Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:52:19 (15816): wrapper (7.7.26015): starting
04:52:19 (15816): wrapper: running run_atlas (--nthreads 8)
[2026-05-15 04:52:19] Arguments: --nthreads 8
[2026-05-15 04:52:19] Threads: 8
[2026-05-15 04:52:19] Checking for CVMFS
[2026-05-15 04:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 04:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 04:52:19] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 04:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 04:52:19] 2.11.2.0 32005 42347 101200 159523 2 197 14198431 25165825 96 130560 0 26321014 99.965 8563761 9440 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-15 04:52:19] CVMFS is ok
[2026-05-15 04:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 04:52:19] Checking for apptainer binary...
[2026-05-15 04:52:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 04:52:19] Running /usr/bin/apptainer --version
[2026-05-15 04:52:19] apptainer version 1.3.2-1.el7
[2026-05-15 04:52:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 04:52:21] cg-vwn378.simple-grid.lan
[2026-05-15 04:52:21] apptainer works
[2026-05-15 04:52:21] Set ATHENA_PROC_NUMBER=8
[2026-05-15 04:52:21] Set ATHENA_CORE_NUMBER=8
[2026-05-15 04:52:21] Starting ATLAS job with PandaID=7139191207
[2026-05-15 04:52:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 04:56:50]  *** The last 200 lines of the pilot log: ***
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | found no stored workdir sizes
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | wrong length of table data, x=[1778813593.0], y=[960.0] (must be same and length>=4)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . Timing measurements:
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . get job = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . initial setup = 6 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload setup = 13 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-in = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload execution = 37 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-out = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . log creation = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:56:50] 2026-05-15 02:55:48,399 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139191207/pilotlog.txt
[2026-05-15 04:56:50] 2026-05-15 02:55:48,759 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 04:56:50] - Log from pilotlog.txt -
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | INFO     | extracted standard info from prmon json
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | found no stored workdir sizes
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | wrong length of table data, x=[1778813593.0], y=[960.0] (must be same and length>=4)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . Timing measurements:
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . get job = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . initial setup = 6 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload setup = 13 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-in = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload execution = 37 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-out = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . log creation = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:56:50] 2026-05-15 02:55:48,399 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139191207/pilotlog.txt
[2026-05-15 04:56:50] 2026-05-15 02:55:48,759 | WARNING  | 
[2026-05-15 04:56:50] [begin log extracts]
[2026-05-15 04:56:50] - Log from pilotlog.txt -
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | INFO     | extracted standard info from prmon json
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 04:56:50] 2026-05-15 02:55:48,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | found no stored workdir sizes
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | WARNING  | wrong length of table data, x=[1778813593.0], y=[960.0] (must be same and length>=4)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,397 | INFO     | could have reported an average CPU frequency of 1999 MHz (4 samples)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . Timing measurements:
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . get job = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . initial setup = 6 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload setup = 13 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-in = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . payload execution = 37 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . stage-out = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | . log creation = 0 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | ..............................
[2026-05-15 04:56:50] 2026-05-15 02:55:48,398 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 04:56:50] 2026-05-15 02:55:48,399 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/12/PanDA_Pilot-7139191207/pilotlog.txt
[2026-05-15 04:56:50] [end log extracts]
[2026-05-15 04:56:50] 2026-05-15 02:55:48,760 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,760 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 04:56:50] 2026-05-15 02:55:48,917 | INFO     | 
[2026-05-15 04:56:50] 2026-05-15 02:55:48,917 | INFO     | job summary report
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | --------------------------------------------------
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | PanDA job id: 7139191207
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | task id: 50250192
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 02:53:39,442 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | pilot state: failed 
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | transexitcode: 65
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | exeerrorcode: 65
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | exitcode: 65
[2026-05-15 04:56:50] 2026-05-15 02:55:48,918 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | cpuconsumptiontime: 27 s
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | nevents: 0
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | neventsw: 0
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | pid: 23992
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | pgrp: 23992
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | corecount: 8
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | event service: False
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | sizes: {0: 2265700, 1: 2267529, 12: 2267529, 54: 2290889, 55: 2295185, 58: 2295213, 176: 2295507}
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | --------------------------------------------------
[2026-05-15 04:56:50] 2026-05-15 02:55:48,919 | INFO     | 
[2026-05-15 04:56:50] 2026-05-15 02:55:48,920 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | job 7139191207 has completed (purged errors)
[2026-05-15 04:56:50] 2026-05-15 02:55:49,595 | INFO     | overall cleanup function is called
[2026-05-15 04:56:50] 2026-05-15 02:55:50,602 | INFO     | --- collectZombieJob: --- 10, [23992]
[2026-05-15 04:56:50] 2026-05-15 02:55:50,602 | INFO     | zombie collector waiting for pid 23992
[2026-05-15 04:56:50] 2026-05-15 02:55:50,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 04:56:50] 2026-05-15 02:55:50,603 | INFO     | collected zombie processes
[2026-05-15 04:56:50] 2026-05-15 02:55:50,603 | INFO     | will attempt to kill all subprocesses of pid=23992
[2026-05-15 04:56:50] 2026-05-15 02:55:50,674 | INFO     | process IDs to be killed: [23992] (in reverse order)
[2026-05-15 04:56:50] 2026-05-15 02:55:51,696 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 04:56:50] 2026-05-15 02:55:51,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 04:56:50] 2026-05-15 02:55:51,698 | INFO     | did not find any defunct processes belonging to 23992
[2026-05-15 04:56:50] 2026-05-15 02:55:51,700 | INFO     | did not find any defunct processes belonging to 23992
[2026-05-15 04:56:50] 2026-05-15 02:55:51,700 | INFO     | Ready for new job
[2026-05-15 04:56:50] 2026-05-15 02:55:51,703 | INFO     | ***************************************
[2026-05-15 04:56:50] 2026-05-15 02:55:51,703 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 04:56:50] 2026-05-15 02:55:51,704 | INFO     | ***************************************
[2026-05-15 04:56:50] 2026-05-15 02:55:51,704 | INFO     | 
[2026-05-15 04:56:50] 2026-05-15 02:55:51,704 | INFO     | pilot is running in a VM
[2026-05-15 04:56:50] 2026-05-15 02:55:51,704 | INFO     | architecture information:
[2026-05-15 04:56:50] 2026-05-15 02:55:51,721 | INFO     | executing command: cat /etc/os-release
[2026-05-15 04:56:50] 2026-05-15 02:55:52,032 | INFO     | cat /etc/os-release:
[2026-05-15 04:56:50] NAME="CentOS Linux"
[2026-05-15 04:56:50] VERSION="7 (Core)"
[2026-05-15 04:56:50] ID="centos"
[2026-05-15 04:56:50] ID_LIKE="rhel fedora"
[2026-05-15 04:56:50] VERSION_ID="7"
[2026-05-15 04:56:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 04:56:50] ANSI_COLOR="0;31"
[2026-05-15 04:56:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 04:56:50] HOME_URL="https://www.centos.org/"
[2026-05-15 04:56:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 04:56:50] 
[2026-05-15 04:56:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 04:56:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 04:56:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 04:56:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 04:56:50] 
[2026-05-15 04:56:50] 2026-05-15 02:55:52,032 | INFO     | ***************************************
[2026-05-15 04:56:50] 2026-05-15 02:55:52,535 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-05-15 04:56:50] 2026-05-15 02:55:52,677 | INFO     | sufficient remaining disk space (497600692224 B)
[2026-05-15 04:56:50] 2026-05-15 02:55:52,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 04:56:50] 2026-05-15 02:55:52,677 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 04:56:50] 2026-05-15 02:55:52,677 | INFO     | update_server=False
[2026-05-15 04:56:50] 2026-05-15 02:55:52,678 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 04:56:50] 2026-05-15 02:55:52,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 04:56:50] 2026-05-15 02:55:52,686 | INFO     | aborting loop
[2026-05-15 04:56:50] 2026-05-15 02:55:52,869 | INFO     | all job control threads have been joined
[2026-05-15 04:56:50] 2026-05-15 02:55:52,909 | INFO     | all payload control threads have been joined
[2026-05-15 04:56:50] 2026-05-15 02:55:53,683 | INFO     | [job] retrieve thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,691 | INFO     | [job] job monitor thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,719 | INFO     | all data control threads have been joined
[2026-05-15 04:56:50] 2026-05-15 02:55:53,727 | INFO     | [job] validate thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,734 | INFO     | [payload] failed_post thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 04:56:50] 2026-05-15 02:55:53,875 | INFO     | [job] control thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,915 | INFO     | [payload] control thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:53,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 04:56:50] 2026-05-15 02:55:54,054 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 04:56:50] 2026-05-15 02:55:54,301 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,439 | INFO     | [payload] validate_post thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,649 | INFO     | [data] copytool_in thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,725 | INFO     | [data] control thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,732 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,885 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:54,941 | INFO     | [job] queue monitor thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:55,758 | INFO     | [data] copytool_out thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:55:58,251 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 04:56:50] 2026-05-15 02:56:20,891 | INFO     | PID=19563 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-15 04:56:50] 2026-05-15 02:56:20,892 | INFO     | .. there are 2 such processes running
[2026-05-15 04:56:50] 2026-05-15 02:56:20,892 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 04:56:50] 2026-05-15 02:56:20,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 04:56:50] 2026-05-15 02:56:20,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 04:56:50] 2026-05-15 02:56:41,205 | INFO     | [monitor] cgroup control has ended
[2026-05-15 04:56:50] 2026-05-15 02:56:42,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326736815936)>', '<ExcThread(monitor, started 140326295557888)>']
[2026-05-15 04:56:50] 2026-05-15 02:56:43,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 04:56:50] 2026-05-15 02:56:43,021 | INFO     | [monitor] control thread has ended
[2026-05-15 04:56:50] 2026-05-15 02:56:47,275 | INFO     | all workflow threads have been joined
[2026-05-15 04:56:50] 2026-05-15 02:56:47,276 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 04:56:50] 2026-05-15 02:56:47,276 | INFO     | traces error code: 0
[2026-05-15 04:56:50] 2026-05-15 02:56:47,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 04:56:50] 2026-05-15 02:56:47,541 [wrapper] ==== pilot stdout END ====
[2026-05-15 04:56:50] 2026-05-15 02:56:47,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 04:56:50] 2026-05-15 02:56:47,702 [wrapper] pilotpid: 19563
[2026-05-15 04:56:50] 2026-05-15 02:56:47,779 [wrapper] Pilot exit status: 0
[2026-05-15 04:56:50] 2026-05-15 02:56:48,045 [wrapper] pandaids: 7139191207
[2026-05-15 04:56:50] 2026-05-15 02:56:48,869 [wrapper] cleanup supervisor_pilot 19569 19564
[2026-05-15 04:56:50] 2026-05-15 02:56:48,964 [wrapper] Test setup, not cleaning
[2026-05-15 04:56:50] 2026-05-15 02:56:49,076 [wrapper] apfmon messages muted
[2026-05-15 04:56:50] 2026-05-15 02:56:49,161 [wrapper] ==== wrapper stdout END ====
[2026-05-15 04:56:50] 2026-05-15 02:56:49,257 [wrapper] ==== wrapper stderr END ====
[2026-05-15 04:56:50]  *** Error codes and diagnostics ***
[2026-05-15 04:56:50]     "exeErrorCode": 65,
[2026-05-15 04:56:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 04:56:50]     "pilotErrorCode": 1305,
[2026-05-15 04:56:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 04:56:50]  *** Listing of results directory ***
[2026-05-15 04:56:50] total 105096
[2026-05-15 04:56:50] -rwx------. 1 boinc boinc     36281 May 14 22:18 runpilot2-wrapper.sh
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc      5631 May 15 04:08 queuedata.json
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc    683926 May 15 04:08 pilot3.tar.gz
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc       100 May 15 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 04:56:50] -rwxr-xr-x. 1 boinc boinc      7986 May 15 04:52 run_atlas
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc       105 May 15 04:52 job.xml
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc 103322608 May 15 04:52 EVNT.50238157._000179.pool.root.1
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc      6307 May 15 04:52 init_data.xml
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc     15667 May 15 04:52 start_atlas.sh
[2026-05-15 04:56:50] drwxrwx--x. 2 boinc boinc        68 May 15 04:52 shared
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc    697447 May 15 04:52 input.tar.gz
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc         0 May 15 04:52 boinc_lockfile
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc      2559 May 15 04:52 pandaJob.out
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc    993483 May 15 04:52 agis_schedconf.cvmfs.json
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc   1502367 May 15 04:52 agis_ddmendpoints.agis.ALL.json
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc       415 May 15 04:52 workernode_map.json
[2026-05-15 04:56:50] drwx------. 5 boinc boinc      4096 May 15 04:52 pilot3
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc       481 May 15 04:53 boinc_task_state.xml
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc       933 May 15 04:53 memory_monitor_summary.json
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc     20354 May 15 04:53 log.50250192._025824.job.log.tgz.1
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc        95 May 15 04:55 pilot_heartbeat.json
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc      6985 May 15 04:55 heartbeat_new.json
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc      6947 May 15 04:55 heartbeat.json
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc      8192 May 15 04:56 boinc_mmap_file
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc        23 May 15 04:56 wrapper_checkpoint.txt
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc      4884 May 15 04:56 pilotlog.txt
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc     75793 May 15 04:56 log.50250192._025824.job.log.1
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc       188 May 15 04:56 output.list
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc       410 May 15 04:56 runtime_log
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc    112640 May 15 04:56 result.tar.gz
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc      8301 May 15 04:56 runtime_log.err
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc       637 May 15 04:56 2e1738034cb1.diag
[2026-05-15 04:56:50] -rw-r--r--. 1 boinc boinc     21291 May 15 04:56 stderr.txt
[2026-05-15 04:56:50] No HITS result produced
[2026-05-15 04:56:50]  *** Contents of shared directory: ***
[2026-05-15 04:56:50] total 101716
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc 103322608 May 15 04:52 ATLAS.root_0
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc     15667 May 15 04:52 start_atlas.sh
[2026-05-15 04:56:50] -rw-r--r--. 2 boinc boinc    697447 May 15 04:52 input.tar.gz
[2026-05-15 04:56:50] -rw-------. 1 boinc boinc    112640 May 15 04:56 result.tar.gz
04:56:52 (15816): run_atlas exited; CPU time 27.221788
04:56:52 (15816): called boinc_finish(0)

</stderr_txt>
]]>

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