Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:50:10 (2326846): wrapper (7.7.26015): starting
23:50:10 (2326846): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 23:50:10] Arguments: --nthreads 12
[2026-05-14 23:50:10] Threads: 12
[2026-05-14 23:50:10] Checking for CVMFS
[2026-05-14 23:50:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 23:50:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 23:50:11] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 23:50:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 23:50:11] 2.13.3.0 9925 21003 196252 159527 2 460 32268491 32935936 20366 16776704 0 140110305 99.748 98675419 30591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 23:50:11] CVMFS is ok
[2026-05-14 23:50:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 23:50:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 23:50:11] Further information can be found at the LHC@home message board.
[2026-05-14 23:50:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 23:50:11] Checking for apptainer binary...
[2026-05-14 23:50:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 23:50:11] Running /usr/bin/apptainer --version
[2026-05-14 23:50:11] apptainer version 1.4.5-3.el9
[2026-05-14 23:50:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 23:50:11] c-5-5.aglt2.org
[2026-05-14 23:50:11] apptainer works
[2026-05-14 23:50:11] Set ATHENA_PROC_NUMBER=12
[2026-05-14 23:50:11] Set ATHENA_CORE_NUMBER=12
[2026-05-14 23:50:11] Starting ATLAS job with PandaID=7139193122
[2026-05-14 23:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 23:54:43]  *** The last 200 lines of the pilot log: ***
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | found no stored workdir sizes
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | WARNING  | wrong length of table data, x=[1778817064.0], y=[1062.0] (must be same and length>=4)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | . Timing measurements:
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . get job = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . initial setup = 10 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload setup = 15 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-in = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload execution = 41 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-out = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . log creation = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:54:43] 2026-05-15 03:53:40,547 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193122/pilotlog.txt
[2026-05-14 23:54:43] 2026-05-15 03:53:40,562 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 23:54:43] - Log from pilotlog.txt -
[2026-05-14 23:54:43] 2026-05-15 03:53:40,543 | INFO     | extracted standard info from prmon json
[2026-05-14 23:54:43] 2026-05-15 03:53:40,543 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | found no stored workdir sizes
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | WARNING  | wrong length of table data, x=[1778817064.0], y=[1062.0] (must be same and length>=4)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | . Timing measurements:
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . get job = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . initial setup = 10 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload setup = 15 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-in = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload execution = 41 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-out = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . log creation = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:54:43] 2026-05-15 03:53:40,547 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193122/pilotlog.txt
[2026-05-14 23:54:43] 2026-05-15 03:53:40,562 | WARNING  | 
[2026-05-14 23:54:43] [begin log extracts]
[2026-05-14 23:54:43] - Log from pilotlog.txt -
[2026-05-14 23:54:43] 2026-05-15 03:53:40,543 | INFO     | extracted standard info from prmon json
[2026-05-14 23:54:43] 2026-05-15 03:53:40,543 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | WARNING  | found no stored workdir sizes
[2026-05-14 23:54:43] 2026-05-15 03:53:40,544 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | WARNING  | wrong length of table data, x=[1778817064.0], y=[1062.0] (must be same and length>=4)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | could have reported an average CPU frequency of 2600 MHz (4 samples)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,545 | INFO     | . Timing measurements:
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . get job = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . initial setup = 10 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload setup = 15 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-in = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . payload execution = 41 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . stage-out = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | . log creation = 0 s
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | ..............................
[2026-05-14 23:54:43] 2026-05-15 03:53:40,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:54:43] 2026-05-15 03:53:40,547 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193122/pilotlog.txt
[2026-05-14 23:54:43] [end log extracts]
[2026-05-14 23:54:43] 2026-05-15 03:53:40,562 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 23:54:43] 2026-05-15 03:53:40,563 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 23:54:43] 2026-05-15 03:53:41,101 | INFO     | 
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | job summary report
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | --------------------------------------------------
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | PanDA job id: 7139193122
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | task id: 50250192
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 03:51:31,418 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | pilot state: failed 
[2026-05-14 23:54:43] 2026-05-15 03:53:41,102 | INFO     | transexitcode: 65
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | exeerrorcode: 65
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | exitcode: 65
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | cpuconsumptiontime: 27 s
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | nevents: 0
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | neventsw: 0
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | pid: 2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | pgrp: 2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:41,103 | INFO     | corecount: 12
[2026-05-14 23:54:43] 2026-05-15 03:53:41,104 | INFO     | event service: False
[2026-05-14 23:54:43] 2026-05-15 03:53:41,104 | INFO     | sizes: {0: 2265694, 1: 2267523, 61: 2290858, 63: 2295153, 64: 2295181, 182: 2295375}
[2026-05-14 23:54:43] 2026-05-15 03:53:41,104 | INFO     | --------------------------------------------------
[2026-05-14 23:54:43] 2026-05-15 03:53:41,104 | INFO     | 
[2026-05-14 23:54:43] 2026-05-15 03:53:41,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-14 23:54:43] 2026-05-15 03:53:41,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,126 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,126 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,126 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 23:54:43] 2026-05-15 03:53:41,128 | INFO     | job 7139193122 has completed (purged errors)
[2026-05-14 23:54:43] 2026-05-15 03:53:41,129 | INFO     | overall cleanup function is called
[2026-05-14 23:54:43] 2026-05-15 03:53:42,135 | INFO     | --- collectZombieJob: --- 10, [2335800]
[2026-05-14 23:54:43] 2026-05-15 03:53:42,136 | INFO     | zombie collector waiting for pid 2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:42,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 23:54:43] 2026-05-15 03:53:42,136 | INFO     | collected zombie processes
[2026-05-14 23:54:43] 2026-05-15 03:53:42,136 | INFO     | will attempt to kill all subprocesses of pid=2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:42,484 | INFO     | process IDs to be killed: [2335800] (in reverse order)
[2026-05-14 23:54:43] 2026-05-15 03:53:42,767 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 23:54:43] 2026-05-15 03:53:42,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 23:54:43] 2026-05-15 03:53:42,781 | INFO     | did not find any defunct processes belonging to 2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:42,794 | INFO     | did not find any defunct processes belonging to 2335800
[2026-05-14 23:54:43] 2026-05-15 03:53:42,794 | INFO     | Ready for new job
[2026-05-14 23:54:43] 2026-05-15 03:53:42,796 | INFO     | ***************************************
[2026-05-14 23:54:43] 2026-05-15 03:53:42,797 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 23:54:43] 2026-05-15 03:53:42,797 | INFO     | ***************************************
[2026-05-14 23:54:43] 2026-05-15 03:53:42,797 | INFO     | 
[2026-05-14 23:54:43] 2026-05-15 03:53:42,799 | INFO     | architecture information:
[2026-05-14 23:54:43] 2026-05-15 03:53:42,799 | INFO     | executing command: cat /etc/os-release
[2026-05-14 23:54:43] 2026-05-15 03:53:42,838 | INFO     | cat /etc/os-release:
[2026-05-14 23:54:43] NAME="CentOS Linux"
[2026-05-14 23:54:43] VERSION="7 (Core)"
[2026-05-14 23:54:43] ID="centos"
[2026-05-14 23:54:43] ID_LIKE="rhel fedora"
[2026-05-14 23:54:43] VERSION_ID="7"
[2026-05-14 23:54:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 23:54:43] ANSI_COLOR="0;31"
[2026-05-14 23:54:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 23:54:43] HOME_URL="https://www.centos.org/"
[2026-05-14 23:54:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 23:54:43] 
[2026-05-14 23:54:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 23:54:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 23:54:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 23:54:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 23:54:43] 
[2026-05-14 23:54:43] 2026-05-15 03:53:42,838 | INFO     | ***************************************
[2026-05-14 23:54:43] 2026-05-15 03:53:43,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-14 23:54:43] 2026-05-15 03:53:43,375 | INFO     | sufficient remaining disk space (76828114944 B)
[2026-05-14 23:54:43] 2026-05-15 03:53:43,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 23:54:43] 2026-05-15 03:53:43,376 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 23:54:43] 2026-05-15 03:53:43,376 | INFO     | update_server=False
[2026-05-14 23:54:43] 2026-05-15 03:53:43,376 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 23:54:43] 2026-05-15 03:53:43,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:54:43] 2026-05-15 03:53:43,378 | INFO     | aborting loop
[2026-05-14 23:54:43] 2026-05-15 03:53:43,536 | INFO     | all data control threads have been joined
[2026-05-14 23:54:43] 2026-05-15 03:53:43,624 | INFO     | all payload control threads have been joined
[2026-05-14 23:54:43] 2026-05-15 03:53:44,383 | INFO     | [job] retrieve thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,383 | INFO     | [job] job monitor thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,437 | INFO     | all job control threads have been joined
[2026-05-14 23:54:43] 2026-05-15 03:53:44,541 | INFO     | [data] control thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,573 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,628 | INFO     | [payload] control thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,640 | INFO     | [data] copytool_in thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 23:54:43] 2026-05-15 03:53:44,852 | INFO     | [payload] failed_post thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:44,917 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:45,301 | INFO     | [job] validate thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:45,442 | INFO     | [job] control thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:45,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:54:43] 2026-05-15 03:53:45,686 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:45,722 | INFO     | [payload] validate_post thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:45,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 23:54:43] 2026-05-15 03:53:45,860 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:46,670 | INFO     | [job] queue monitor thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:46,823 | INFO     | [data] copytool_out thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:53:49,819 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 23:54:43] 2026-05-15 03:54:13,085 | INFO     | PID=2330746 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 23:54:43] 2026-05-15 03:54:13,085 | INFO     | .. there are 17 such processes running
[2026-05-14 23:54:43] 2026-05-15 03:54:13,086 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 23:54:43] 2026-05-15 03:54:13,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 23:54:43] 2026-05-15 03:54:13,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 23:54:43] 2026-05-15 03:54:37,091 | INFO     | [monitor] cgroup control has ended
[2026-05-14 23:54:43] 2026-05-15 03:54:37,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684636055360)>', '<ExcThread(monitor, started 140684187129600)>']
[2026-05-14 23:54:43] 2026-05-15 03:54:38,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 23:54:43] 2026-05-15 03:54:38,230 | INFO     | [monitor] control thread has ended
[2026-05-14 23:54:43] 2026-05-15 03:54:43,008 | INFO     | all workflow threads have been joined
[2026-05-14 23:54:43] 2026-05-15 03:54:43,009 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 23:54:43] 2026-05-15 03:54:43,009 | INFO     | traces error code: 0
[2026-05-14 23:54:43] 2026-05-15 03:54:43,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 23:54:43] 2026-05-15 03:54:43,226 [wrapper] ==== pilot stdout END ====
[2026-05-14 23:54:43] 2026-05-15 03:54:43,256 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 23:54:43] 2026-05-15 03:54:43,285 [wrapper] pilotpid: 2330746
[2026-05-14 23:54:43] 2026-05-15 03:54:43,293 [wrapper] Pilot exit status: 0
[2026-05-14 23:54:43] 2026-05-15 03:54:43,315 [wrapper] pandaids: 7139193122
[2026-05-14 23:54:43] 2026-05-15 03:54:43,401 [wrapper] cleanup supervisor_pilot 2330752 2330747
[2026-05-14 23:54:43] 2026-05-15 03:54:43,405 [wrapper] Test setup, not cleaning
[2026-05-14 23:54:43] 2026-05-15 03:54:43,412 [wrapper] apfmon messages muted
[2026-05-14 23:54:43] 2026-05-15 03:54:43,416 [wrapper] ==== wrapper stdout END ====
[2026-05-14 23:54:43] 2026-05-15 03:54:43,419 [wrapper] ==== wrapper stderr END ====
[2026-05-14 23:54:43]  *** Error codes and diagnostics ***
[2026-05-14 23:54:43]     "exeErrorCode": 65,
[2026-05-14 23:54:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:54:43]     "pilotErrorCode": 1305,
[2026-05-14 23:54:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:54:43]  *** Listing of results directory ***
[2026-05-14 23:54:43] total 105940
[2026-05-14 23:54:43] -rwx------. 1 boincer umatlas     36281 May 14 16:21 runpilot2-wrapper.sh
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas      5631 May 14 23:08 queuedata.json
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas    683926 May 14 23:08 pilot3.tar.gz
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas       100 May 14 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 23:54:43] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 23:50 run_atlas
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas       105 May 14 23:50 job.xml
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas 104155303 May 14 23:50 EVNT.50238157._000197.pool.root.1
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas      6567 May 14 23:50 init_data.xml
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas     15667 May 14 23:50 start_atlas.sh
[2026-05-14 23:54:43] drwxrwx--x. 2 boincer umatlas      4096 May 14 23:50 shared
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas    697450 May 14 23:50 input.tar.gz
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas         0 May 14 23:50 boinc_lockfile
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas      2557 May 14 23:50 pandaJob.out
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas        57 May 14 23:50 setup.sh.local
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas    993483 May 14 23:50 agis_schedconf.cvmfs.json
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas   1502367 May 14 23:50 agis_ddmendpoints.agis.ALL.json
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas       439 May 14 23:50 workernode_map.json
[2026-05-14 23:54:43] drwx------. 5 boincer umatlas      4096 May 14 23:50 pilot3
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas       481 May 14 23:51 boinc_task_state.xml
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas       975 May 14 23:51 memory_monitor_summary.json
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas     20681 May 14 23:51 log.50250192._026057.job.log.tgz.1
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas        95 May 14 23:53 pilot_heartbeat.json
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas      7082 May 14 23:53 heartbeat_new.json
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas      7044 May 14 23:53 heartbeat.json
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas      8192 May 14 23:54 boinc_mmap_file
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas        23 May 14 23:54 wrapper_checkpoint.txt
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas      4823 May 14 23:54 pilotlog.txt
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas     82385 May 14 23:54 log.50250192._026057.job.log.1
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas       188 May 14 23:54 output.list
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas       410 May 14 23:54 runtime_log
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas    122880 May 14 23:54 result.tar.gz
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas       636 May 14 23:54 2ec06ac6ca36.diag
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas      8798 May 14 23:54 runtime_log.err
[2026-05-14 23:54:43] -rw-r--r--. 1 boincer umatlas     21626 May 14 23:54 stderr.txt
[2026-05-14 23:54:43] No HITS result produced
[2026-05-14 23:54:43]  *** Contents of shared directory: ***
[2026-05-14 23:54:43] total 102536
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas 104155303 May 14 23:50 ATLAS.root_0
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas     15667 May 14 23:50 start_atlas.sh
[2026-05-14 23:54:43] -rw-r--r--. 2 boincer umatlas    697450 May 14 23:50 input.tar.gz
[2026-05-14 23:54:43] -rw-------. 1 boincer umatlas    122880 May 14 23:54 result.tar.gz
23:54:44 (2326846): run_atlas exited; CPU time 32.030940
23:54:44 (2326846): called boinc_finish(0)

</stderr_txt>
]]>

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