Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-15 05:37:28 (5312): vboxwrapper version 26210
2026-05-15 05:37:28 (5312): BOINC client version: 8.2.8
2026-05-15 05:37:29 (5312): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-05-15 05:37:29 (5312): Successfully copied 'init_data.xml' to the shared directory.
2026-05-15 05:37:29 (5312): Create VM. (boinc_46fc9e4815867b4c, slot#1)
2026-05-15 05:37:30 (5312): Setting Memory Size for VM. (4200MB)
2026-05-15 05:37:30 (5312): Setting CPU Count for VM. (2)
2026-05-15 05:37:30 (5312): Setting Chipset Options for VM.
2026-05-15 05:37:30 (5312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-15 05:37:31 (5312): Setting Boot Options for VM.
2026-05-15 05:37:31 (5312): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-15 05:37:31 (5312): Enabling VM Network Access.
2026-05-15 05:37:32 (5312): Disabling USB Support for VM.
2026-05-15 05:37:32 (5312): Disabling COM Port Support for VM.
2026-05-15 05:37:32 (5312): Disabling LPT Port Support for VM.
2026-05-15 05:37:32 (5312): Disabling Audio Support for VM.
2026-05-15 05:37:33 (5312): Disabling Clipboard Support for VM.
2026-05-15 05:37:33 (5312): Disabling Drag and Drop Support for VM.
2026-05-15 05:37:33 (5312): Adding storage controller(s) to VM.
2026-05-15 05:37:34 (5312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-15 05:37:34 (5312): Adding VirtualBox Guest Additions to VM.
2026-05-15 05:37:34 (5312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-15 05:37:35 (5312): forwarding host port 55012 to guest port 80
2026-05-15 05:37:35 (5312): Enabling remote desktop for VM.
2026-05-15 05:37:35 (5312): Required extension pack not installed, remote desktop not enabled.
2026-05-15 05:37:35 (5312): Enabling shared directory for VM.
2026-05-15 05:37:36 (5312): Starting VM using VBoxManage interface. (boinc_46fc9e4815867b4c, slot#1)
2026-05-15 05:37:42 (5312): Successfully started VM. (PID = '4936')
2026-05-15 05:37:42 (5312): Reporting VM Process ID to BOINC.
2026-05-15 05:37:42 (5312): Guest Log: BIOS: VirtualBox 7.0.6
2026-05-15 05:37:42 (5312): Guest Log: CPUID EDX: 0x178bfbff
2026-05-15 05:37:42 (5312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-15 05:37:42 (5312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-15 05:37:42 (5312): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-15 05:37:42 (5312): Detected: Web Application Enabled (http://localhost:55012)
2026-05-15 05:37:42 (5312): Preference change detected
2026-05-15 05:37:42 (5312): Setting CPU throttle for VM. (100%)
2026-05-15 05:37:42 (5312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-15 05:37:44 (5312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-15 05:37:44 (5312): Guest Log: BIOS: Booting from Hard Disk...
2026-05-15 05:37:47 (5312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-15 05:37:47 (5312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-15 05:37:47 (5312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-15 05:37:51 (5312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-15 05:37:51 (5312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-15 05:37:59 (5312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000143 main     Log opened 2026-05-15T05:37:57.311256000Z
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000241 main     OS Product: Linux
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000276 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000305 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000333 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000334 main     Process ID: 1265
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.000335 main     Package type: LINUX_64BITS_GENERIC
2026-05-15 05:37:59 (5312): Guest Log: 00:00:00.001539 main     5.2.32 r132073 started. Verbose level = 0
2026-05-15 05:37:59 (5312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-15 05:37:59 (5312): Guest Log: [INFO] Mounting shared directory
2026-05-15 05:37:59 (5312): Guest Log: [INFO] Checking for init_data.xml
2026-05-15 05:38:03 (5312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-15 05:38:03 (5312): Guest Log: [INFO] Detected branch: prod
2026-05-15 05:38:03 (5312): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-15 05:38:03 (5312): Guest Log: Copying input files
2026-05-15 05:38:04 (5312): Guest Log: Copied input files into RunAtlas.
2026-05-15 05:38:04 (5312): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-15 05:38:04 (5312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-15 05:38:04 (5312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-15 05:38:04 (5312): Guest Log: Further information can be found at the LHC@home message board.
2026-05-15 05:38:09 (5312): Guest Log: 00:00:10.006165 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 671 828 000ns (GuestNow=1 778 816 288 645 201 000 ns GuestLast=1 778 823 477 317 029 000 ns fSetTimeLastLoop=true )
2026-05-15 05:38:12 (5312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-15 05:38:12 (5312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-15 05:38:12 (5312): Guest Log: 2.6.3.0 1539 0 32096 159525 4 1 3117651 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-15 05:38:13 (5312): Guest Log: copied the webapp to /var/www
2026-05-15 05:38:13 (5312): Guest Log: ATHENA_PROC_NUMBER=2
2026-05-15 05:38:13 (5312): Guest Log: ATHENA_CORE_NUMBER=2
2026-05-15 05:38:13 (5312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-15 05:38:13 (5312): Guest Log:  *** Starting ATLAS job. (PandaID=7139191165 taskID=50250192) ***
2026-05-15 05:43:20 (5312): Guest Log:  *** Job finished ***
2026-05-15 05:43:20 (5312): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:01,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:01,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:14,220 | INFO     | [monitor] cgroup control has ended
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:14,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075047597888)>', '<ExcThread(monitor, started 140074301773568)>']
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:15,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:15,631 | INFO     | [monitor] control thread has ended
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,686 | INFO     | all workflow threads have been joined
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,687 | INFO     | end of generic workflow (traces error code: 0)
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,687 | INFO     | traces error code: 0
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,774 [wrapper] ==== pilot stdout END ====
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,780 [wrapper] ==== wrapper stdout RESUME ====
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,786 [wrapper] pilotpid: 5917
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,791 [wrapper] Pilot exit status: 0
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,938 [wrapper] pandaids: 7139191165
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,970 [wrapper] cleanup supervisor_pilot  5923 5918
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,975 [wrapper] Test setup, not cleaning
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,979 [wrapper] apfmon messages muted
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,983 [wrapper] ==== wrapper stdout END ====
2026-05-15 05:43:20 (5312): Guest Log: 2026-05-15 03:43:19,987 [wrapper] ==== wrapper stderr END ====
2026-05-15 05:43:20 (5312): Guest Log:  *** Error codes and diagnostics ***
2026-05-15 05:43:20 (5312): Guest Log:     "exeErrorCode": 65,
2026-05-15 05:43:20 (5312): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-05-15 05:43:20 (5312): Guest Log:     "pilotErrorCode": 1305,
2026-05-15 05:43:20 (5312): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-05-15 05:43:20 (5312): Guest Log:  *** Listing of results directory ***
2026-05-15 05:43:20 (5312): Guest Log: total 4140
2026-05-15 05:43:20 (5312): Guest Log: -rwx------. 1 atlas atlas   36281 May 14 20:18 runpilot2-wrapper.sh
2026-05-15 05:43:20 (5312): Guest Log: -rw-r--r--. 1 atlas atlas    5631 May 15 02:08 queuedata.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-r--r--. 1 atlas atlas  683926 May 15 02:08 pilot3.tar.gz
2026-05-15 05:43:20 (5312): Guest Log: -rwxr-xr-x. 1 atlas atlas    8965 May 15 03:38 init_data.xml
2026-05-15 05:43:20 (5312): Guest Log: -rwxr-xr-x. 1 atlas atlas  697446 May 15 03:38 input.tar.gz
2026-05-15 05:43:20 (5312): Guest Log: -rwxr-xr-x. 1 atlas atlas   15667 May 15 03:38 start_atlas.sh
2026-05-15 05:43:20 (5312): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 15 03:38 EVNT.50238157._000157.pool.root.1 -> /data/./ATLAS.root_0
2026-05-15 05:43:20 (5312): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 15 03:38 pandaJob.out
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas  993483 May 15 03:39 agis_schedconf.cvmfs.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas 1502367 May 15 03:39 agis_ddmendpoints.agis.ALL.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas     427 May 15 03:39 workernode_map.json
2026-05-15 05:43:20 (5312): Guest Log: drwx------. 5 atlas atlas    4096 May 15 03:39 pilot3
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas     957 May 15 03:40 memory_monitor_summary.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas   20374 May 15 03:40 log.50250192._025782.job.log.tgz.1
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas      95 May 15 03:42 pilot_heartbeat.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas    7124 May 15 03:42 heartbeat_new.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas    7086 May 15 03:42 heartbeat.json
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas    4990 May 15 03:43 pilotlog.txt
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas   76459 May 15 03:43 log.50250192._025782.job.log.1
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas     188 May 15 03:43 output.list
2026-05-15 05:43:20 (5312): Guest Log: -rw-r--r--. 1 atlas atlas     410 May 15 03:43 runtime_log
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas  112640 May 15 03:43 result.tar.gz
2026-05-15 05:43:20 (5312): Guest Log: -rw-r--r--. 1 atlas atlas    8236 May 15 03:43 runtime_log.err
2026-05-15 05:43:20 (5312): Guest Log: -rw-------. 1 atlas atlas     648 May 15 03:43 2e175bd7c3cf.diag
2026-05-15 05:43:20 (5312): Guest Log: Looking for outputfile HITS.50250192._025782.pool.root.1
2026-05-15 05:43:20 (5312): Guest Log: No HITS file was produced
2026-05-15 05:43:20 (5312): Guest Log: Successfully finished the ATLAS job!
2026-05-15 05:43:20 (5312): Guest Log: Copying the results back to the shared directory!
2026-05-15 05:43:20 (5312): Guest Log:  *** Contents of shared directory: ***
2026-05-15 05:43:20 (5312): Guest Log: total 101064
2026-05-15 05:43:20 (5312): Guest Log: -rwxrwxrwx. 1 root root 102643751 May 15 03:37 ATLAS.root_0
2026-05-15 05:43:20 (5312): Guest Log: -rwxrwxrwx. 1 root root      8965 May 15 03:37 init_data.xml
2026-05-15 05:43:20 (5312): Guest Log: -rwxrwxrwx. 1 root root    697446 May 15 03:36 input.tar.gz
2026-05-15 05:43:20 (5312): Guest Log: -rwxrwxrwx. 1 root root    112640 May 15 03:43 result.tar.gz
2026-05-15 05:43:20 (5312): Guest Log: -rwxrwxrwx. 1 root root     15667 May 15 03:36 start_atlas.sh
2026-05-15 05:43:20 (5312): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-15 05:43:20 (5312): VM Completion File Detected.
2026-05-15 05:43:20 (5312): Powering off VM.
2026-05-15 05:43:21 (5312): Successfully stopped VM.
2026-05-15 05:43:21 (5312): Deregistering VM. (boinc_46fc9e4815867b4c, slot#1)
2026-05-15 05:43:21 (5312): Removing network bandwidth throttle group from VM.
2026-05-15 05:43:21 (5312): Removing VM from VirtualBox.
2026-05-15 05:43:27 (5312): called boinc_finish(0)

</stderr_txt>
]]>

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