Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:20 (14096): wrapper (7.7.26015): starting
05:17:20 (14096): wrapper: running run_atlas (--nthreads 8)
[2026-05-16 05:17:20] Arguments: --nthreads 8
[2026-05-16 05:17:20] Threads: 8
[2026-05-16 05:17:20] Checking for CVMFS
[2026-05-16 05:17:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-16 05:17:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-16 05:17:21] Running cvmfs_config stat atlas.cern.ch
[2026-05-16 05:17:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-16 05:17:21] 2.11.2.0 2837 91915 79008 159567 0 1 11080146 20275201 1 130560 0 20643933 99.871 4460188 22405 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-16 05:17:21] CVMFS is ok
[2026-05-16 05:17:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-16 05:17:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-16 05:17:21] Further information can be found at the LHC@home message board.
[2026-05-16 05:17:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-16 05:17:21] Checking for apptainer binary...
[2026-05-16 05:17:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-16 05:17:21] Running /usr/bin/apptainer --version
[2026-05-16 05:17:21] apptainer version 1.3.2-1.el7
[2026-05-16 05:17:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-16 05:17:23] c-204-21.aglt2.org
[2026-05-16 05:17:23] apptainer works
[2026-05-16 05:17:23] Set ATHENA_PROC_NUMBER=8
[2026-05-16 05:17:23] Set ATHENA_CORE_NUMBER=8
[2026-05-16 05:17:23] Starting ATLAS job with PandaID=7138291416
[2026-05-16 05:17:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-16 07:04:25]  *** The last 200 lines of the pilot log: ***
[2026-05-16 07:04:25] 2026-05-16 11:03:52,807 | INFO     | this job has now completed (state=finished)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,808 | INFO     | log transfer has been attempted: DONE
[2026-05-16 07:04:25] 2026-05-16 11:03:52,808 | INFO     | job 7138291416 has finished - writing final server update
[2026-05-16 07:04:25] 2026-05-16 11:03:52,809 | INFO     | total number of processed events: 400 (read)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,812 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7138291416/memory_monitor_summary.json (trf name=prmon)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,812 | INFO     | extracted standard info from prmon json
[2026-05-16 07:04:25] 2026-05-16 11:03:52,813 | INFO     | extracted standard memory fields from prmon json
[2026-05-16 07:04:25] 2026-05-16 11:03:52,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-16 07:04:25] 2026-05-16 11:03:52,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-16 07:04:25] 2026-05-16 11:03:52,816 | INFO     | fitting pss+swap vs Time
[2026-05-16 07:04:25] 2026-05-16 11:03:52,816 | INFO     | sum of square deviations: 348769330.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,817 | INFO     | sum of deviations: 12582829534.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,817 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,817 | INFO     | mean y: 2462728.019230769
[2026-05-16 07:04:25] 2026-05-16 11:03:52,817 | INFO     | intersect: 2462728.019230769
[2026-05-16 07:04:25] 2026-05-16 11:03:52,818 | INFO     | chi2: 1.498144936110454
[2026-05-16 07:04:25] 2026-05-16 11:03:52,818 | INFO     | sum of square deviations: 300842850.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,818 | INFO     | sum of deviations: 12162391974.999998
[2026-05-16 07:04:25] 2026-05-16 11:03:52,819 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,819 | INFO     | mean y: 2461389.3535353537
[2026-05-16 07:04:25] 2026-05-16 11:03:52,819 | INFO     | intersect: 2461389.3535353537
[2026-05-16 07:04:25] 2026-05-16 11:03:52,819 | INFO     | chi2: 1.5003735247780525
[2026-05-16 07:04:25] 2026-05-16 11:03:52,819 | INFO     | current chi2=1.5003735247780525 (change=-0.1487565464383251 %)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,820 | INFO     | right removable region: 98
[2026-05-16 07:04:25] 2026-05-16 11:03:52,820 | INFO     | sum of square deviations: 300842850.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,821 | INFO     | sum of deviations: -3226713523.0000024
[2026-05-16 07:04:25] 2026-05-16 11:03:52,821 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,821 | INFO     | mean y: 2512014.0808080807
[2026-05-16 07:04:25] 2026-05-16 11:03:52,821 | INFO     | intersect: 2512014.0808080807
[2026-05-16 07:04:25] 2026-05-16 11:03:52,821 | INFO     | chi2: 0.029588304784955815
[2026-05-16 07:04:25] 2026-05-16 11:03:52,822 | INFO     | current chi2=0.029588304784955815 (change=98.02500385164507 %)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,822 | INFO     | sum of square deviations: 257521107.5
[2026-05-16 07:04:25] 2026-05-16 11:03:52,822 | INFO     | sum of deviations: -4434357759.500001
[2026-05-16 07:04:25] 2026-05-16 11:03:52,823 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,823 | INFO     | mean y: 2516120.287234043
[2026-05-16 07:04:25] 2026-05-16 11:03:52,823 | INFO     | intersect: 2516120.287234043
[2026-05-16 07:04:25] 2026-05-16 11:03:52,823 | INFO     | chi2: 0.006758433624049497
[2026-05-16 07:04:25] 2026-05-16 11:03:52,823 | INFO     | current chi2=0.006758433624049497 (change=77.15842907132068 %)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,824 | INFO     | sum of square deviations: 218571540.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,824 | INFO     | sum of deviations: -4022743576.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,824 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,825 | INFO     | mean y: 2514493.438202247
[2026-05-16 07:04:25] 2026-05-16 11:03:52,825 | INFO     | intersect: 2514493.438202247
[2026-05-16 07:04:25] 2026-05-16 11:03:52,825 | INFO     | chi2: 0.006383229478426286
[2026-05-16 07:04:25] 2026-05-16 11:03:52,825 | INFO     | current chi2=0.006383229478426286 (change=5.551643568534411 %)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,826 | INFO     | left removable region: 15
[2026-05-16 07:04:25] 2026-05-16 11:03:52,826 | INFO     | sum of square deviations: 177275882.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,826 | INFO     | sum of deviations: -3609813348.0000005
[2026-05-16 07:04:25] 2026-05-16 11:03:52,826 | INFO     | mean x (centered): 0.0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,827 | INFO     | mean y: 2516326.891566265
[2026-05-16 07:04:25] 2026-05-16 11:03:52,827 | INFO     | intersect: 2516326.891566265
[2026-05-16 07:04:25] 2026-05-16 11:03:52,827 | INFO     | chi2: 0.005809653669805986
[2026-05-16 07:04:25] 2026-05-16 11:03:52,827 | INFO     | current memory leak: -20.36 B/s (using 83 data points, chi2=0.01)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,828 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,828 | INFO     | ..............................
[2026-05-16 07:04:25] 2026-05-16 11:03:52,828 | INFO     | . Timing measurements:
[2026-05-16 07:04:25] 2026-05-16 11:03:52,829 | INFO     | . get job = 0 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,829 | INFO     | . initial setup = 8 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,829 | INFO     | . payload setup = 19 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,829 | INFO     | . stage-in = 0 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,829 | INFO     | . payload execution = 6323 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,830 | INFO     | . stage-out = 0 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,830 | INFO     | . log creation = 0 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,830 | INFO     | ..............................
[2026-05-16 07:04:25] 2026-05-16 11:03:52,916 | INFO     | 
[2026-05-16 07:04:25] 2026-05-16 11:03:52,916 | INFO     | job summary report
[2026-05-16 07:04:25] 2026-05-16 11:03:52,916 | INFO     | --------------------------------------------------
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | PanDA job id: 7138291416
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | task id: 50087083
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | errors: (none)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | pilot state: finished 
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | transexitcode: 0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | exeerrorcode: 0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,917 | INFO     | exeerrordiag: 
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | exitcode: 0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | exitmsg: OK
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | cpuconsumptiontime: 46801 s
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | nevents: 400
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | neventsw: 0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | pid: 22678
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | pgrp: 22678
[2026-05-16 07:04:25] 2026-05-16 11:03:52,918 | INFO     | corecount: 8
[2026-05-16 07:04:25] 2026-05-16 11:03:52,919 | INFO     | event service: False
[2026-05-16 07:04:25] 2026-05-16 11:03:52,919 | INFO     | sizes: {0: 2265712, 1: 2267541, 11: 2267541, 6346: 2294634, 6347: 2303688, 6350: 2303826}
[2026-05-16 07:04:25] 2026-05-16 11:03:52,919 | INFO     | --------------------------------------------------
[2026-05-16 07:04:25] 2026-05-16 11:03:52,919 | INFO     | 
[2026-05-16 07:04:25] 2026-05-16 11:03:52,919 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-16 07:04:25] 2026-05-16 11:03:52,948 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,948 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,948 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,948 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,951 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-16 07:04:25] 2026-05-16 11:03:52,952 | INFO     | job 7138291416 has completed (purged errors)
[2026-05-16 07:04:25] 2026-05-16 11:03:52,952 | INFO     | overall cleanup function is called
[2026-05-16 07:04:25] 2026-05-16 11:03:52,987 | INFO     | PID=18219 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 07:04:25] 2026-05-16 11:03:53,962 | INFO     | --- collectZombieJob: --- 10, [22678]
[2026-05-16 07:04:25] 2026-05-16 11:03:53,963 | INFO     | zombie collector waiting for pid 22678
[2026-05-16 07:04:25] 2026-05-16 11:03:53,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-16 07:04:25] 2026-05-16 11:03:53,963 | INFO     | collected zombie processes
[2026-05-16 07:04:25] 2026-05-16 11:03:53,963 | INFO     | will attempt to kill all subprocesses of pid=22678
[2026-05-16 07:04:25] 2026-05-16 11:03:54,038 | INFO     | process IDs to be killed: [22678] (in reverse order)
[2026-05-16 07:04:25] 2026-05-16 11:03:54,094 | WARNING  | found no corresponding commands to process id(s)
[2026-05-16 07:04:25] 2026-05-16 11:03:54,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-16 07:04:25] 2026-05-16 11:03:54,099 | INFO     | did not find any defunct processes belonging to 22678
[2026-05-16 07:04:25] 2026-05-16 11:03:54,103 | INFO     | did not find any defunct processes belonging to 22678
[2026-05-16 07:04:25] 2026-05-16 11:03:54,103 | INFO     | Ready for new job
[2026-05-16 07:04:25] 2026-05-16 11:03:54,105 | INFO     | ***************************************
[2026-05-16 07:04:25] 2026-05-16 11:03:54,105 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-16 07:04:25] 2026-05-16 11:03:54,105 | INFO     | ***************************************
[2026-05-16 07:04:25] 2026-05-16 11:03:54,105 | INFO     | 
[2026-05-16 07:04:25] 2026-05-16 11:03:54,105 | INFO     | architecture information:
[2026-05-16 07:04:25] 2026-05-16 11:03:54,106 | INFO     | executing command: cat /etc/os-release
[2026-05-16 07:04:25] 2026-05-16 11:03:54,125 | INFO     | cat /etc/os-release:
[2026-05-16 07:04:25] NAME="CentOS Linux"
[2026-05-16 07:04:25] VERSION="7 (Core)"
[2026-05-16 07:04:25] ID="centos"
[2026-05-16 07:04:25] ID_LIKE="rhel fedora"
[2026-05-16 07:04:25] VERSION_ID="7"
[2026-05-16 07:04:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-16 07:04:25] ANSI_COLOR="0;31"
[2026-05-16 07:04:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-16 07:04:25] HOME_URL="https://www.centos.org/"
[2026-05-16 07:04:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-16 07:04:25] 
[2026-05-16 07:04:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-16 07:04:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-16 07:04:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-16 07:04:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-16 07:04:25] 
[2026-05-16 07:04:25] 2026-05-16 11:03:54,125 | INFO     | ***************************************
[2026-05-16 07:04:25] 2026-05-16 11:03:54,629 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-16 07:04:25] 2026-05-16 11:03:54,648 | INFO     | sufficient remaining disk space (16994271232 B)
[2026-05-16 07:04:25] 2026-05-16 11:03:54,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-16 07:04:25] 2026-05-16 11:03:54,649 | INFO     | current server update state: UPDATING_FINAL
[2026-05-16 07:04:25] 2026-05-16 11:03:54,649 | INFO     | update_server=False
[2026-05-16 07:04:25] 2026-05-16 11:03:54,649 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-16 07:04:25] 2026-05-16 11:03:54,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-16 07:04:25] 2026-05-16 11:03:55,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-16 07:04:25] 2026-05-16 11:03:55,029 | INFO     | aborting loop
[2026-05-16 07:04:25] 2026-05-16 11:03:55,466 | INFO     | all data control threads have been joined
[2026-05-16 07:04:25] 2026-05-16 11:03:55,655 | INFO     | [job] retrieve thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:55,656 | INFO     | [job] queue monitor thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:55,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-16 07:04:25] 2026-05-16 11:03:55,838 | INFO     | [payload] validate_pre thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:55,870 | INFO     | all payload control threads have been joined
[2026-05-16 07:04:25] 2026-05-16 11:03:56,034 | INFO     | [job] job monitor thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,227 | INFO     | all job control threads have been joined
[2026-05-16 07:04:25] 2026-05-16 11:03:56,242 | INFO     | [job] validate thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,245 | INFO     | [payload] execute_payloads thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-16 07:04:25] 2026-05-16 11:03:56,471 | INFO     | [data] control thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,729 | INFO     | [payload] validate_post thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,821 | INFO     | [payload] failed_post thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:56,875 | INFO     | [payload] control thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:57,077 | INFO     | [job] create_data_payload thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:57,099 | INFO     | [data] copytool_in thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:57,233 | INFO     | [job] control thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:03:57,775 | INFO     | [data] copytool_out thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:04:00,368 | INFO     | [data] queue_monitor thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:04:01,480 | INFO     | [monitor] cgroup control has ended
[2026-05-16 07:04:25] 2026-05-16 11:04:05,286 | INFO     | job.realtimelogging is not enabled
[2026-05-16 07:04:25] 2026-05-16 11:04:06,288 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-16 07:04:25] 2026-05-16 11:04:07,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460809295680)>', '<ExcThread(monitor, started 140459858982656)>']
[2026-05-16 07:04:25] 2026-05-16 11:04:12,151 | INFO     | all workflow threads have been joined
[2026-05-16 07:04:25] 2026-05-16 11:04:12,151 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-16 07:04:25] 2026-05-16 11:04:12,152 | INFO     | traces error code: 0
[2026-05-16 07:04:25] 2026-05-16 11:04:12,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-16 07:04:25] 2026-05-16 11:04:25,203 | INFO     | PID=18219 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-16 07:04:25] 2026-05-16 11:04:25,206 | INFO     | found 0 job(s) in 20 queues
[2026-05-16 07:04:25] 2026-05-16 11:04:25,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-16 07:04:25] 2026-05-16 11:04:25,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-16 07:04:25] 2026-05-16 11:04:25,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-16 07:04:25] 2026-05-16 11:04:25,207 | INFO     | [monitor] control thread has ended
[2026-05-16 07:04:25] 2026-05-16 11:04:25,330 [wrapper] ==== pilot stdout END ====
[2026-05-16 07:04:25] 2026-05-16 11:04:25,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-16 07:04:25] 2026-05-16 11:04:25,339 [wrapper] pilotpid: 18219
[2026-05-16 07:04:25] 2026-05-16 11:04:25,344 [wrapper] Pilot exit status: 0
[2026-05-16 07:04:25] 2026-05-16 11:04:25,362 [wrapper] pandaids: 7138291416
[2026-05-16 07:04:25] 2026-05-16 11:04:25,403 [wrapper] cleanup supervisor_pilot   561 18220
[2026-05-16 07:04:25] 2026-05-16 11:04:25,409 [wrapper] Test setup, not cleaning
[2026-05-16 07:04:25] 2026-05-16 11:04:25,414 [wrapper] apfmon messages muted
[2026-05-16 07:04:25] 2026-05-16 11:04:25,418 [wrapper] ==== wrapper stdout END ====
[2026-05-16 07:04:25] 2026-05-16 11:04:25,423 [wrapper] ==== wrapper stderr END ====
[2026-05-16 07:04:25]  *** Error codes and diagnostics ***
[2026-05-16 07:04:25]     "exeErrorCode": 0,
[2026-05-16 07:04:25]     "pilotErrorCode": 0,
[2026-05-16 07:04:25]  *** Listing of results directory ***
[2026-05-16 07:04:25] total 1129772
[2026-05-16 07:04:25] -rwx------ 1 boincer umatlas     36281 May 15 09:12 runpilot2-wrapper.sh
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas    683926 May 16 03:50 pilot3.tar.gz
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas      5631 May 16 05:08 queuedata.json
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas       100 May 16 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-16 07:04:25] -rwxr-xr-x 1 boincer umatlas      7986 May 16 05:17 run_atlas
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas       105 May 16 05:17 job.xml
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas 995034661 May 16 05:17 EVNT.46375503._000029.pool.root.1
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas     15667 May 16 05:17 start_atlas.sh
[2026-05-16 07:04:25] drwxrwx--x 2 boincer umatlas      4096 May 16 05:17 shared
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas    697424 May 16 05:17 input.tar.gz
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas         0 May 16 05:17 boinc_lockfile
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas      2597 May 16 05:17 pandaJob.out
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas        57 May 16 05:17 setup.sh.local
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas    993484 May 16 05:17 agis_schedconf.cvmfs.json
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas   1502367 May 16 05:17 agis_ddmendpoints.agis.ALL.json
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas       433 May 16 05:17 workernode_map.json
[2026-05-16 07:04:25] drwx------ 5 boincer umatlas      4096 May 16 05:17 pilot3
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas      5826 May 16 07:00 init_data.xml
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas 155816518 May 16 07:03 HITS.50087083._003542.pool.root.1
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas       488 May 16 07:03 boinc_task_state.xml
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas      1049 May 16 07:03 memory_monitor_summary.json
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas    353730 May 16 07:03 log.50087083._003542.job.log.tgz.1
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas      6429 May 16 07:03 heartbeat_new.json
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas      6320 May 16 07:03 heartbeat.json
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas        27 May 16 07:04 wrapper_checkpoint.txt
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas      8192 May 16 07:04 boinc_mmap_file
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas       745 May 16 07:04 pilotlog.txt
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas        95 May 16 07:04 pilot_heartbeat.json
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas    601295 May 16 07:04 log.50087083._003542.job.log.1
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas       357 May 16 07:04 output.list
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas       410 May 16 07:04 runtime_log
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas    972800 May 16 07:04 result.tar.gz
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas      8964 May 16 07:04 runtime_log.err
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas       660 May 16 07:04 1bcc82debc42.diag
[2026-05-16 07:04:25] -rw-r--r-- 1 boincer umatlas     21041 May 16 07:04 stderr.txt
[2026-05-16 07:04:25] HITS file was successfully produced:
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas 155816518 May 16 07:03 shared/HITS.pool.root.1
[2026-05-16 07:04:25]  *** Contents of shared directory: ***
[2026-05-16 07:04:25] total 1125544
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas 995034661 May 16 05:17 ATLAS.root_0
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas     15667 May 16 05:17 start_atlas.sh
[2026-05-16 07:04:25] -rw-r--r-- 2 boincer umatlas    697424 May 16 05:17 input.tar.gz
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas 155816518 May 16 07:03 HITS.pool.root.1
[2026-05-16 07:04:25] -rw------- 1 boincer umatlas    972800 May 16 07:04 result.tar.gz
07:04:27 (14096): run_atlas exited; CPU time 46756.543698
07:04:27 (14096): called boinc_finish(0)

</stderr_txt>
]]>

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