Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:20 (12769): wrapper (7.7.26015): starting
09:44:20 (12769): wrapper: running run_atlas (--nthreads 8)
[2026-05-15 09:44:20] Arguments: --nthreads 8
[2026-05-15 09:44:20] Threads: 8
[2026-05-15 09:44:20] Checking for CVMFS
[2026-05-15 09:44:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 09:44:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 09:44:20] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 09:44:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 09:44:20] 2.11.2.0 29977 42638 108320 159532 2 384 21131516 25165824 345 130560 0 18185476 99.937 8680566 8497 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-15 09:44:20] CVMFS is ok
[2026-05-15 09:44:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 09:44:20] Checking for apptainer binary...
[2026-05-15 09:44:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 09:44:20] Running /usr/bin/apptainer --version
[2026-05-15 09:44:20] apptainer version 1.3.2-1.el7
[2026-05-15 09:44:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 09:44:22] cg-vwn385.simple-grid.lan
[2026-05-15 09:44:22] apptainer works
[2026-05-15 09:44:22] Set ATHENA_PROC_NUMBER=8
[2026-05-15 09:44:22] Set ATHENA_CORE_NUMBER=8
[2026-05-15 09:44:22] Starting ATLAS job with PandaID=7139219468
[2026-05-15 09:44:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 09:48:48]  *** The last 200 lines of the pilot log: ***
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | found no stored workdir sizes
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | WARNING  | wrong length of table data, x=[1778831110.0], y=[948.0] (must be same and length>=4)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . Timing measurements:
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . get job = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . initial setup = 6 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload setup = 12 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-in = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload execution = 34 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-out = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . log creation = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139219468/pilotlog.txt
[2026-05-15 09:48:48] 2026-05-15 07:47:43,788 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 09:48:48] - Log from pilotlog.txt -
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | INFO     | extracted standard info from prmon json
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | found no stored workdir sizes
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | WARNING  | wrong length of table data, x=[1778831110.0], y=[948.0] (must be same and length>=4)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . Timing measurements:
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . get job = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . initial setup = 6 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload setup = 12 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-in = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload execution = 34 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-out = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . log creation = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139219468/pilotlog.txt
[2026-05-15 09:48:48] 2026-05-15 07:47:43,788 | WARNING  | 
[2026-05-15 09:48:48] [begin log extracts]
[2026-05-15 09:48:48] - Log from pilotlog.txt -
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | INFO     | extracted standard info from prmon json
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:48:48] 2026-05-15 07:47:43,767 | WARNING  | found no stored workdir sizes
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | WARNING  | wrong length of table data, x=[1778831110.0], y=[948.0] (must be same and length>=4)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,768 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . Timing measurements:
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . get job = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . initial setup = 6 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload setup = 12 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-in = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . payload execution = 34 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . stage-out = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | . log creation = 0 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,769 | INFO     | ..............................
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:48:48] 2026-05-15 07:47:43,770 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139219468/pilotlog.txt
[2026-05-15 09:48:48] [end log extracts]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,789 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,790 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 09:48:48] 2026-05-15 07:47:43,898 | INFO     | 
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | job summary report
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | --------------------------------------------------
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | PanDA job id: 7139219468
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | task id: 50250192
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 07:45:34,930 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 09:48:48] 2026-05-15 07:47:43,899 | INFO     | pilot state: failed 
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | transexitcode: 65
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | exeerrorcode: 65
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | exitcode: 65
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | cpuconsumptiontime: 25 s
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | nevents: 0
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | neventsw: 0
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | pid: 20989
[2026-05-15 09:48:48] 2026-05-15 07:47:43,900 | INFO     | pgrp: 20989
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | corecount: 8
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | event service: False
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | sizes: {0: 2265701, 1: 2267530, 11: 2267530, 50: 2290918, 51: 2295214, 54: 2295242, 172: 2295536}
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | --------------------------------------------------
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | 
[2026-05-15 09:48:48] 2026-05-15 07:47:43,901 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-05-15 09:48:48] 2026-05-15 07:47:43,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | job 7139219468 has completed (purged errors)
[2026-05-15 09:48:48] 2026-05-15 07:47:43,925 | INFO     | overall cleanup function is called
[2026-05-15 09:48:48] 2026-05-15 07:47:44,932 | INFO     | --- collectZombieJob: --- 10, [20989]
[2026-05-15 09:48:48] 2026-05-15 07:47:44,932 | INFO     | zombie collector waiting for pid 20989
[2026-05-15 09:48:48] 2026-05-15 07:47:44,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 09:48:48] 2026-05-15 07:47:44,932 | INFO     | collected zombie processes
[2026-05-15 09:48:48] 2026-05-15 07:47:44,933 | INFO     | will attempt to kill all subprocesses of pid=20989
[2026-05-15 09:48:48] 2026-05-15 07:47:44,990 | INFO     | process IDs to be killed: [20989] (in reverse order)
[2026-05-15 09:48:48] 2026-05-15 07:47:45,037 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 09:48:48] 2026-05-15 07:47:45,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 09:48:48] 2026-05-15 07:47:45,039 | INFO     | did not find any defunct processes belonging to 20989
[2026-05-15 09:48:48] 2026-05-15 07:47:45,041 | INFO     | did not find any defunct processes belonging to 20989
[2026-05-15 09:48:48] 2026-05-15 07:47:45,041 | INFO     | Ready for new job
[2026-05-15 09:48:48] 2026-05-15 07:47:45,042 | INFO     | ***************************************
[2026-05-15 09:48:48] 2026-05-15 07:47:45,042 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 09:48:48] 2026-05-15 07:47:45,043 | INFO     | ***************************************
[2026-05-15 09:48:48] 2026-05-15 07:47:45,043 | INFO     | 
[2026-05-15 09:48:48] 2026-05-15 07:47:45,043 | INFO     | pilot is running in a VM
[2026-05-15 09:48:48] 2026-05-15 07:47:45,043 | INFO     | architecture information:
[2026-05-15 09:48:48] 2026-05-15 07:47:45,044 | INFO     | executing command: cat /etc/os-release
[2026-05-15 09:48:48] 2026-05-15 07:47:45,059 | INFO     | cat /etc/os-release:
[2026-05-15 09:48:48] NAME="CentOS Linux"
[2026-05-15 09:48:48] VERSION="7 (Core)"
[2026-05-15 09:48:48] ID="centos"
[2026-05-15 09:48:48] ID_LIKE="rhel fedora"
[2026-05-15 09:48:48] VERSION_ID="7"
[2026-05-15 09:48:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 09:48:48] ANSI_COLOR="0;31"
[2026-05-15 09:48:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 09:48:48] HOME_URL="https://www.centos.org/"
[2026-05-15 09:48:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 09:48:48] 
[2026-05-15 09:48:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 09:48:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 09:48:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 09:48:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 09:48:48] 
[2026-05-15 09:48:48] 2026-05-15 07:47:45,060 | INFO     | ***************************************
[2026-05-15 09:48:48] 2026-05-15 07:47:45,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-05-15 09:48:48] 2026-05-15 07:47:45,580 | INFO     | sufficient remaining disk space (498588450816 B)
[2026-05-15 09:48:48] 2026-05-15 07:47:45,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 09:48:48] 2026-05-15 07:47:45,581 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 09:48:48] 2026-05-15 07:47:45,581 | INFO     | update_server=False
[2026-05-15 09:48:48] 2026-05-15 07:47:45,581 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 09:48:48] 2026-05-15 07:47:45,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 09:48:48] 2026-05-15 07:47:45,753 | INFO     | all payload control threads have been joined
[2026-05-15 09:48:48] 2026-05-15 07:47:45,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 09:48:48] 2026-05-15 07:47:46,059 | INFO     | all data control threads have been joined
[2026-05-15 09:48:48] 2026-05-15 07:47:46,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 09:48:48] 2026-05-15 07:47:46,097 | INFO     | aborting loop
[2026-05-15 09:48:48] 2026-05-15 07:47:46,582 | INFO     | [job] retrieve thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:46,583 | INFO     | all job control threads have been joined
[2026-05-15 09:48:48] 2026-05-15 07:47:46,586 | INFO     | [job] queue monitor thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:46,758 | INFO     | [payload] control thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:46,772 | INFO     | [payload] failed_post thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,021 | INFO     | [job] validate thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,064 | INFO     | [data] control thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,101 | INFO     | [job] job monitor thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,306 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,329 | INFO     | [payload] validate_post thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,558 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,589 | INFO     | [job] control thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,848 | INFO     | [data] copytool_in thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,909 | INFO     | [data] copytool_out thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:47,947 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:47:49,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 09:48:48] 2026-05-15 07:47:53,087 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 09:48:48] 2026-05-15 07:48:16,056 | INFO     | PID=16495 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-15 09:48:48] 2026-05-15 07:48:16,057 | INFO     | .. there are 2 such processes running
[2026-05-15 09:48:48] 2026-05-15 07:48:16,057 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 09:48:48] 2026-05-15 07:48:16,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 09:48:48] 2026-05-15 07:48:16,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 09:48:48] 2026-05-15 07:48:40,697 | INFO     | [monitor] cgroup control has ended
[2026-05-15 09:48:48] 2026-05-15 07:48:42,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139699984820032)>', '<ExcThread(monitor, started 139699112900352)>']
[2026-05-15 09:48:48] 2026-05-15 07:48:43,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 09:48:48] 2026-05-15 07:48:43,193 | INFO     | [monitor] control thread has ended
[2026-05-15 09:48:48] 2026-05-15 07:48:47,766 | INFO     | all workflow threads have been joined
[2026-05-15 09:48:48] 2026-05-15 07:48:47,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 09:48:48] 2026-05-15 07:48:47,766 | INFO     | traces error code: 0
[2026-05-15 09:48:48] 2026-05-15 07:48:47,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 09:48:48] 2026-05-15 07:48:47,889 [wrapper] ==== pilot stdout END ====
[2026-05-15 09:48:48] 2026-05-15 07:48:47,893 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 09:48:48] 2026-05-15 07:48:47,896 [wrapper] pilotpid: 16495
[2026-05-15 09:48:48] 2026-05-15 07:48:47,899 [wrapper] Pilot exit status: 0
[2026-05-15 09:48:48] 2026-05-15 07:48:47,916 [wrapper] pandaids: 7139219468
[2026-05-15 09:48:48] 2026-05-15 07:48:47,950 [wrapper] cleanup supervisor_pilot 16501 16496
[2026-05-15 09:48:48] 2026-05-15 07:48:47,957 [wrapper] Test setup, not cleaning
[2026-05-15 09:48:48] 2026-05-15 07:48:47,964 [wrapper] apfmon messages muted
[2026-05-15 09:48:48] 2026-05-15 07:48:47,967 [wrapper] ==== wrapper stdout END ====
[2026-05-15 09:48:48] 2026-05-15 07:48:47,970 [wrapper] ==== wrapper stderr END ====
[2026-05-15 09:48:48]  *** Error codes and diagnostics ***
[2026-05-15 09:48:48]     "exeErrorCode": 65,
[2026-05-15 09:48:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 09:48:48]     "pilotErrorCode": 1305,
[2026-05-15 09:48:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 09:48:48]  *** Listing of results directory ***
[2026-05-15 09:48:48] total 105356
[2026-05-15 09:48:48] -rwx------. 1 boinc boinc     36281 May 14 23:09 runpilot2-wrapper.sh
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc      5631 May 15 07:11 queuedata.json
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc    683926 May 15 07:12 pilot3.tar.gz
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc       100 May 15 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 09:48:48] -rwxr-xr-x. 1 boinc boinc      7986 May 15 09:44 run_atlas
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc       105 May 15 09:44 job.xml
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc 103591222 May 15 09:44 EVNT.50238157._000289.pool.root.1
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc     15667 May 15 09:44 start_atlas.sh
[2026-05-15 09:48:48] drwxrwx--x. 2 boinc boinc        68 May 15 09:44 shared
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc    697442 May 15 09:44 input.tar.gz
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc      6307 May 15 09:44 init_data.xml
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc         0 May 15 09:44 boinc_lockfile
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc      2560 May 15 09:44 pandaJob.out
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc    993491 May 15 09:44 agis_schedconf.cvmfs.json
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc   1502367 May 15 09:44 agis_ddmendpoints.agis.ALL.json
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc       415 May 15 09:44 workernode_map.json
[2026-05-15 09:48:48] drwx------. 5 boinc boinc      4096 May 15 09:44 pilot3
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc       481 May 15 09:45 boinc_task_state.xml
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc       933 May 15 09:45 memory_monitor_summary.json
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc     20334 May 15 09:45 log.50250192._027411.job.log.tgz.1
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc        95 May 15 09:47 pilot_heartbeat.json
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc      6989 May 15 09:47 heartbeat_new.json
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc      6951 May 15 09:47 heartbeat.json
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc      8192 May 15 09:48 boinc_mmap_file
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc        23 May 15 09:48 wrapper_checkpoint.txt
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc      4884 May 15 09:48 pilotlog.txt
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc     75444 May 15 09:48 log.50250192._027411.job.log.1
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc       188 May 15 09:48 output.list
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc       410 May 15 09:48 runtime_log
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc    112640 May 15 09:48 result.tar.gz
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc      8301 May 15 09:48 runtime_log.err
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc       637 May 15 09:48 3a00e5d4718c.diag
[2026-05-15 09:48:48] -rw-r--r--. 1 boinc boinc     21292 May 15 09:48 stderr.txt
[2026-05-15 09:48:48] No HITS result produced
[2026-05-15 09:48:48]  *** Contents of shared directory: ***
[2026-05-15 09:48:48] total 101976
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc 103591222 May 15 09:44 ATLAS.root_0
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc     15667 May 15 09:44 start_atlas.sh
[2026-05-15 09:48:48] -rw-r--r--. 2 boinc boinc    697442 May 15 09:44 input.tar.gz
[2026-05-15 09:48:48] -rw-------. 1 boinc boinc    112640 May 15 09:48 result.tar.gz
09:48:49 (12769): run_atlas exited; CPU time 25.746401
09:48:49 (12769): called boinc_finish(0)

</stderr_txt>
]]>

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