Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:48:47 (4872): wrapper (7.7.26015): starting
04:48:47 (4872): wrapper: running run_atlas (--nthreads 4)
[2026-05-15 04:48:47] Arguments: --nthreads 4
[2026-05-15 04:48:47] Threads: 4
[2026-05-15 04:48:47] Checking for CVMFS
[2026-05-15 04:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 04:49:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 04:49:04] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 04:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 04:49:05] 2.12.7.0 5095 0 25220 159527 3 1 2416399 4194305 0 130560 0 0 0.000 1283 475 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-15 04:49:05] CVMFS is ok
[2026-05-15 04:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 04:49:05] Checking for apptainer binary...
[2026-05-15 04:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 04:49:05] Running /usr/bin/apptainer --version
[2026-05-15 04:49:05] apptainer version 1.0.3
[2026-05-15 04:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 04:49:06] TeeC04
[2026-05-15 04:49:06] apptainer works
[2026-05-15 04:49:06] Set ATHENA_PROC_NUMBER=4
[2026-05-15 04:49:06] Set ATHENA_CORE_NUMBER=4
[2026-05-15 04:49:06] Starting ATLAS job with PandaID=7139193856
[2026-05-15 04:49:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 04:53:49]  *** The last 200 lines of the pilot log: ***
[2026-05-15 04:53:49] 2026-05-15 03:53:01,339 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard info from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:53:49] 2026-05-15 03:53:01,342 | WARNING  | wrong length of table data, x=[1778817004.0], y=[1165.0] (must be same and length>=4)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . Timing measurements:
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . get job = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . initial setup = 22 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload setup = 7 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-in = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload execution = 60 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-out = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . log creation = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/pilotlog.txt
[2026-05-15 04:53:49] 2026-05-15 03:53:01,361 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 04:53:49] - Log from pilotlog.txt -
[2026-05-15 04:53:49] 2026-05-15 03:53:01,317 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 04:53:49] 2026-05-15 03:53:01,339 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard info from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:53:49] 2026-05-15 03:53:01,342 | WARNING  | wrong length of table data, x=[1778817004.0], y=[1165.0] (must be same and length>=4)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . Timing measurements:
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . get job = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . initial setup = 22 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload setup = 7 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-in = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload execution = 60 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-out = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . log creation = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/pilotlog.txt
[2026-05-15 04:53:49] 2026-05-15 03:53:01,362 | WARNING  | 
[2026-05-15 04:53:49] [begin log extracts]
[2026-05-15 04:53:49] - Log from pilotlog.txt -
[2026-05-15 04:53:49] 2026-05-15 03:53:01,317 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 04:53:49] 2026-05-15 03:53:01,339 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard info from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,340 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 04:53:49] 2026-05-15 03:53:01,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:53:49] 2026-05-15 03:53:01,342 | WARNING  | wrong length of table data, x=[1778817004.0], y=[1165.0] (must be same and length>=4)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | could have reported an average CPU frequency of 3200 MHz (4 samples)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . Timing measurements:
[2026-05-15 04:53:49] 2026-05-15 03:53:01,343 | INFO     | . get job = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . initial setup = 22 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload setup = 7 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-in = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . payload execution = 60 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . stage-out = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,344 | INFO     | . log creation = 0 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | ..............................
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:53:49] 2026-05-15 03:53:01,345 | INFO     | executing command: tail -n 20 /home/m/BOINC/slots/0/PanDA_Pilot-7139193856/pilotlog.txt
[2026-05-15 04:53:49] [end log extracts]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,362 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,363 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | 
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | job summary report
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | --------------------------------------------------
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | PanDA job id: 7139193856
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | task id: 50250192
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 04:50:57,711 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | pilot state: failed 
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | transexitcode: 65
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | exeerrorcode: 65
[2026-05-15 04:53:49] 2026-05-15 03:53:01,417 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | exitcode: 65
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | cpuconsumptiontime: 18 s
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | nevents: 0
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | neventsw: 0
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | pid: 13560
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | pgrp: 13560
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | corecount: 4
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | event service: False
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | sizes: {0: 2267499, 11: 2267499, 71: 2290686, 73: 2295068, 188: 2295206}
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | --------------------------------------------------
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | 
[2026-05-15 04:53:49] 2026-05-15 03:53:01,418 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-15 04:53:49] 2026-05-15 03:53:01,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | job 7139193856 has completed (purged errors)
[2026-05-15 04:53:49] 2026-05-15 03:53:01,431 | INFO     | overall cleanup function is called
[2026-05-15 04:53:49] 2026-05-15 03:53:02,438 | INFO     | --- collectZombieJob: --- 10, [13560]
[2026-05-15 04:53:49] 2026-05-15 03:53:02,438 | INFO     | zombie collector waiting for pid 13560
[2026-05-15 04:53:49] 2026-05-15 03:53:02,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 04:53:49] 2026-05-15 03:53:02,439 | INFO     | collected zombie processes
[2026-05-15 04:53:49] 2026-05-15 03:53:02,439 | INFO     | will attempt to kill all subprocesses of pid=13560
[2026-05-15 04:53:49] 2026-05-15 03:53:02,491 | INFO     | process IDs to be killed: [13560] (in reverse order)
[2026-05-15 04:53:49] 2026-05-15 03:53:02,521 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 04:53:49] 2026-05-15 03:53:02,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 04:53:49] 2026-05-15 03:53:02,522 | INFO     | did not find any defunct processes belonging to 13560
[2026-05-15 04:53:49] 2026-05-15 03:53:02,524 | INFO     | did not find any defunct processes belonging to 13560
[2026-05-15 04:53:49] 2026-05-15 03:53:02,524 | INFO     | Ready for new job
[2026-05-15 04:53:49] 2026-05-15 03:53:02,525 | INFO     | ***************************************
[2026-05-15 04:53:49] 2026-05-15 03:53:02,525 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 04:53:49] 2026-05-15 03:53:02,525 | INFO     | ***************************************
[2026-05-15 04:53:49] 2026-05-15 03:53:02,525 | INFO     | 
[2026-05-15 04:53:49] 2026-05-15 03:53:02,545 | INFO     | architecture information:
[2026-05-15 04:53:49] 2026-05-15 03:53:02,545 | INFO     | executing command: cat /etc/os-release
[2026-05-15 04:53:49] 2026-05-15 03:53:02,553 | INFO     | cat /etc/os-release:
[2026-05-15 04:53:49] NAME="CentOS Linux"
[2026-05-15 04:53:49] VERSION="7 (Core)"
[2026-05-15 04:53:49] ID="centos"
[2026-05-15 04:53:49] ID_LIKE="rhel fedora"
[2026-05-15 04:53:49] VERSION_ID="7"
[2026-05-15 04:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 04:53:49] ANSI_COLOR="0;31"
[2026-05-15 04:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 04:53:49] HOME_URL="https://www.centos.org/"
[2026-05-15 04:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 04:53:49] 
[2026-05-15 04:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 04:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 04:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 04:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 04:53:49] 
[2026-05-15 04:53:49] 2026-05-15 03:53:02,553 | INFO     | ***************************************
[2026-05-15 04:53:49] 2026-05-15 03:53:03,057 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-15 04:53:49] 2026-05-15 03:53:03,068 | INFO     | sufficient remaining disk space (432854269952 B)
[2026-05-15 04:53:49] 2026-05-15 03:53:03,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 04:53:49] 2026-05-15 03:53:03,069 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 04:53:49] 2026-05-15 03:53:03,069 | INFO     | update_server=False
[2026-05-15 04:53:49] 2026-05-15 03:53:03,069 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 04:53:49] 2026-05-15 03:53:03,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 04:53:49] 2026-05-15 03:53:03,124 | INFO     | all data control threads have been joined
[2026-05-15 04:53:49] 2026-05-15 03:53:03,628 | INFO     | all job control threads have been joined
[2026-05-15 04:53:49] 2026-05-15 03:53:03,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 04:53:49] 2026-05-15 03:53:03,792 | INFO     | aborting loop
[2026-05-15 04:53:49] 2026-05-15 03:53:03,948 | INFO     | all payload control threads have been joined
[2026-05-15 04:53:49] 2026-05-15 03:53:04,073 | INFO     | [job] retrieve thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,074 | INFO     | [job] queue monitor thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,129 | INFO     | [data] control thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,243 | INFO     | [payload] failed_post thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,269 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 04:53:49] 2026-05-15 03:53:04,634 | INFO     | [job] control thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,798 | INFO     | [job] job monitor thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 04:53:49] 2026-05-15 03:53:04,801 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,911 | INFO     | [payload] validate_post thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,954 | INFO     | [payload] control thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:04,965 | INFO     | [job] validate thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:05,065 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:05,153 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:05,300 | INFO     | [data] copytool_in thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:06,314 | INFO     | [data] copytool_out thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:08,808 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 04:53:49] 2026-05-15 03:53:33,125 | INFO     | PID=9179 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-15 04:53:49] 2026-05-15 03:53:33,126 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 04:53:49] 2026-05-15 03:53:33,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 04:53:49] 2026-05-15 03:53:33,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 04:53:49] 2026-05-15 03:53:42,173 | INFO     | [monitor] cgroup control has ended
[2026-05-15 04:53:49] 2026-05-15 03:53:43,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844536379200)>', '<ExcThread(monitor, started 139843866720000)>']
[2026-05-15 04:53:49] 2026-05-15 03:53:44,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 04:53:49] 2026-05-15 03:53:44,184 | INFO     | [monitor] control thread has ended
[2026-05-15 04:53:49] 2026-05-15 03:53:48,957 | INFO     | all workflow threads have been joined
[2026-05-15 04:53:49] 2026-05-15 03:53:48,957 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 04:53:49] 2026-05-15 03:53:48,958 | INFO     | traces error code: 0
[2026-05-15 04:53:49] 2026-05-15 03:53:48,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 04:53:49] 2026-05-15 03:53:49,034 [wrapper] ==== pilot stdout END ====
[2026-05-15 04:53:49] 2026-05-15 03:53:49,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 04:53:49] 2026-05-15 03:53:49,038 [wrapper] pilotpid: 9179
[2026-05-15 04:53:49] 2026-05-15 03:53:49,040 [wrapper] Pilot exit status: 0
[2026-05-15 04:53:49] 2026-05-15 03:53:49,060 [wrapper] pandaids: 7139193856
[2026-05-15 04:53:49] 2026-05-15 03:53:49,076 [wrapper] cleanup supervisor_pilot    9185 9180
[2026-05-15 04:53:49] 2026-05-15 03:53:49,078 [wrapper] Test setup, not cleaning
[2026-05-15 04:53:49] 2026-05-15 03:53:49,080 [wrapper] apfmon messages muted
[2026-05-15 04:53:49] 2026-05-15 03:53:49,082 [wrapper] ==== wrapper stdout END ====
[2026-05-15 04:53:49] 2026-05-15 03:53:49,084 [wrapper] ==== wrapper stderr END ====
[2026-05-15 04:53:49]  *** Error codes and diagnostics ***
[2026-05-15 04:53:49]     "exeErrorCode": 65,
[2026-05-15 04:53:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 04:53:49]     "pilotErrorCode": 1305,
[2026-05-15 04:53:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 04:53:49]  *** Listing of results directory ***
[2026-05-15 04:53:49] total 104292
[2026-05-15 04:53:49] -rwx------ 1 m m     36281 May 14 21:22 runpilot2-wrapper.sh
[2026-05-15 04:53:49] -rw-r--r-- 1 m m      5631 May 15 04:08 queuedata.json
[2026-05-15 04:53:49] -rw-r--r-- 1 m m    683926 May 15 04:08 pilot3.tar.gz
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m       100 May 15 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 04:53:49] -rwxr-xr-x 1 m m      7986 May 15 04:48 run_atlas
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m       105 May 15 04:48 job.xml
[2026-05-15 04:53:49] -rw-r--r-- 2 m m     15667 May 15 04:48 start_atlas.sh
[2026-05-15 04:53:49] drwxrwx--x 2 m m      4096 May 15 04:48 shared
[2026-05-15 04:53:49] -rw-r--r-- 2 m m    697448 May 15 04:48 input.tar.gz
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m      5872 May 15 04:48 init_data.xml
[2026-05-15 04:53:49] -rw-r--r-- 2 m m 102485128 May 15 04:48 EVNT.50238157._000246.pool.root.1
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m         0 May 15 04:48 boinc_lockfile
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m      2559 May 15 04:49 pandaJob.out
[2026-05-15 04:53:49] -rw------- 1 m m    993483 May 15 04:49 agis_schedconf.cvmfs.json
[2026-05-15 04:53:49] -rw------- 1 m m   1502367 May 15 04:49 agis_ddmendpoints.agis.ALL.json
[2026-05-15 04:53:49] -rw------- 1 m m       424 May 15 04:49 workernode_map.json
[2026-05-15 04:53:49] drwx------ 5 m m      4096 May 15 04:49 pilot3
[2026-05-15 04:53:49] -rw------- 1 m m       939 May 15 04:51 memory_monitor_summary.json
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m       482 May 15 04:51 boinc_task_state.xml
[2026-05-15 04:53:49] -rw------- 1 m m     21836 May 15 04:51 log.50250192._026685.job.log.tgz.1
[2026-05-15 04:53:49] -rw------- 1 m m      6996 May 15 04:53 heartbeat_new.json
[2026-05-15 04:53:49] -rw------- 1 m m      6958 May 15 04:53 heartbeat.json
[2026-05-15 04:53:49] -rw------- 1 m m        95 May 15 04:53 pilot_heartbeat.json
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m        23 May 15 04:53 wrapper_checkpoint.txt
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m      8192 May 15 04:53 boinc_mmap_file
[2026-05-15 04:53:49] -rw------- 1 m m      4744 May 15 04:53 pilotlog.txt
[2026-05-15 04:53:49] -rw------- 1 m m     77370 May 15 04:53 log.50250192._026685.job.log.1
[2026-05-15 04:53:49] -rw------- 1 m m       188 May 15 04:53 output.list
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m       410 May 15 04:53 runtime_log
[2026-05-15 04:53:49] -rw------- 1 m m    112640 May 15 04:53 result.tar.gz
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m      8198 May 15 04:53 runtime_log.err
[2026-05-15 04:53:49] -rw------- 1 m m       623 May 15 04:53 2eee1ff31489.diag
[2026-05-15 04:53:49] -rw-rw-r-- 1 m m     21465 May 15 04:53 stderr.txt
[2026-05-15 04:53:49] No HITS result produced
[2026-05-15 04:53:49]  *** Contents of shared directory: ***
[2026-05-15 04:53:49] total 100900
[2026-05-15 04:53:49] -rw-r--r-- 2 m m     15667 May 15 04:48 start_atlas.sh
[2026-05-15 04:53:49] -rw-r--r-- 2 m m    697448 May 15 04:48 input.tar.gz
[2026-05-15 04:53:49] -rw-r--r-- 2 m m 102485128 May 15 04:48 ATLAS.root_0
[2026-05-15 04:53:49] -rw------- 1 m m    112640 May 15 04:53 result.tar.gz
04:53:51 (4872): run_atlas exited; CPU time 24.199166
04:53:51 (4872): called boinc_finish(0)

</stderr_txt>
]]>

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