48,422 | INFO     | [job] queue monitor thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:49,070 | INFO     | [data] copytool_out thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:55:52,199 | INFO     | [data] queue_monitor thread has finished
[2026-05-17 05:56:20] 2026-05-17 03:56:05,232 | INFO     | [monitor] cgroup control has ended
[2026-05-17 05:56:20] 2026-05-17 03:56:06,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114062571328)>', '<ExcThread(monitor, started 140113476564736)>']
[2026-05-17 05:56:20] 2026-05-17 03:56:11,890 | INFO     | all workflow threads have been joined
[2026-05-17 05:56:20] 2026-05-17 03:56:11,891 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-17 05:56:20] 2026-05-17 03:56:11,891 | INFO     | traces error code: 0
[2026-05-17 05:56:20] 2026-05-17 03:56:11,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-17 05:56:20] 2026-05-17 03:56:15,804 | INFO     | PID=29148 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-17 05:56:20] 2026-05-17 03:56:15,804 | INFO     | .. there are 2 such processes running
[2026-05-17 05:56:20] 2026-05-17 03:56:15,812 | INFO     | found 0 job(s) in 20 queues
[2026-05-17 05:56:20] 2026-05-17 03:56:15,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-17 05:56:20] 2026-05-17 03:56:15,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-17 05:56:20] 2026-05-17 03:56:15,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-17 05:56:20] 2026-05-17 03:56:15,813 | INFO     | [monitor] control thread has ended
[2026-05-17 05:56:20] 2026-05-17 03:56:16,334 [wrapper] ==== pilot stdout END ====
[2026-05-17 05:56:20] 2026-05-17 03:56:16,425 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-17 05:56:20] 2026-05-17 03:56:16,535 [wrapper] pilotpid: 29148
[2026-05-17 05:56:20] 2026-05-17 03:56:16,635 [wrapper] Pilot exit status: 0
[2026-05-17 05:56:20] 2026-05-17 03:56:17,126 [wrapper] pandaids: 7138542560
[2026-05-17 05:56:20] 2026-05-17 03:56:18,092 [wrapper] cleanup supervisor_pilot 18850 29149
[2026-05-17 05:56:20] 2026-05-17 03:56:18,150 [wrapper] Test setup, not cleaning
[2026-05-17 05:56:20] 2026-05-17 03:56:18,254 [wrapper] apfmon messages muted
[2026-05-17 05:56:20] 2026-05-17 03:56:18,340 [wrapper] ==== wrapper stdout END ====
[2026-05-17 05:56:20] 2026-05-17 03:56:18,451 [wrapper] ==== wrapper stderr END ====
[2026-05-17 05:56:20]  *** Error codes and diagnostics ***
[2026-05-17 05:56:20]     "exeErrorCode": 0,
[2026-05-17 05:56:20]     "pilotErrorCode": 0,
[2026-05-17 05:56:20]  *** Listing of results directory ***
[2026-05-17 05:56:20] total 620564
[2026-05-17 05:56:20] -rwx------. 1 boinc boinc     36281 May 15 20:10 runpilot2-wrapper.sh
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc    683926 May 16 10:57 pilot3.tar.gz
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc      5631 May 16 11:25 queuedata.json
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc       100 May 17 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-17 05:56:20] -rwxr-xr-x. 1 boinc boinc      7986 May 17 02:13 run_atlas
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc       105 May 17 02:13 job.xml
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc      6301 May 17 02:13 init_data.xml
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc 439353998 May 17 02:13 EVNT.46701437._000826.pool.root.1
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc     15667 May 17 02:13 start_atlas.sh
[2026-05-17 05:56:20] drwxrwx--x. 2 boinc boinc        68 May 17 02:13 shared
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc    697432 May 17 02:13 input.tar.gz
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc         0 May 17 02:13 boinc_lockfile
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc      2565 May 17 02:14 pandaJob.out
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc       415 May 17 02:19 workernode_map.json
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc    993489 May 17 02:19 agis_schedconf.cvmfs.json
[2026-05-17 05:56:20] drwx------. 5 boinc boinc      4096 May 17 02:19 pilot3
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc 188755816 May 17 05:54 HITS.50087078._008785.pool.root.1
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc       490 May 17 05:54 boinc_task_state.xml
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc      1023 May 17 05:55 memory_monitor_summary.json
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc   1502367 May 17 05:55 agis_ddmendpoints.agis.ALL.json
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc    410116 May 17 05:55 log.50087078._008785.job.log.tgz.1
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc      6369 May 17 05:55 heartbeat_new.json
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc      6260 May 17 05:55 heartbeat.json
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc      8192 May 17 05:56 boinc_mmap_file
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc        28 May 17 05:56 wrapper_checkpoint.txt
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc        95 May 17 05:56 pilot_heartbeat.json
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc       820 May 17 05:56 pilotlog.txt
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc   1212571 May 17 05:56 log.50087078._008785.job.log.1
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc       357 May 17 05:56 output.list
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc       410 May 17 05:56 runtime_log
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc   1638400 May 17 05:56 result.tar.gz
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc      8455 May 17 05:56 runtime_log.err
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc       656 May 17 05:56 619db8d96652.diag
[2026-05-17 05:56:20] -rw-r--r--. 1 boinc boinc     20672 May 17 05:56 stderr.txt
[2026-05-17 05:56:20] HITS file was successfully produced:
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc 188755816 May 17 05:54 shared/HITS.pool.root.1
[2026-05-17 05:56:20]  *** Contents of shared directory: ***
[2026-05-17 05:56:20] total 615692
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc 439353998 May 17 02:13 ATLAS.root_0
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc     15667 May 17 02:13 start_atlas.sh
[2026-05-17 05:56:20] -rw-r--r--. 2 boinc boinc    697432 May 17 02:13 input.tar.gz
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc 188755816 May 17 05:54 HITS.pool.root.1
[2026-05-17 05:56:20] -rw-------. 1 boinc boinc   1638400 May 17 05:56 result.tar.gz
05:56:22 (25135): run_atlas exited; CPU time 53051.687471
05:56:22 (25135): called boinc_finish(0)

</stderr_txt>
]]>

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