Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:41 (1936009): wrapper (7.7.26015): starting
00:01:41 (1936009): wrapper: running run_atlas (--nthreads 8)
[2026-05-15 00:01:41] Arguments: --nthreads 8
[2026-05-15 00:01:41] Threads: 8
[2026-05-15 00:01:41] Checking for CVMFS
[2026-05-15 00:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 00:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 00:01:41] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 00:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 00:01:42] 2.13.3.0 8991 20929 381528 159527 1 404 29391923 39288832 10642 16776704 0 47980567 99.289 84858946 30398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-15 00:01:42] CVMFS is ok
[2026-05-15 00:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-15 00:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-15 00:01:42] Further information can be found at the LHC@home message board.
[2026-05-15 00:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 00:01:42] Checking for apptainer binary...
[2026-05-15 00:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 00:01:42] Running /usr/bin/apptainer --version
[2026-05-15 00:01:42] apptainer version 1.4.5-3.el9
[2026-05-15 00:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 00:01:42] c-211-22.aglt2.org
[2026-05-15 00:01:42] apptainer works
[2026-05-15 00:01:42] Set ATHENA_PROC_NUMBER=8
[2026-05-15 00:01:42] Set ATHENA_CORE_NUMBER=8
[2026-05-15 00:01:42] Starting ATLAS job with PandaID=7139223350
[2026-05-15 00:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 00:07:57]  *** The last 200 lines of the pilot log: ***
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | WARNING  | wrong length of table data, x=[1778817842.0, 1778817903.0], y=[987.0, 473655.0] (must be same and length>=4)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . Timing measurements:
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . get job = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . initial setup = 22 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . payload setup = 50 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-in = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . payload execution = 80 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-out = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . log creation = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:07:57] 2026-05-15 04:07:09,786 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7139223350/pilotlog.txt
[2026-05-15 00:07:57] 2026-05-15 04:07:09,963 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 00:07:57] - Log from pilotlog.txt -
[2026-05-15 00:07:57] 2026-05-15 04:07:09,732 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 00:07:57] 2026-05-15 04:07:09,756 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7139223350/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,757 | INFO     | extracted standard info from prmon json
[2026-05-15 00:07:57] 2026-05-15 04:07:09,757 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | WARNING  | wrong length of table data, x=[1778817842.0, 1778817903.0], y=[987.0, 473655.0] (must be same and length>=4)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . Timing measurements:
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . get job = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . initial setup = 22 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . payload setup = 50 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-in = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . payload execution = 80 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-out = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . log creation = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:07:57] 2026-05-15 04:07:09,786 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7139223350/pilotlog.txt
[2026-05-15 00:07:57] 2026-05-15 04:07:09,963 | WARNING  | 
[2026-05-15 00:07:57] [begin log extracts]
[2026-05-15 00:07:57] - Log from pilotlog.txt -
[2026-05-15 00:07:57] 2026-05-15 04:07:09,732 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 00:07:57] 2026-05-15 04:07:09,756 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7139223350/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,757 | INFO     | extracted standard info from prmon json
[2026-05-15 00:07:57] 2026-05-15 04:07:09,757 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 00:07:57] 2026-05-15 04:07:09,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | WARNING  | wrong length of table data, x=[1778817842.0, 1778817903.0], y=[987.0, 473655.0] (must be same and length>=4)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,783 | INFO     | could have reported an average CPU frequency of 2899 MHz (4 samples)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . Timing measurements:
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . get job = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . initial setup = 22 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,784 | INFO     | . payload setup = 50 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-in = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . payload execution = 80 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . stage-out = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | . log creation = 0 s
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | ..............................
[2026-05-15 00:07:57] 2026-05-15 04:07:09,785 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:07:57] 2026-05-15 04:07:09,786 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-7139223350/pilotlog.txt
[2026-05-15 00:07:57] [end log extracts]
[2026-05-15 00:07:57] 2026-05-15 04:07:09,963 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 00:07:57] 2026-05-15 04:07:09,964 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 00:07:57] 2026-05-15 04:07:11,127 | INFO     | 
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | job summary report
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | --------------------------------------------------
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | PanDA job id: 7139223350
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | task id: 50250192
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 04:04:57,098 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 00:07:57] 2026-05-15 04:07:11,128 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | pilot state: failed 
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | transexitcode: 65
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | exeerrorcode: 65
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | exitcode: 65
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 00:07:57] 2026-05-15 04:07:11,129 | INFO     | cpuconsumptiontime: 34 s
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | nevents: 0
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | neventsw: 0
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | pid: 1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | pgrp: 1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | corecount: 8
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | event service: False
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | sizes: {0: 2265699, 1: 2267528, 2: 2267556, 135: 2291035, 136: 2291011, 138: 2295334, 140: 2295490, 258: 2295656}
[2026-05-15 00:07:57] 2026-05-15 04:07:11,130 | INFO     | --------------------------------------------------
[2026-05-15 00:07:57] 2026-05-15 04:07:11,131 | INFO     | 
[2026-05-15 00:07:57] 2026-05-15 04:07:11,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-15 00:07:57] 2026-05-15 04:07:11,476 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,476 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,476 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,479 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 00:07:57] 2026-05-15 04:07:11,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,479 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 00:07:57] 2026-05-15 04:07:11,479 | INFO     | job 7139223350 has completed (purged errors)
[2026-05-15 00:07:57] 2026-05-15 04:07:11,480 | INFO     | overall cleanup function is called
[2026-05-15 00:07:57] 2026-05-15 04:07:12,508 | INFO     | --- collectZombieJob: --- 10, [1961826]
[2026-05-15 00:07:57] 2026-05-15 04:07:12,509 | INFO     | zombie collector waiting for pid 1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:12,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 00:07:57] 2026-05-15 04:07:12,509 | INFO     | collected zombie processes
[2026-05-15 00:07:57] 2026-05-15 04:07:12,509 | INFO     | will attempt to kill all subprocesses of pid=1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:15,339 | INFO     | PID=1948487 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-15 00:07:57] 2026-05-15 04:07:15,339 | INFO     | .. there are 15 such processes running
[2026-05-15 00:07:57] 2026-05-15 04:07:15,379 | INFO     | process IDs to be killed: [1961826] (in reverse order)
[2026-05-15 00:07:57] 2026-05-15 04:07:16,582 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 00:07:57] 2026-05-15 04:07:16,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 00:07:57] 2026-05-15 04:07:16,797 | INFO     | did not find any defunct processes belonging to 1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:17,042 | INFO     | did not find any defunct processes belonging to 1961826
[2026-05-15 00:07:57] 2026-05-15 04:07:17,043 | INFO     | Ready for new job
[2026-05-15 00:07:57] 2026-05-15 04:07:17,100 | INFO     | ***************************************
[2026-05-15 00:07:57] 2026-05-15 04:07:17,100 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 00:07:57] 2026-05-15 04:07:17,100 | INFO     | ***************************************
[2026-05-15 00:07:57] 2026-05-15 04:07:17,100 | INFO     | 
[2026-05-15 00:07:57] 2026-05-15 04:07:17,147 | INFO     | architecture information:
[2026-05-15 00:07:57] 2026-05-15 04:07:17,151 | INFO     | executing command: cat /etc/os-release
[2026-05-15 00:07:57] 2026-05-15 04:07:17,340 | INFO     | cat /etc/os-release:
[2026-05-15 00:07:57] NAME="CentOS Linux"
[2026-05-15 00:07:57] VERSION="7 (Core)"
[2026-05-15 00:07:57] ID="centos"
[2026-05-15 00:07:57] ID_LIKE="rhel fedora"
[2026-05-15 00:07:57] VERSION_ID="7"
[2026-05-15 00:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 00:07:57] ANSI_COLOR="0;31"
[2026-05-15 00:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 00:07:57] HOME_URL="https://www.centos.org/"
[2026-05-15 00:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 00:07:57] 
[2026-05-15 00:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 00:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 00:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 00:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 00:07:57] 
[2026-05-15 00:07:57] 2026-05-15 04:07:17,340 | INFO     | ***************************************
[2026-05-15 00:07:57] 2026-05-15 04:07:17,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-15 00:07:57] 2026-05-15 04:07:18,053 | INFO     | sufficient remaining disk space (53574893568 B)
[2026-05-15 00:07:57] 2026-05-15 04:07:18,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 00:07:57] 2026-05-15 04:07:18,054 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 00:07:57] 2026-05-15 04:07:18,054 | INFO     | update_server=False
[2026-05-15 00:07:57] 2026-05-15 04:07:18,069 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 00:07:57] 2026-05-15 04:07:18,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 00:07:57] 2026-05-15 04:07:18,069 | INFO     | aborting loop
[2026-05-15 00:07:57] 2026-05-15 04:07:18,615 | INFO     | all data control threads have been joined
[2026-05-15 00:07:57] 2026-05-15 04:07:19,075 | INFO     | [job] retrieve thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,081 | INFO     | [job] job monitor thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 00:07:57] 2026-05-15 04:07:19,443 | INFO     | all payload control threads have been joined
[2026-05-15 00:07:57] 2026-05-15 04:07:19,464 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,464 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,622 | INFO     | [data] control thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,657 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:19,668 | INFO     | all job control threads have been joined
[2026-05-15 00:07:57] 2026-05-15 04:07:20,112 | INFO     | [payload] failed_post thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 00:07:57] 2026-05-15 04:07:20,417 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,426 | INFO     | [payload] validate_post thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,450 | INFO     | [payload] control thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,511 | INFO     | [data] copytool_in thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,515 | INFO     | [job] validate thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:20,674 | INFO     | [job] control thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:21,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 00:07:57] 2026-05-15 04:07:21,209 | INFO     | [job] queue monitor thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:21,412 | INFO     | [data] copytool_out thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:25,180 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 00:07:57] 2026-05-15 04:07:49,168 | INFO     | PID=1948487 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-15 00:07:57] 2026-05-15 04:07:49,169 | INFO     | .. there are 16 such processes running
[2026-05-15 00:07:57] 2026-05-15 04:07:49,180 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 00:07:57] 2026-05-15 04:07:49,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 00:07:57] 2026-05-15 04:07:49,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 00:07:57] 2026-05-15 04:07:50,555 | INFO     | [monitor] cgroup control has ended
[2026-05-15 00:07:57] 2026-05-15 04:07:51,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186703079232)>', '<ExcThread(monitor, started 140186189035264)>']
[2026-05-15 00:07:57] 2026-05-15 04:07:52,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 00:07:57] 2026-05-15 04:07:52,198 | INFO     | [monitor] control thread has ended
[2026-05-15 00:07:57] 2026-05-15 04:07:56,453 | INFO     | all workflow threads have been joined
[2026-05-15 00:07:57] 2026-05-15 04:07:56,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 00:07:57] 2026-05-15 04:07:56,454 | INFO     | traces error code: 0
[2026-05-15 00:07:57] 2026-05-15 04:07:56,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 00:07:57] 2026-05-15 04:07:56,876 [wrapper] ==== pilot stdout END ====
[2026-05-15 00:07:57] 2026-05-15 04:07:56,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 00:07:57] 2026-05-15 04:07:56,892 [wrapper] pilotpid: 1948487
[2026-05-15 00:07:57] 2026-05-15 04:07:56,920 [wrapper] Pilot exit status: 0
[2026-05-15 00:07:57] 2026-05-15 04:07:56,971 [wrapper] pandaids: 7139223350
[2026-05-15 00:07:57] 2026-05-15 04:07:57,143 [wrapper] cleanup supervisor_pilot 1948506 1948488
[2026-05-15 00:07:57] 2026-05-15 04:07:57,154 [wrapper] Test setup, not cleaning
[2026-05-15 00:07:57] 2026-05-15 04:07:57,164 [wrapper] apfmon messages muted
[2026-05-15 00:07:57] 2026-05-15 04:07:57,172 [wrapper] ==== wrapper stdout END ====
[2026-05-15 00:07:57] 2026-05-15 04:07:57,193 [wrapper] ==== wrapper stderr END ====
[2026-05-15 00:07:57]  *** Error codes and diagnostics ***
[2026-05-15 00:07:57]     "exeErrorCode": 65,
[2026-05-15 00:07:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 00:07:57]     "pilotErrorCode": 1305,
[2026-05-15 00:07:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 00:07:57]  *** Listing of results directory ***
[2026-05-15 00:07:57] total 104856
[2026-05-15 00:07:57] -rwx------. 1 boincer umatlas     36281 May 14 17:08 runpilot2-wrapper.sh
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas      5631 May 14 23:08 queuedata.json
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas    683926 May 14 23:08 pilot3.tar.gz
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas       100 May 15 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 00:07:57] -rwxr-xr-x. 1 boincer umatlas      7986 May 15 00:01 run_atlas
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas       105 May 15 00:01 job.xml
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas 103039659 May 15 00:01 EVNT.50238157._000366.pool.root.1
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas      6433 May 15 00:01 init_data.xml
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas     15667 May 15 00:01 start_atlas.sh
[2026-05-15 00:07:57] drwxrwx--x. 2 boincer umatlas      4096 May 15 00:01 shared
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas    697447 May 15 00:01 input.tar.gz
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas         0 May 15 00:01 boinc_lockfile
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas      2559 May 15 00:01 pandaJob.out
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas        57 May 15 00:01 setup.sh.local
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas    993483 May 15 00:02 agis_schedconf.cvmfs.json
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas   1502367 May 15 00:02 agis_ddmendpoints.agis.ALL.json
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas       442 May 15 00:02 workernode_map.json
[2026-05-15 00:07:57] drwx------. 5 boincer umatlas      4096 May 15 00:02 pilot3
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas       483 May 15 00:05 boinc_task_state.xml
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas      1002 May 15 00:05 memory_monitor_summary.json
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas     21390 May 15 00:05 log.50250192._028504.job.log.tgz.1
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas      7114 May 15 00:07 heartbeat_new.json
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas      7076 May 15 00:07 heartbeat.json
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas        95 May 15 00:07 pilot_heartbeat.json
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas      8192 May 15 00:07 boinc_mmap_file
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas        23 May 15 00:07 wrapper_checkpoint.txt
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas      4823 May 15 00:07 pilotlog.txt
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas     87734 May 15 00:07 log.50250192._028504.job.log.1
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas       188 May 15 00:07 output.list
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas       410 May 15 00:07 runtime_log
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas    122880 May 15 00:07 result.tar.gz
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas      8811 May 15 00:07 runtime_log.err
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas       639 May 15 00:07 39b291446652.diag
[2026-05-15 00:07:57] -rw-r--r--. 1 boincer umatlas     22013 May 15 00:07 stderr.txt
[2026-05-15 00:07:57] No HITS result produced
[2026-05-15 00:07:57]  *** Contents of shared directory: ***
[2026-05-15 00:07:57] total 101448
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas 103039659 May 15 00:01 ATLAS.root_0
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas     15667 May 15 00:01 start_atlas.sh
[2026-05-15 00:07:57] -rw-r--r--. 2 boincer umatlas    697447 May 15 00:01 input.tar.gz
[2026-05-15 00:07:57] -rw-------. 1 boincer umatlas    122880 May 15 00:07 result.tar.gz
00:07:59 (1936009): run_atlas exited; CPU time 44.486063
00:07:59 (1936009): called boinc_finish(0)

</stderr_txt>
]]>

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