Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:16 (2102376): wrapper (7.7.26015): starting
06:44:16 (2102376): wrapper: running run_atlas (--nthreads 3)
[2026-05-15 06:44:16] Arguments: --nthreads 3
[2026-05-15 06:44:16] Threads: 3
[2026-05-15 06:44:16] Checking for CVMFS
[2026-05-15 06:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 06:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 06:44:17] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 06:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 06:44:17] 2.9.2.0 2050884 14 50184 159529 1 186 19251712 36864000 0 130560 0 193636 99.992 2850 31666 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-15 06:44:17] CVMFS is ok
[2026-05-15 06:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-15 06:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-15 06:44:17] Further information can be found at the LHC@home message board.
[2026-05-15 06:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 06:44:17] Checking for apptainer binary...
[2026-05-15 06:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 06:44:17] Running /usr/bin/apptainer --version
[2026-05-15 06:44:17] apptainer version 1.4.1-1.1
[2026-05-15 06:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 06:44:17] atlasA228b
[2026-05-15 06:44:17] apptainer works
[2026-05-15 06:44:18] Set ATHENA_PROC_NUMBER=3
[2026-05-15 06:44:18] Set ATHENA_CORE_NUMBER=3
[2026-05-15 06:44:18] Starting ATLAS job with PandaID=7139268571
[2026-05-15 06:44:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 06:47:46]  *** The last 200 lines of the pilot log: ***
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | found no stored workdir sizes
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | WARNING  | wrong length of table data, x=[1778820286.0], y=[2564.0] (must be same and length>=4)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | could have reported an average CPU frequency of 3581 MHz (4 samples)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . Timing measurements:
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . get job = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . initial setup = 3 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload setup = 5 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-in = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload execution = 31 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-out = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . log creation = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7139268571/pilotlog.txt
[2026-05-15 06:47:46] 2026-05-15 04:47:14,042 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 06:47:46] - Log from pilotlog.txt -
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | INFO     | extracted standard info from prmon json
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | found no stored workdir sizes
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | WARNING  | wrong length of table data, x=[1778820286.0], y=[2564.0] (must be same and length>=4)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | could have reported an average CPU frequency of 3581 MHz (4 samples)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . Timing measurements:
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . get job = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . initial setup = 3 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload setup = 5 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-in = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload execution = 31 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-out = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . log creation = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7139268571/pilotlog.txt
[2026-05-15 06:47:46] 2026-05-15 04:47:14,043 | WARNING  | 
[2026-05-15 06:47:46] [begin log extracts]
[2026-05-15 06:47:46] - Log from pilotlog.txt -
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | INFO     | extracted standard info from prmon json
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 06:47:46] 2026-05-15 04:47:14,027 | WARNING  | found no stored workdir sizes
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | WARNING  | wrong length of table data, x=[1778820286.0], y=[2564.0] (must be same and length>=4)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | could have reported an average CPU frequency of 3581 MHz (4 samples)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . Timing measurements:
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . get job = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . initial setup = 3 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload setup = 5 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-in = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . payload execution = 31 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . stage-out = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | . log creation = 0 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | ..............................
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 06:47:46] 2026-05-15 04:47:14,028 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-7139268571/pilotlog.txt
[2026-05-15 06:47:46] [end log extracts]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,043 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,043 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 06:47:46] 2026-05-15 04:47:14,249 | INFO     | 
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | job summary report
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | --------------------------------------------------
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | PanDA job id: 7139268571
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | task id: 50250192
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 04:45:10,247 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | pilot state: failed 
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | transexitcode: 65
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | exeerrorcode: 65
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | exitcode: 65
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | cpuconsumptiontime: 11 s
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | nevents: 0
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | neventsw: 0
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | pid: 2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | pgrp: 2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | corecount: 3
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | event service: False
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | sizes: {0: 2265702, 1: 2267531, 11: 2267531, 40: 2290944, 41: 2295270, 156: 2295408}
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | --------------------------------------------------
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | 
[2026-05-15 06:47:46] 2026-05-15 04:47:14,250 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-15 06:47:46] 2026-05-15 04:47:14,266 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 06:47:46] 2026-05-15 04:47:14,267 | INFO     | job 7139268571 has completed (purged errors)
[2026-05-15 06:47:46] 2026-05-15 04:47:14,268 | INFO     | overall cleanup function is called
[2026-05-15 06:47:46] 2026-05-15 04:47:15,274 | INFO     | --- collectZombieJob: --- 10, [2110542]
[2026-05-15 06:47:46] 2026-05-15 04:47:15,274 | INFO     | zombie collector waiting for pid 2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:15,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 06:47:46] 2026-05-15 04:47:15,274 | INFO     | collected zombie processes
[2026-05-15 06:47:46] 2026-05-15 04:47:15,274 | INFO     | will attempt to kill all subprocesses of pid=2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:15,317 | INFO     | process IDs to be killed: [2110542] (in reverse order)
[2026-05-15 06:47:46] 2026-05-15 04:47:15,349 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 06:47:46] 2026-05-15 04:47:15,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 06:47:46] 2026-05-15 04:47:15,351 | INFO     | did not find any defunct processes belonging to 2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:15,352 | INFO     | did not find any defunct processes belonging to 2110542
[2026-05-15 06:47:46] 2026-05-15 04:47:15,352 | INFO     | Ready for new job
[2026-05-15 06:47:46] 2026-05-15 04:47:15,353 | INFO     | ***************************************
[2026-05-15 06:47:46] 2026-05-15 04:47:15,353 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 06:47:46] 2026-05-15 04:47:15,353 | INFO     | ***************************************
[2026-05-15 06:47:46] 2026-05-15 04:47:15,353 | INFO     | 
[2026-05-15 06:47:46] 2026-05-15 04:47:15,353 | INFO     | architecture information:
[2026-05-15 06:47:46] 2026-05-15 04:47:15,354 | INFO     | executing command: cat /etc/os-release
[2026-05-15 06:47:46] 2026-05-15 04:47:15,364 | INFO     | cat /etc/os-release:
[2026-05-15 06:47:46] NAME="CentOS Linux"
[2026-05-15 06:47:46] VERSION="7 (Core)"
[2026-05-15 06:47:46] ID="centos"
[2026-05-15 06:47:46] ID_LIKE="rhel fedora"
[2026-05-15 06:47:46] VERSION_ID="7"
[2026-05-15 06:47:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 06:47:46] ANSI_COLOR="0;31"
[2026-05-15 06:47:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 06:47:46] HOME_URL="https://www.centos.org/"
[2026-05-15 06:47:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 06:47:46] 
[2026-05-15 06:47:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 06:47:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 06:47:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 06:47:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 06:47:46] 
[2026-05-15 06:47:46] 2026-05-15 04:47:15,364 | INFO     | ***************************************
[2026-05-15 06:47:46] 2026-05-15 04:47:15,867 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | INFO     | sufficient remaining disk space (287345475584 B)
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | INFO     | update_server=False
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 06:47:46] 2026-05-15 04:47:15,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 06:47:46] 2026-05-15 04:47:15,882 | INFO     | aborting loop
[2026-05-15 06:47:46] 2026-05-15 04:47:16,084 | INFO     | all data control threads have been joined
[2026-05-15 06:47:46] 2026-05-15 04:47:16,144 | INFO     | all job control threads have been joined
[2026-05-15 06:47:46] 2026-05-15 04:47:16,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 06:47:46] 2026-05-15 04:47:16,885 | INFO     | [job] queue monitor thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:16,886 | INFO     | [job] retrieve thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:16,887 | INFO     | [job] job monitor thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:16,898 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:16,986 | INFO     | [data] copytool_in thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,090 | INFO     | [data] control thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,150 | INFO     | [job] control thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,311 | INFO     | all payload control threads have been joined
[2026-05-15 06:47:46] 2026-05-15 04:47:17,382 | INFO     | [payload] failed_post thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,408 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 06:47:46] 2026-05-15 04:47:17,522 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:17,835 | INFO     | [payload] validate_post thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:18,292 | INFO     | [job] validate thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:18,317 | INFO     | [payload] control thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:18,348 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:18,714 | INFO     | [data] copytool_out thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:21,515 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 06:47:46] 2026-05-15 04:47:27,077 | INFO     | [monitor] cgroup control has ended
[2026-05-15 06:47:46] 2026-05-15 04:47:27,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252875134784)>', '<ExcThread(monitor, started 140251947329280)>']
[2026-05-15 06:47:46] 2026-05-15 04:47:32,774 | INFO     | all workflow threads have been joined
[2026-05-15 06:47:46] 2026-05-15 04:47:32,775 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 06:47:46] 2026-05-15 04:47:32,775 | INFO     | traces error code: 0
[2026-05-15 06:47:46] 2026-05-15 04:47:32,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 06:47:46] 2026-05-15 04:47:45,871 | INFO     | PID=2106111 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-15 06:47:46] 2026-05-15 04:47:45,872 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 06:47:46] 2026-05-15 04:47:45,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 06:47:46] 2026-05-15 04:47:45,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 06:47:46] 2026-05-15 04:47:45,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 06:47:46] 2026-05-15 04:47:45,872 | INFO     | [monitor] control thread has ended
[2026-05-15 06:47:46] 2026-05-15 04:47:45,919 [wrapper] ==== pilot stdout END ====
[2026-05-15 06:47:46] 2026-05-15 04:47:45,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 06:47:46] 2026-05-15 04:47:45,925 [wrapper] pilotpid: 2106111
[2026-05-15 06:47:46] 2026-05-15 04:47:45,927 [wrapper] Pilot exit status: 0
[2026-05-15 06:47:46] 2026-05-15 04:47:45,935 [wrapper] pandaids: 7139268571
[2026-05-15 06:47:46] 2026-05-15 04:47:45,954 [wrapper] cleanup supervisor_pilot 2106117 2106112
[2026-05-15 06:47:46] 2026-05-15 04:47:45,957 [wrapper] Test setup, not cleaning
[2026-05-15 06:47:46] 2026-05-15 04:47:45,959 [wrapper] apfmon messages muted
[2026-05-15 06:47:46] 2026-05-15 04:47:45,962 [wrapper] ==== wrapper stdout END ====
[2026-05-15 06:47:46] 2026-05-15 04:47:45,964 [wrapper] ==== wrapper stderr END ====
[2026-05-15 06:47:46]  *** Error codes and diagnostics ***
[2026-05-15 06:47:46]     "exeErrorCode": 65,
[2026-05-15 06:47:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 06:47:46]     "pilotErrorCode": 1305,
[2026-05-15 06:47:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 06:47:46]  *** Listing of results directory ***
[2026-05-15 06:47:46] total 105100
[2026-05-15 06:47:46] -rwx------ 1 boinc boinc     36281 May 14 23:08 runpilot2-wrapper.sh
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc    683926 May 15 05:58 pilot3.tar.gz
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc      5631 May 15 06:08 queuedata.json
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc       100 May 15 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 06:47:46] -rwxr-xr-x 1 boinc boinc      7986 May 15 06:44 run_atlas
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc       105 May 15 06:44 job.xml
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc 103315880 May 15 06:44 EVNT.50238157._000269.pool.root.1
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc    697446 May 15 06:44 input.tar.gz
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc     15667 May 15 06:44 start_atlas.sh
[2026-05-15 06:47:46] drwxrwx--x 2 boinc boinc      4096 May 15 06:44 shared
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc         0 May 15 06:44 boinc_setup_complete
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc      6363 May 15 06:44 init_data.xml
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc         0 May 15 06:44 boinc_lockfile
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc      2559 May 15 06:44 pandaJob.out
[2026-05-15 06:47:46] -rw------- 1 boinc boinc    993483 May 15 06:44 agis_schedconf.cvmfs.json
[2026-05-15 06:47:46] -rw------- 1 boinc boinc   1502367 May 15 06:44 agis_ddmendpoints.agis.ALL.json
[2026-05-15 06:47:46] -rw------- 1 boinc boinc       427 May 15 06:44 workernode_map.json
[2026-05-15 06:47:46] drwx------ 5 boinc boinc      4096 May 15 06:44 pilot3
[2026-05-15 06:47:46] -rw------- 1 boinc boinc       953 May 15 06:45 memory_monitor_summary.json
[2026-05-15 06:47:46] -rw------- 1 boinc boinc     20586 May 15 06:45 log.50250192._028790.job.log.tgz.1
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc       480 May 15 06:45 boinc_task_state.xml
[2026-05-15 06:47:46] -rw------- 1 boinc boinc      7018 May 15 06:47 heartbeat_new.json
[2026-05-15 06:47:46] -rw------- 1 boinc boinc      6980 May 15 06:47 heartbeat.json
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc        22 May 15 06:47 wrapper_checkpoint.txt
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc      8192 May 15 06:47 boinc_mmap_file
[2026-05-15 06:47:46] -rw------- 1 boinc boinc       747 May 15 06:47 pilotlog.txt
[2026-05-15 06:47:46] -rw------- 1 boinc boinc        95 May 15 06:47 pilot_heartbeat.json
[2026-05-15 06:47:46] -rw------- 1 boinc boinc     74614 May 15 06:47 log.50250192._028790.job.log.1
[2026-05-15 06:47:46] -rw------- 1 boinc boinc       188 May 15 06:47 output.list
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc       410 May 15 06:47 runtime_log
[2026-05-15 06:47:46] -rw------- 1 boinc boinc    112640 May 15 06:47 result.tar.gz
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc      8386 May 15 06:47 runtime_log.err
[2026-05-15 06:47:46] -rw------- 1 boinc boinc       651 May 15 06:47 39c00fe3226b.diag
[2026-05-15 06:47:46] -rw-r--r-- 1 boinc boinc     21613 May 15 06:47 stderr.txt
[2026-05-15 06:47:46] No HITS result produced
[2026-05-15 06:47:46]  *** Contents of shared directory: ***
[2026-05-15 06:47:46] total 101712
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc 103315880 May 15 06:44 ATLAS.root_0
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc    697446 May 15 06:44 input.tar.gz
[2026-05-15 06:47:46] -rw-r--r-- 2 boinc boinc     15667 May 15 06:44 start_atlas.sh
[2026-05-15 06:47:46] -rw------- 1 boinc boinc    112640 May 15 06:47 result.tar.gz
06:47:47 (2102376): run_atlas exited; CPU time 10.005770
06:47:47 (2102376): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN