Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:31:37 (1262271): wrapper (7.7.26015): starting
23:31:37 (1262271): wrapper: running run_atlas (--nthreads 12)
[2026-05-14 23:31:38] Arguments: --nthreads 12
[2026-05-14 23:31:38] Threads: 12
[2026-05-14 23:31:38] Checking for CVMFS
[2026-05-14 23:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-14 23:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-14 23:31:38] Running cvmfs_config stat atlas.cern.ch
[2026-05-14 23:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-14 23:31:38] 2.13.3.0 12312 20983 184836 159524 2 91 23384291 32935936 17018 16776704 0 72164184 99.542 89312119 31497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-14 23:31:38] CVMFS is ok
[2026-05-14 23:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-14 23:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-14 23:31:38] Further information can be found at the LHC@home message board.
[2026-05-14 23:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-14 23:31:38] Checking for apptainer binary...
[2026-05-14 23:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-14 23:31:38] Running /usr/bin/apptainer --version
[2026-05-14 23:31:39] apptainer version 1.4.5-3.el9
[2026-05-14 23:31:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-14 23:31:39] c-5-2.aglt2.org
[2026-05-14 23:31:39] apptainer works
[2026-05-14 23:31:39] Set ATHENA_PROC_NUMBER=12
[2026-05-14 23:31:39] Set ATHENA_CORE_NUMBER=12
[2026-05-14 23:31:39] Starting ATLAS job with PandaID=7139193481
[2026-05-14 23:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-14 23:36:14]  *** The last 200 lines of the pilot log: ***
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | found no stored workdir sizes
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | WARNING  | wrong length of table data, x=[1778815954.0], y=[1955.0] (must be same and length>=4)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . Timing measurements:
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . get job = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . initial setup = 13 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload setup = 15 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-in = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload execution = 45 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-out = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . log creation = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:36:14] 2026-05-15 03:35:14,782 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193481/pilotlog.txt
[2026-05-14 23:36:14] 2026-05-15 03:35:14,808 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-14 23:36:14] - Log from pilotlog.txt -
[2026-05-14 23:36:14] 2026-05-15 03:35:14,778 | INFO     | extracted standard info from prmon json
[2026-05-14 23:36:14] 2026-05-15 03:35:14,778 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | found no stored workdir sizes
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | WARNING  | wrong length of table data, x=[1778815954.0], y=[1955.0] (must be same and length>=4)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . Timing measurements:
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . get job = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . initial setup = 13 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload setup = 15 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-in = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload execution = 45 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-out = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . log creation = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:36:14] 2026-05-15 03:35:14,782 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193481/pilotlog.txt
[2026-05-14 23:36:14] 2026-05-15 03:35:14,808 | WARNING  | 
[2026-05-14 23:36:14] [begin log extracts]
[2026-05-14 23:36:14] - Log from pilotlog.txt -
[2026-05-14 23:36:14] 2026-05-15 03:35:14,778 | INFO     | extracted standard info from prmon json
[2026-05-14 23:36:14] 2026-05-15 03:35:14,778 | INFO     | extracted standard memory fields from prmon json
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | WARNING  | found no stored workdir sizes
[2026-05-14 23:36:14] 2026-05-15 03:35:14,779 | INFO     | will not add max space = 0 B to job metrics
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | WARNING  | wrong length of table data, x=[1778815954.0], y=[1955.0] (must be same and length>=4)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | could have reported an average CPU frequency of 2599 MHz (4 samples)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,780 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . Timing measurements:
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . get job = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . initial setup = 13 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload setup = 15 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-in = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . payload execution = 45 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . stage-out = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | . log creation = 0 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | ..............................
[2026-05-14 23:36:14] 2026-05-15 03:35:14,781 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-14 23:36:14] 2026-05-15 03:35:14,782 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-7139193481/pilotlog.txt
[2026-05-14 23:36:14] [end log extracts]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,809 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,810 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-14 23:36:14] 2026-05-15 03:35:14,921 | INFO     | 
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | job summary report
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | --------------------------------------------------
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | PanDA job id: 7139193481
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | task id: 50250192
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 03:33:05,260 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | pilot state: failed 
[2026-05-14 23:36:14] 2026-05-15 03:35:14,922 | INFO     | transexitcode: 65
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | exeerrorcode: 65
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | exitcode: 65
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | cpuconsumptiontime: 26 s
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | nevents: 0
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | neventsw: 0
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | pid: 1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | pgrp: 1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | corecount: 12
[2026-05-14 23:36:14] 2026-05-15 03:35:14,923 | INFO     | event service: False
[2026-05-14 23:36:14] 2026-05-15 03:35:14,924 | INFO     | sizes: {0: 2265641, 1: 2267526, 2: 2267526, 64: 2290975, 65: 2295270, 68: 2295298, 185: 2295592}
[2026-05-14 23:36:14] 2026-05-15 03:35:14,924 | INFO     | --------------------------------------------------
[2026-05-14 23:36:14] 2026-05-15 03:35:14,924 | INFO     | 
[2026-05-14 23:36:14] 2026-05-15 03:35:14,924 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-14 23:36:14] 2026-05-15 03:35:14,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-14 23:36:14] 2026-05-15 03:35:14,947 | INFO     | job 7139193481 has completed (purged errors)
[2026-05-14 23:36:14] 2026-05-15 03:35:14,947 | INFO     | overall cleanup function is called
[2026-05-14 23:36:14] 2026-05-15 03:35:15,954 | INFO     | --- collectZombieJob: --- 10, [1271104]
[2026-05-14 23:36:14] 2026-05-15 03:35:15,954 | INFO     | zombie collector waiting for pid 1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:15,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-14 23:36:14] 2026-05-15 03:35:15,955 | INFO     | collected zombie processes
[2026-05-14 23:36:14] 2026-05-15 03:35:15,955 | INFO     | will attempt to kill all subprocesses of pid=1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:16,204 | INFO     | process IDs to be killed: [1271104] (in reverse order)
[2026-05-14 23:36:14] 2026-05-15 03:35:16,319 | WARNING  | found no corresponding commands to process id(s)
[2026-05-14 23:36:14] 2026-05-15 03:35:16,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-14 23:36:14] 2026-05-15 03:35:16,340 | INFO     | did not find any defunct processes belonging to 1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:16,380 | INFO     | did not find any defunct processes belonging to 1271104
[2026-05-14 23:36:14] 2026-05-15 03:35:16,381 | INFO     | Ready for new job
[2026-05-14 23:36:14] 2026-05-15 03:35:16,398 | INFO     | ***************************************
[2026-05-14 23:36:14] 2026-05-15 03:35:16,398 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-14 23:36:14] 2026-05-15 03:35:16,398 | INFO     | ***************************************
[2026-05-14 23:36:14] 2026-05-15 03:35:16,398 | INFO     | 
[2026-05-14 23:36:14] 2026-05-15 03:35:16,413 | INFO     | architecture information:
[2026-05-14 23:36:14] 2026-05-15 03:35:16,418 | INFO     | executing command: cat /etc/os-release
[2026-05-14 23:36:14] 2026-05-15 03:35:16,465 | INFO     | cat /etc/os-release:
[2026-05-14 23:36:14] NAME="CentOS Linux"
[2026-05-14 23:36:14] VERSION="7 (Core)"
[2026-05-14 23:36:14] ID="centos"
[2026-05-14 23:36:14] ID_LIKE="rhel fedora"
[2026-05-14 23:36:14] VERSION_ID="7"
[2026-05-14 23:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-14 23:36:14] ANSI_COLOR="0;31"
[2026-05-14 23:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-14 23:36:14] HOME_URL="https://www.centos.org/"
[2026-05-14 23:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-14 23:36:14] 
[2026-05-14 23:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-14 23:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-14 23:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-14 23:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-14 23:36:14] 
[2026-05-14 23:36:14] 2026-05-15 03:35:16,465 | INFO     | ***************************************
[2026-05-14 23:36:14] 2026-05-15 03:35:16,969 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-14 23:36:14] 2026-05-15 03:35:17,136 | INFO     | sufficient remaining disk space (76481036288 B)
[2026-05-14 23:36:14] 2026-05-15 03:35:17,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-14 23:36:14] 2026-05-15 03:35:17,137 | INFO     | current server update state: UPDATING_FINAL
[2026-05-14 23:36:14] 2026-05-15 03:35:17,137 | INFO     | update_server=False
[2026-05-14 23:36:14] 2026-05-15 03:35:17,137 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-14 23:36:14] 2026-05-15 03:35:17,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-14 23:36:14] 2026-05-15 03:35:17,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:36:14] 2026-05-15 03:35:17,142 | INFO     | aborting loop
[2026-05-14 23:36:14] 2026-05-15 03:35:17,248 | INFO     | all payload control threads have been joined
[2026-05-14 23:36:14] 2026-05-15 03:35:17,686 | INFO     | all data control threads have been joined
[2026-05-14 23:36:14] 2026-05-15 03:35:17,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-14 23:36:14] 2026-05-15 03:35:18,143 | INFO     | [job] retrieve thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,148 | INFO     | [job] job monitor thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,256 | INFO     | [payload] control thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,436 | INFO     | [payload] execute_payloads thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,664 | INFO     | all job control threads have been joined
[2026-05-14 23:36:14] 2026-05-15 03:35:18,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,692 | INFO     | [data] control thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,705 | INFO     | [job] validate thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:18,802 | INFO     | [payload] failed_post thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,052 | INFO     | [job] create_data_payload thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,389 | INFO     | [payload] validate_pre thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,414 | INFO     | [payload] validate_post thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,431 | INFO     | [data] copytool_in thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,670 | INFO     | [job] control thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,845 | INFO     | [data] copytool_out thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:19,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-14 23:36:14] 2026-05-15 03:35:20,943 | INFO     | [job] queue monitor thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:21,147 | INFO     | [data] queue_monitor thread has finished
[2026-05-14 23:36:14] 2026-05-15 03:35:47,303 | INFO     | PID=1265951 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-14 23:36:14] 2026-05-15 03:35:47,303 | INFO     | .. there are 16 such processes running
[2026-05-14 23:36:14] 2026-05-15 03:35:47,303 | INFO     | found 0 job(s) in 20 queues
[2026-05-14 23:36:14] 2026-05-15 03:35:47,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-14 23:36:14] 2026-05-15 03:35:47,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-14 23:36:14] 2026-05-15 03:36:07,606 | INFO     | [monitor] cgroup control has ended
[2026-05-14 23:36:14] 2026-05-15 03:36:08,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255819872064)>', '<ExcThread(monitor, started 140255478920960)>']
[2026-05-14 23:36:14] 2026-05-15 03:36:09,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-14 23:36:14] 2026-05-15 03:36:09,450 | INFO     | [monitor] control thread has ended
[2026-05-14 23:36:14] 2026-05-15 03:36:13,677 | INFO     | all workflow threads have been joined
[2026-05-14 23:36:14] 2026-05-15 03:36:13,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-14 23:36:14] 2026-05-15 03:36:13,678 | INFO     | traces error code: 0
[2026-05-14 23:36:14] 2026-05-15 03:36:13,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-14 23:36:14] 2026-05-15 03:36:13,967 [wrapper] ==== pilot stdout END ====
[2026-05-14 23:36:14] 2026-05-15 03:36:13,972 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-14 23:36:14] 2026-05-15 03:36:13,974 [wrapper] pilotpid: 1265951
[2026-05-14 23:36:14] 2026-05-15 03:36:13,977 [wrapper] Pilot exit status: 0
[2026-05-14 23:36:14] 2026-05-15 03:36:14,034 [wrapper] pandaids: 7139193481
[2026-05-14 23:36:14] 2026-05-15 03:36:14,159 [wrapper] cleanup supervisor_pilot 1265957 1265952
[2026-05-14 23:36:14] 2026-05-15 03:36:14,164 [wrapper] Test setup, not cleaning
[2026-05-14 23:36:14] 2026-05-15 03:36:14,167 [wrapper] apfmon messages muted
[2026-05-14 23:36:14] 2026-05-15 03:36:14,170 [wrapper] ==== wrapper stdout END ====
[2026-05-14 23:36:14] 2026-05-15 03:36:14,173 [wrapper] ==== wrapper stderr END ====
[2026-05-14 23:36:14]  *** Error codes and diagnostics ***
[2026-05-14 23:36:14]     "exeErrorCode": 65,
[2026-05-14 23:36:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:36:14]     "pilotErrorCode": 1305,
[2026-05-14 23:36:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-14 23:36:14]  *** Listing of results directory ***
[2026-05-14 23:36:14] total 105888
[2026-05-14 23:36:14] -rwx------. 1 boincer umatlas     36281 May 14 16:18 runpilot2-wrapper.sh
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas      5631 May 14 22:08 queuedata.json
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas    683926 May 14 22:08 pilot3.tar.gz
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas       100 May 14 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-14 23:36:14] -rwxr-xr-x. 1 boincer umatlas      7986 May 14 23:31 run_atlas
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas       105 May 14 23:31 job.xml
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas 104104896 May 14 23:31 EVNT.50238157._000211.pool.root.1
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas      6565 May 14 23:31 init_data.xml
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas     15667 May 14 23:31 start_atlas.sh
[2026-05-14 23:36:14] drwxrwx--x. 2 boincer umatlas      4096 May 14 23:31 shared
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas    697443 May 14 23:31 input.tar.gz
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas         0 May 14 23:31 boinc_lockfile
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas      2558 May 14 23:31 pandaJob.out
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas        57 May 14 23:31 setup.sh.local
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas    993483 May 14 23:31 agis_schedconf.cvmfs.json
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas   1502367 May 14 23:31 agis_ddmendpoints.agis.ALL.json
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas       439 May 14 23:32 workernode_map.json
[2026-05-14 23:36:14] drwx------. 5 boincer umatlas      4096 May 14 23:32 pilot3
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas       481 May 14 23:33 boinc_task_state.xml
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas       982 May 14 23:33 memory_monitor_summary.json
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas     21333 May 14 23:33 log.50250192._026401.job.log.tgz.1
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas        95 May 14 23:34 pilot_heartbeat.json
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas      7085 May 14 23:35 heartbeat_new.json
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas      7047 May 14 23:35 heartbeat.json
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas      8192 May 14 23:35 boinc_mmap_file
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas        23 May 14 23:35 wrapper_checkpoint.txt
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas      4823 May 14 23:36 pilotlog.txt
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas     81850 May 14 23:36 log.50250192._026401.job.log.1
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas       188 May 14 23:36 output.list
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas       410 May 14 23:36 runtime_log
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas    122880 May 14 23:36 result.tar.gz
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas      8798 May 14 23:36 runtime_log.err
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas       638 May 14 23:36 2e2503c03e9b.diag
[2026-05-14 23:36:14] -rw-r--r--. 1 boincer umatlas     21637 May 14 23:36 stderr.txt
[2026-05-14 23:36:14] No HITS result produced
[2026-05-14 23:36:14]  *** Contents of shared directory: ***
[2026-05-14 23:36:14] total 102488
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas 104104896 May 14 23:31 ATLAS.root_0
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas     15667 May 14 23:31 start_atlas.sh
[2026-05-14 23:36:14] -rw-r--r--. 2 boincer umatlas    697443 May 14 23:31 input.tar.gz
[2026-05-14 23:36:14] -rw-------. 1 boincer umatlas    122880 May 14 23:36 result.tar.gz
23:36:15 (1262271): run_atlas exited; CPU time 31.770823
23:36:15 (1262271): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN