Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:27 (1996981): wrapper (7.7.26015): starting
00:02:27 (1996981): wrapper: running run_atlas (--nthreads 8)
[2026-05-15 00:02:27] Arguments: --nthreads 8
[2026-05-15 00:02:27] Threads: 8
[2026-05-15 00:02:27] Checking for CVMFS
[2026-05-15 00:02:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 00:02:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 00:02:28] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 00:02:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 00:02:30] 2.13.3.0 9273 20936 216764 159527 3 57 24843735 39288832 9917 16776704 0 14680422 99.595 13079356 33305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-15 00:02:30] CVMFS is ok
[2026-05-15 00:02:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-15 00:02:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-15 00:02:30] Further information can be found at the LHC@home message board.
[2026-05-15 00:02:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 00:02:30] Checking for apptainer binary...
[2026-05-15 00:02:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 00:02:30] Running /usr/bin/apptainer --version
[2026-05-15 00:02:31] apptainer version 1.4.5-3.el9
[2026-05-15 00:02:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 00:02:33] c-211-19.aglt2.org
[2026-05-15 00:02:33] apptainer works
[2026-05-15 00:02:33] Set ATHENA_PROC_NUMBER=8
[2026-05-15 00:02:33] Set ATHENA_CORE_NUMBER=8
[2026-05-15 00:02:33] Starting ATLAS job with PandaID=7139109964
[2026-05-15 00:02:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 00:12:01]  *** The last 200 lines of the pilot log: ***
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | WARNING  | wrong length of table data, x=[1778818014.0, 1778818075.0], y=[2470.0, 455257.0] (must be same and length>=4)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | INFO     | could have reported an average CPU frequency of 2900 MHz (4 samples)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . Timing measurements:
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . get job = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . initial setup = 45 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . payload setup = 66 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . stage-in = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . payload execution = 154 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . stage-out = 2 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . log creation = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:12:01] 2026-05-15 04:10:58,852 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7139109964/pilotlog.txt
[2026-05-15 00:12:01] 2026-05-15 04:10:59,004 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 00:12:01] - Log from pilotlog.txt -
[2026-05-15 00:12:01] 2026-05-15 04:10:58,738 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 00:12:01] 2026-05-15 04:10:58,795 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7139109964/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,796 | INFO     | extracted standard info from prmon json
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | WARNING  | wrong length of table data, x=[1778818014.0, 1778818075.0], y=[2470.0, 455257.0] (must be same and length>=4)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | INFO     | could have reported an average CPU frequency of 2900 MHz (4 samples)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . Timing measurements:
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . get job = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . initial setup = 45 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . payload setup = 66 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . stage-in = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . payload execution = 154 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . stage-out = 2 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . log creation = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:12:01] 2026-05-15 04:10:58,852 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7139109964/pilotlog.txt
[2026-05-15 00:12:01] 2026-05-15 04:10:59,004 | WARNING  | 
[2026-05-15 00:12:01] [begin log extracts]
[2026-05-15 00:12:01] - Log from pilotlog.txt -
[2026-05-15 00:12:01] 2026-05-15 04:10:58,738 | INFO     | payload/TRF did not report the number of read events
[2026-05-15 00:12:01] 2026-05-15 04:10:58,795 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7139109964/memory_monitor_summary.json (trf name=prmon)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,796 | INFO     | extracted standard info from prmon json
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 00:12:01] 2026-05-15 04:10:58,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | WARNING  | wrong length of table data, x=[1778818014.0, 1778818075.0], y=[2470.0, 455257.0] (must be same and length>=4)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,849 | INFO     | could have reported an average CPU frequency of 2900 MHz (4 samples)
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . Timing measurements:
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . get job = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . initial setup = 45 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . payload setup = 66 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,850 | INFO     | . stage-in = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . payload execution = 154 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . stage-out = 2 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | . log creation = 0 s
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | ..............................
[2026-05-15 00:12:01] 2026-05-15 04:10:58,851 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 00:12:01] 2026-05-15 04:10:58,852 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/2/PanDA_Pilot-7139109964/pilotlog.txt
[2026-05-15 00:12:01] [end log extracts]
[2026-05-15 00:12:01] 2026-05-15 04:10:59,004 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 00:12:01] 2026-05-15 04:10:59,005 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 00:12:01] 2026-05-15 04:10:59,073 | INFO     | monitor loop #88: job 0:7139109964 is in state 'failed'
[2026-05-15 00:12:01] 2026-05-15 04:10:59,073 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-05-15 00:12:01] 2026-05-15 04:11:00,069 | INFO     | 
[2026-05-15 00:12:01] 2026-05-15 04:11:00,069 | INFO     | job summary report
[2026-05-15 00:12:01] 2026-05-15 04:11:00,069 | INFO     | --------------------------------------------------
[2026-05-15 00:12:01] 2026-05-15 04:11:00,069 | INFO     | PanDA job id: 7139109964
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | task id: 50250192
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 04:08:40,986 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | pilot state: failed 
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | transexitcode: 65
[2026-05-15 00:12:01] 2026-05-15 04:11:00,070 | INFO     | exeerrorcode: 65
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | exitcode: 65
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | cpuconsumptiontime: 33 s
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | nevents: 0
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | neventsw: 0
[2026-05-15 00:12:01] 2026-05-15 04:11:00,071 | INFO     | pid: 2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | pgrp: 2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | corecount: 8
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | event service: False
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | sizes: {0: 2265644, 1: 2265728, 2: 2265728, 3: 2267557, 14: 2267557, 226: 2291152, 229: 2295447, 233: 2295503, 352: 2295697}
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | --------------------------------------------------
[2026-05-15 00:12:01] 2026-05-15 04:11:00,072 | INFO     | 
[2026-05-15 00:12:01] 2026-05-15 04:11:00,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-15 00:12:01] 2026-05-15 04:11:00,142 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,145 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 00:12:01] 2026-05-15 04:11:00,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 00:12:01] 2026-05-15 04:11:00,146 | INFO     | job 7139109964 has completed (purged errors)
[2026-05-15 00:12:01] 2026-05-15 04:11:00,146 | INFO     | overall cleanup function is called
[2026-05-15 00:12:01] 2026-05-15 04:11:01,159 | INFO     | --- collectZombieJob: --- 10, [2009692]
[2026-05-15 00:12:01] 2026-05-15 04:11:01,160 | INFO     | zombie collector waiting for pid 2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:01,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 00:12:01] 2026-05-15 04:11:01,160 | INFO     | collected zombie processes
[2026-05-15 00:12:01] 2026-05-15 04:11:01,160 | INFO     | will attempt to kill all subprocesses of pid=2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:02,607 | INFO     | process IDs to be killed: [2009692] (in reverse order)
[2026-05-15 00:12:01] 2026-05-15 04:11:02,829 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 00:12:01] 2026-05-15 04:11:02,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 00:12:01] 2026-05-15 04:11:02,859 | INFO     | did not find any defunct processes belonging to 2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:02,898 | INFO     | did not find any defunct processes belonging to 2009692
[2026-05-15 00:12:01] 2026-05-15 04:11:02,903 | INFO     | Ready for new job
[2026-05-15 00:12:01] 2026-05-15 04:11:02,906 | INFO     | ***************************************
[2026-05-15 00:12:01] 2026-05-15 04:11:02,906 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 00:12:01] 2026-05-15 04:11:02,906 | INFO     | ***************************************
[2026-05-15 00:12:01] 2026-05-15 04:11:02,906 | INFO     | 
[2026-05-15 00:12:01] 2026-05-15 04:11:02,908 | INFO     | architecture information:
[2026-05-15 00:12:01] 2026-05-15 04:11:02,920 | INFO     | executing command: cat /etc/os-release
[2026-05-15 00:12:01] 2026-05-15 04:11:02,991 | INFO     | cat /etc/os-release:
[2026-05-15 00:12:01] NAME="CentOS Linux"
[2026-05-15 00:12:01] VERSION="7 (Core)"
[2026-05-15 00:12:01] ID="centos"
[2026-05-15 00:12:01] ID_LIKE="rhel fedora"
[2026-05-15 00:12:01] VERSION_ID="7"
[2026-05-15 00:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 00:12:01] ANSI_COLOR="0;31"
[2026-05-15 00:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 00:12:01] HOME_URL="https://www.centos.org/"
[2026-05-15 00:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 00:12:01] 
[2026-05-15 00:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 00:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 00:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 00:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 00:12:01] 
[2026-05-15 00:12:01] 2026-05-15 04:11:02,991 | INFO     | ***************************************
[2026-05-15 00:12:01] 2026-05-15 04:11:03,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-15 00:12:01] 2026-05-15 04:11:03,770 | INFO     | sufficient remaining disk space (52257882112 B)
[2026-05-15 00:12:01] 2026-05-15 04:11:03,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 00:12:01] 2026-05-15 04:11:03,771 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 00:12:01] 2026-05-15 04:11:03,771 | INFO     | update_server=False
[2026-05-15 00:12:01] 2026-05-15 04:11:03,771 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 00:12:01] 2026-05-15 04:11:04,141 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-15 00:12:01] 2026-05-15 04:11:04,141 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-15 00:12:01] 2026-05-15 04:11:04,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 00:12:01] 2026-05-15 04:11:04,141 | INFO     | will abort loop
[2026-05-15 00:12:01] 2026-05-15 04:11:04,205 | INFO     | all data control threads have been joined
[2026-05-15 00:12:01] 2026-05-15 04:11:04,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 00:12:01] 2026-05-15 04:11:04,636 | INFO     | all payload control threads have been joined
[2026-05-15 00:12:01] 2026-05-15 04:11:04,752 | INFO     | all job control threads have been joined
[2026-05-15 00:12:01] 2026-05-15 04:11:04,777 | INFO     | [job] retrieve thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,014 | INFO     | [job] validate thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,020 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,025 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 00:12:01] 2026-05-15 04:11:05,157 | INFO     | [job] job monitor thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,169 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,215 | INFO     | [data] control thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,522 | INFO     | [data] copytool_in thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,531 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,642 | INFO     | [payload] control thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,758 | INFO     | [job] control thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:05,915 | INFO     | [payload] validate_post thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:06,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 00:12:01] 2026-05-15 04:11:06,106 | INFO     | [payload] failed_post thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:06,178 | INFO     | [job] queue monitor thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:06,524 | INFO     | [data] copytool_out thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:10,059 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 00:12:01] 2026-05-15 04:11:34,733 | INFO     | PID=2001624 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-15 00:12:01] 2026-05-15 04:11:34,733 | INFO     | .. there are 8 such processes running
[2026-05-15 00:12:01] 2026-05-15 04:11:34,735 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 00:12:01] 2026-05-15 04:11:34,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 00:12:01] 2026-05-15 04:11:34,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 00:12:01] 2026-05-15 04:11:52,691 | INFO     | [monitor] cgroup control has ended
[2026-05-15 00:12:01] 2026-05-15 04:11:53,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470127134528)>', '<ExcThread(monitor, started 140469757523712)>']
[2026-05-15 00:12:01] 2026-05-15 04:11:53,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 00:12:01] 2026-05-15 04:11:53,965 | INFO     | [monitor] control thread has ended
[2026-05-15 00:12:01] 2026-05-15 04:11:58,476 | INFO     | all workflow threads have been joined
[2026-05-15 00:12:01] 2026-05-15 04:11:58,476 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 00:12:01] 2026-05-15 04:11:58,477 | INFO     | traces error code: 0
[2026-05-15 00:12:01] 2026-05-15 04:11:58,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 00:12:01] 2026-05-15 04:11:58,743 [wrapper] ==== pilot stdout END ====
[2026-05-15 00:12:01] 2026-05-15 04:11:58,782 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 00:12:01] 2026-05-15 04:11:58,841 [wrapper] pilotpid: 2001624
[2026-05-15 00:12:01] 2026-05-15 04:11:58,902 [wrapper] Pilot exit status: 0
[2026-05-15 00:12:01] 2026-05-15 04:11:59,165 [wrapper] pandaids: 7139109964
[2026-05-15 00:12:01] 2026-05-15 04:11:59,815 [wrapper] cleanup supervisor_pilot 2001630 2001625
[2026-05-15 00:12:01] 2026-05-15 04:11:59,877 [wrapper] Test setup, not cleaning
[2026-05-15 00:12:01] 2026-05-15 04:11:59,956 [wrapper] apfmon messages muted
[2026-05-15 00:12:01] 2026-05-15 04:12:00,025 [wrapper] ==== wrapper stdout END ====
[2026-05-15 00:12:01] 2026-05-15 04:12:00,062 [wrapper] ==== wrapper stderr END ====
[2026-05-15 00:12:01]  *** Error codes and diagnostics ***
[2026-05-15 00:12:01]     "exeErrorCode": 65,
[2026-05-15 00:12:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 00:12:01]     "pilotErrorCode": 1305,
[2026-05-15 00:12:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 00:12:01]  *** Listing of results directory ***
[2026-05-15 00:12:01] total 107304
[2026-05-15 00:12:01] -rwx------. 1 boincer umatlas     36281 May 14 16:21 runpilot2-wrapper.sh
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas      5631 May 14 23:08 queuedata.json
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas    683926 May 14 23:08 pilot3.tar.gz
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas       100 May 15 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 00:12:01] -rwxr-xr-x. 1 boincer umatlas      7986 May 15 00:02 run_atlas
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas       105 May 15 00:02 job.xml
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas 105533409 May 15 00:02 EVNT.50238157._000128.pool.root.1
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas     15667 May 15 00:02 start_atlas.sh
[2026-05-15 00:12:01] drwxrwx--x. 2 boincer umatlas      4096 May 15 00:02 shared
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas    697449 May 15 00:02 input.tar.gz
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas         0 May 15 00:02 boinc_lockfile
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas      2560 May 15 00:02 pandaJob.out
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas        57 May 15 00:02 setup.sh.local
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas    993483 May 15 00:04 agis_schedconf.cvmfs.json
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas   1502367 May 15 00:04 agis_ddmendpoints.agis.ALL.json
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas       435 May 15 00:04 workernode_map.json
[2026-05-15 00:12:01] drwx------. 5 boincer umatlas      4096 May 15 00:04 pilot3
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas       994 May 15 00:08 memory_monitor_summary.json
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas     22589 May 15 00:08 log.50250192._025355.job.log.tgz.1
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas       483 May 15 00:08 boinc_task_state.xml
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas      7130 May 15 00:10 heartbeat_new.json
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas      7092 May 15 00:10 heartbeat.json
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas      6433 May 15 00:11 init_data.xml
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas        95 May 15 00:11 pilot_heartbeat.json
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas      8192 May 15 00:11 boinc_mmap_file
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas        23 May 15 00:11 wrapper_checkpoint.txt
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas      5008 May 15 00:11 pilotlog.txt
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas     90262 May 15 00:12 log.50250192._025355.job.log.1
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas       188 May 15 00:12 output.list
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas       410 May 15 00:12 runtime_log
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas    133120 May 15 00:12 result.tar.gz
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas      8811 May 15 00:12 runtime_log.err
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas       641 May 15 00:12 2eb2602f23b6.diag
[2026-05-15 00:12:01] -rw-r--r--. 1 boincer umatlas     21986 May 15 00:12 stderr.txt
[2026-05-15 00:12:01] No HITS result produced
[2026-05-15 00:12:01]  *** Contents of shared directory: ***
[2026-05-15 00:12:01] total 103892
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas 105533409 May 15 00:02 ATLAS.root_0
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas     15667 May 15 00:02 start_atlas.sh
[2026-05-15 00:12:01] -rw-r--r--. 2 boincer umatlas    697449 May 15 00:02 input.tar.gz
[2026-05-15 00:12:01] -rw-------. 1 boincer umatlas    133120 May 15 00:12 result.tar.gz
00:12:02 (1996981): run_atlas exited; CPU time 45.599859
00:12:02 (1996981): called boinc_finish(0)

</stderr_txt>
]]>

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