Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-15 03:01:07 (10812): vboxwrapper version 26210
2026-05-15 03:01:07 (10812): BOINC client version: 7.16.11
2026-05-15 03:01:07 (10812): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-05-15 03:01:08 (10812): Successfully copied 'init_data.xml' to the shared directory.
2026-05-15 03:01:08 (10812): Create VM. (boinc_b8c0aabdd6bda98d, slot#2)
2026-05-15 03:01:09 (10812): Setting Memory Size for VM. (4400MB)
2026-05-15 03:01:10 (10812): Setting CPU Count for VM. (4)
2026-05-15 03:01:10 (10812): Setting Chipset Options for VM.
2026-05-15 03:01:10 (10812): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-15 03:01:12 (10812): Setting Boot Options for VM.
2026-05-15 03:01:13 (10812): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-15 03:01:13 (10812): Enabling VM Network Access.
2026-05-15 03:01:13 (10812): Disabling USB Support for VM.
2026-05-15 03:01:14 (10812): Disabling COM Port Support for VM.
2026-05-15 03:01:15 (10812): Disabling LPT Port Support for VM.
2026-05-15 03:01:15 (10812): Disabling Audio Support for VM.
2026-05-15 03:01:15 (10812): Disabling Clipboard Support for VM.
2026-05-15 03:01:16 (10812): Disabling Drag and Drop Support for VM.
2026-05-15 03:01:17 (10812): Adding storage controller(s) to VM.
2026-05-15 03:01:17 (10812): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-15 03:01:18 (10812): Adding VirtualBox Guest Additions to VM.
2026-05-15 03:01:18 (10812): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-15 03:01:19 (10812): forwarding host port 53475 to guest port 80
2026-05-15 03:01:19 (10812): Enabling remote desktop for VM.
2026-05-15 03:01:19 (10812): Required extension pack not installed, remote desktop not enabled.
2026-05-15 03:01:19 (10812): Enabling shared directory for VM.
2026-05-15 03:01:20 (10812): Starting VM using VBoxManage interface. (boinc_b8c0aabdd6bda98d, slot#2)
2026-05-15 03:01:24 (10812): Successfully started VM. (PID = '7556')
2026-05-15 03:01:24 (10812): Reporting VM Process ID to BOINC.
2026-05-15 03:01:24 (10812): Guest Log: BIOS: VirtualBox 6.1.12
2026-05-15 03:01:24 (10812): Guest Log: CPUID EDX: 0x178bfbff
2026-05-15 03:01:24 (10812): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-15 03:01:24 (10812): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-15 03:01:24 (10812): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-15 03:01:24 (10812): Detected: Web Application Enabled (http://localhost:53475)
2026-05-15 03:01:24 (10812): Preference change detected
2026-05-15 03:01:24 (10812): Setting CPU throttle for VM. (100%)
2026-05-15 03:01:25 (10812): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-15 03:01:26 (10812): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-15 03:01:26 (10812): Guest Log: BIOS: Booting from Hard Disk...
2026-05-15 03:01:30 (10812): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-15 03:01:30 (10812): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-15 03:01:30 (10812): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-15 03:01:46 (10812): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-15 03:01:46 (10812): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-05-15 03:02:53 (10812): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000159 main     Log opened 2026-05-15T03:02:50.858500000Z
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000262 main     OS Product: Linux
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000331 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000364 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000394 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000395 main     Process ID: 1338
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.000396 main     Package type: LINUX_64BITS_GENERIC
2026-05-15 03:02:53 (10812): Guest Log: 00:00:00.002638 main     5.2.32 r132073 started. Verbose level = 0
2026-05-15 03:02:54 (10812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-15 03:02:54 (10812): Guest Log: [INFO] Mounting shared directory
2026-05-15 03:02:54 (10812): Guest Log: [INFO] Checking for init_data.xml
2026-05-15 03:03:03 (10812): Guest Log: 00:00:10.012507 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 857 123 000ns (GuestNow=1 778 832 182 719 964 000 ns GuestLast=1 778 814 170 862 841 000 ns fSetTimeLastLoop=true )
2026-05-15 03:03:53 (10812): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-15 03:03:53 (10812): Guest Log: [INFO] Detected branch: prod
2026-05-15 03:03:53 (10812): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-15 03:03:53 (10812): Guest Log: Copying input files
2026-05-15 03:04:02 (10812): Guest Log: Copied input files into RunAtlas.
2026-05-15 03:04:02 (10812): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-15 03:04:02 (10812): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-15 03:04:02 (10812): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-15 03:04:02 (10812): Guest Log: Further information can be found at the LHC@home message board.
2026-05-15 03:04:13 (10812): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-15 03:04:13 (10812): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-15 03:04:13 (10812): Guest Log: 2.6.3.0 1635 0 32028 159532 4 1 3117651 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-05-15 03:04:26 (10812): Guest Log: copied the webapp to /var/www
2026-05-15 03:04:26 (10812): Guest Log: ATHENA_PROC_NUMBER=4
2026-05-15 03:04:26 (10812): Guest Log: ATHENA_CORE_NUMBER=4
2026-05-15 03:04:26 (10812): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-15 03:04:27 (10812): Guest Log:  *** Starting ATLAS job. (PandaID=7139221292 taskID=50250192) ***
2026-05-15 03:11:18 (10812): Guest Log:  *** Job finished ***
2026-05-15 03:11:18 (10812): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,033 | INFO     | PID=6055 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,035 | INFO     | found 0 job(s) in 20 queues
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:14,036 | INFO     | [monitor] control thread has ended
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,396 | INFO     | all workflow threads have been joined
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,396 | INFO     | end of generic workflow (traces error code: 0)
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,396 | INFO     | traces error code: 0
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,475 [wrapper] ==== pilot stdout END ====
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,480 [wrapper] ==== wrapper stdout RESUME ====
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,485 [wrapper] pilotpid: 6055
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,490 [wrapper] Pilot exit status: 0
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,554 [wrapper] pandaids: 7139221292
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,591 [wrapper] cleanup supervisor_pilot  6061 6056
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,601 [wrapper] Test setup, not cleaning
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,607 [wrapper] apfmon messages muted
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,613 [wrapper] ==== wrapper stdout END ====
2026-05-15 03:11:18 (10812): Guest Log: 2026-05-15 08:11:16,618 [wrapper] ==== wrapper stderr END ====
2026-05-15 03:11:18 (10812): Guest Log:  *** Error codes and diagnostics ***
2026-05-15 03:11:18 (10812): Guest Log:     "exeErrorCode": 65,
2026-05-15 03:11:18 (10812): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-05-15 03:11:18 (10812): Guest Log:     "pilotErrorCode": 1305,
2026-05-15 03:11:18 (10812): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-05-15 03:11:18 (10812): Guest Log:  *** Listing of results directory ***
2026-05-15 03:11:18 (10812): Guest Log: total 4160
2026-05-15 03:11:18 (10812): Guest Log: -rwx------. 1 atlas atlas   36281 May 14 21:09 runpilot2-wrapper.sh
2026-05-15 03:11:18 (10812): Guest Log: -rw-r--r--. 1 atlas atlas    5631 May 15 07:08 queuedata.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-r--r--. 1 atlas atlas  683926 May 15 07:08 pilot3.tar.gz
2026-05-15 03:11:18 (10812): Guest Log: -rwxr-xr-x. 1 atlas atlas    8930 May 15 08:03 init_data.xml
2026-05-15 03:11:18 (10812): Guest Log: -rwxr-xr-x. 1 atlas atlas  697447 May 15 08:03 input.tar.gz
2026-05-15 03:11:18 (10812): Guest Log: -rwxr-xr-x. 1 atlas atlas   15667 May 15 08:03 start_atlas.sh
2026-05-15 03:11:18 (10812): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 15 08:04 EVNT.50238157._000328.pool.root.1 -> /data/./ATLAS.root_0
2026-05-15 03:11:18 (10812): Guest Log: -rw-r--r--. 1 atlas atlas    2560 May 15 08:04 pandaJob.out
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas  993491 May 15 08:05 agis_schedconf.cvmfs.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas 1502367 May 15 08:05 agis_ddmendpoints.agis.ALL.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas     426 May 15 08:06 workernode_map.json
2026-05-15 03:11:18 (10812): Guest Log: drwx------. 5 atlas atlas    4096 May 15 08:06 pilot3
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas    1003 May 15 08:08 memory_monitor_summary.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas   21471 May 15 08:08 log.50250192._027962.job.log.tgz.1
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas    7114 May 15 08:10 heartbeat_new.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas    7076 May 15 08:10 heartbeat.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas      95 May 15 08:11 pilot_heartbeat.json
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas    4990 May 15 08:11 pilotlog.txt
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas   82684 May 15 08:11 log.50250192._027962.job.log.1
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas     188 May 15 08:11 output.list
2026-05-15 03:11:18 (10812): Guest Log: -rw-r--r--. 1 atlas atlas     410 May 15 08:11 runtime_log
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas  122880 May 15 08:11 result.tar.gz
2026-05-15 03:11:18 (10812): Guest Log: -rw-r--r--. 1 atlas atlas    8227 May 15 08:11 runtime_log.err
2026-05-15 03:11:18 (10812): Guest Log: -rw-------. 1 atlas atlas     645 May 15 08:11 3a02bc39fc8b.diag
2026-05-15 03:11:18 (10812): Guest Log: Looking for outputfile HITS.50250192._027962.pool.root.1
2026-05-15 03:11:18 (10812): Guest Log: No HITS file was produced
2026-05-15 03:11:18 (10812): Guest Log: Successfully finished the ATLAS job!
2026-05-15 03:11:18 (10812): Guest Log: Copying the results back to the shared directory!
2026-05-15 03:11:18 (10812): Guest Log:  *** Contents of shared directory: ***
2026-05-15 03:11:18 (10812): Guest Log: total 100188
2026-05-15 03:11:18 (10812): Guest Log: -rwxrwxrwx. 1 root root 101737801 May 15 08:01 ATLAS.root_0
2026-05-15 03:11:18 (10812): Guest Log: -rwxrwxrwx. 1 root root      8930 May 15 08:01 init_data.xml
2026-05-15 03:11:18 (10812): Guest Log: -rwxrwxrwx. 1 root root    697447 May 15 07:37 input.tar.gz
2026-05-15 03:11:18 (10812): Guest Log: -rwxrwxrwx. 1 root root    122880 May 15 08:11 result.tar.gz
2026-05-15 03:11:18 (10812): Guest Log: -rwxrwxrwx. 1 root root     15667 May 15 07:37 start_atlas.sh
2026-05-15 03:11:18 (10812): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-15 03:11:18 (10812): VM Completion File Detected.
2026-05-15 03:11:18 (10812): Powering off VM.
2026-05-15 03:11:19 (10812): Successfully stopped VM.
2026-05-15 03:11:19 (10812): Deregistering VM. (boinc_b8c0aabdd6bda98d, slot#2)
2026-05-15 03:11:19 (10812): Removing network bandwidth throttle group from VM.
2026-05-15 03:11:20 (10812): Removing VM from VirtualBox.
2026-05-15 03:11:25 (10812): called boinc_finish(0)

</stderr_txt>
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