Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:38:21 (29788): wrapper (7.7.26015): starting
09:38:21 (29788): wrapper: running run_atlas (--nthreads 8)
[2026-05-15 09:38:21] Arguments: --nthreads 8
[2026-05-15 09:38:21] Threads: 8
[2026-05-15 09:38:21] Checking for CVMFS
[2026-05-15 09:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-15 09:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-15 09:38:22] Running cvmfs_config stat atlas.cern.ch
[2026-05-15 09:38:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-15 09:38:22] 2.11.2.0 10320 42649 101396 159532 2 190 21581491 25165824 358 130560 0 77429323 99.975 11511028 7213 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-15 09:38:22] CVMFS is ok
[2026-05-15 09:38:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-15 09:38:22] Checking for apptainer binary...
[2026-05-15 09:38:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-15 09:38:22] Running /usr/bin/apptainer --version
[2026-05-15 09:38:22] apptainer version 1.3.2-1.el7
[2026-05-15 09:38:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-15 09:38:23] cg-vwn492.simple-grid.lan
[2026-05-15 09:38:23] apptainer works
[2026-05-15 09:38:23] Set ATHENA_PROC_NUMBER=8
[2026-05-15 09:38:23] Set ATHENA_CORE_NUMBER=8
[2026-05-15 09:38:23] Starting ATLAS job with PandaID=7139191209
[2026-05-15 09:38:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-15 09:42:47]  *** The last 200 lines of the pilot log: ***
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | WARNING  | found no stored workdir sizes
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | WARNING  | wrong length of table data, x=[1778830753.0], y=[14010.0] (must be same and length>=4)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . Timing measurements:
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . get job = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . initial setup = 6 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload setup = 13 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-in = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload execution = 34 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-out = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . log creation = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:42:47] 2026-05-15 07:41:45,337 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/15/PanDA_Pilot-7139191209/pilotlog.txt
[2026-05-15 09:42:47] 2026-05-15 07:41:45,355 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-15 09:42:47] - Log from pilotlog.txt -
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | INFO     | extracted standard info from prmon json
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | WARNING  | found no stored workdir sizes
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | WARNING  | wrong length of table data, x=[1778830753.0], y=[14010.0] (must be same and length>=4)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . Timing measurements:
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . get job = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . initial setup = 6 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload setup = 13 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-in = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload execution = 34 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-out = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . log creation = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:42:47] 2026-05-15 07:41:45,337 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/15/PanDA_Pilot-7139191209/pilotlog.txt
[2026-05-15 09:42:47] 2026-05-15 07:41:45,355 | WARNING  | 
[2026-05-15 09:42:47] [begin log extracts]
[2026-05-15 09:42:47] - Log from pilotlog.txt -
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | INFO     | extracted standard info from prmon json
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | INFO     | extracted standard memory fields from prmon json
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-15 09:42:47] 2026-05-15 07:41:45,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | WARNING  | found no stored workdir sizes
[2026-05-15 09:42:47] 2026-05-15 07:41:45,334 | INFO     | will not add max space = 0 B to job metrics
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | WARNING  | wrong length of table data, x=[1778830753.0], y=[14010.0] (must be same and length>=4)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | could have reported an average CPU frequency of 2249 MHz (4 samples)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . Timing measurements:
[2026-05-15 09:42:47] 2026-05-15 07:41:45,335 | INFO     | . get job = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . initial setup = 6 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload setup = 13 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-in = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . payload execution = 34 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . stage-out = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | . log creation = 0 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | ..............................
[2026-05-15 09:42:47] 2026-05-15 07:41:45,336 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-15 09:42:47] 2026-05-15 07:41:45,337 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/15/PanDA_Pilot-7139191209/pilotlog.txt
[2026-05-15 09:42:47] [end log extracts]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,356 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,356 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | 
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | job summary report
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | --------------------------------------------------
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | PanDA job id: 7139191209
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | task id: 50250192
[2026-05-15 09:42:47] 2026-05-15 07:41:45,455 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-15 07:39:37,633 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | pilot state: failed 
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | transexitcode: 65
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | exeerrorcode: 65
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | exitcode: 65
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | cpuconsumptiontime: 25 s
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | nevents: 0
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | neventsw: 0
[2026-05-15 09:42:47] 2026-05-15 07:41:45,456 | INFO     | pid: 5620
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | pgrp: 5620
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | corecount: 8
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | event service: False
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | sizes: {0: 2265638, 1: 2267523, 12: 2267523, 51: 2290963, 52: 2295259, 53: 2295287, 171: 2295581}
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | --------------------------------------------------
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | 
[2026-05-15 09:42:47] 2026-05-15 07:41:45,457 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-05-15 09:42:47] 2026-05-15 07:41:45,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-15 09:42:47] 2026-05-15 07:41:45,492 | INFO     | job 7139191209 has completed (purged errors)
[2026-05-15 09:42:47] 2026-05-15 07:41:45,492 | INFO     | overall cleanup function is called
[2026-05-15 09:42:47] 2026-05-15 07:41:46,498 | INFO     | --- collectZombieJob: --- 10, [5620]
[2026-05-15 09:42:47] 2026-05-15 07:41:46,499 | INFO     | zombie collector waiting for pid 5620
[2026-05-15 09:42:47] 2026-05-15 07:41:46,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-15 09:42:47] 2026-05-15 07:41:46,499 | INFO     | collected zombie processes
[2026-05-15 09:42:47] 2026-05-15 07:41:46,499 | INFO     | will attempt to kill all subprocesses of pid=5620
[2026-05-15 09:42:47] 2026-05-15 07:41:46,549 | INFO     | process IDs to be killed: [5620] (in reverse order)
[2026-05-15 09:42:47] 2026-05-15 07:41:46,597 | WARNING  | found no corresponding commands to process id(s)
[2026-05-15 09:42:47] 2026-05-15 07:41:46,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-15 09:42:47] 2026-05-15 07:41:46,599 | INFO     | did not find any defunct processes belonging to 5620
[2026-05-15 09:42:47] 2026-05-15 07:41:46,601 | INFO     | did not find any defunct processes belonging to 5620
[2026-05-15 09:42:47] 2026-05-15 07:41:46,601 | INFO     | Ready for new job
[2026-05-15 09:42:47] 2026-05-15 07:41:46,602 | INFO     | ***************************************
[2026-05-15 09:42:47] 2026-05-15 07:41:46,602 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-15 09:42:47] 2026-05-15 07:41:46,602 | INFO     | ***************************************
[2026-05-15 09:42:47] 2026-05-15 07:41:46,602 | INFO     | 
[2026-05-15 09:42:47] 2026-05-15 07:41:46,603 | INFO     | pilot is running in a VM
[2026-05-15 09:42:47] 2026-05-15 07:41:46,603 | INFO     | architecture information:
[2026-05-15 09:42:47] 2026-05-15 07:41:46,604 | INFO     | executing command: cat /etc/os-release
[2026-05-15 09:42:47] 2026-05-15 07:41:46,619 | INFO     | cat /etc/os-release:
[2026-05-15 09:42:47] NAME="CentOS Linux"
[2026-05-15 09:42:47] VERSION="7 (Core)"
[2026-05-15 09:42:47] ID="centos"
[2026-05-15 09:42:47] ID_LIKE="rhel fedora"
[2026-05-15 09:42:47] VERSION_ID="7"
[2026-05-15 09:42:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-15 09:42:47] ANSI_COLOR="0;31"
[2026-05-15 09:42:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-15 09:42:47] HOME_URL="https://www.centos.org/"
[2026-05-15 09:42:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-15 09:42:47] 
[2026-05-15 09:42:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-15 09:42:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-15 09:42:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-15 09:42:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-15 09:42:47] 
[2026-05-15 09:42:47] 2026-05-15 07:41:46,620 | INFO     | ***************************************
[2026-05-15 09:42:47] 2026-05-15 07:41:47,123 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-05-15 09:42:47] 2026-05-15 07:41:47,140 | INFO     | sufficient remaining disk space (498104008704 B)
[2026-05-15 09:42:47] 2026-05-15 07:41:47,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-15 09:42:47] 2026-05-15 07:41:47,140 | INFO     | current server update state: UPDATING_FINAL
[2026-05-15 09:42:47] 2026-05-15 07:41:47,140 | INFO     | update_server=False
[2026-05-15 09:42:47] 2026-05-15 07:41:47,141 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-15 09:42:47] 2026-05-15 07:41:47,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-15 09:42:47] 2026-05-15 07:41:47,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-15 09:42:47] 2026-05-15 07:41:47,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-15 09:42:47] 2026-05-15 07:41:47,402 | INFO     | all payload control threads have been joined
[2026-05-15 09:42:47] 2026-05-15 07:41:47,681 | INFO     | all data control threads have been joined
[2026-05-15 09:42:47] 2026-05-15 07:41:47,798 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-15 09:42:47] 2026-05-15 07:41:47,798 | INFO     | aborting loop
[2026-05-15 09:42:47] 2026-05-15 07:41:48,146 | INFO     | [job] retrieve thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,147 | INFO     | [job] queue monitor thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,319 | INFO     | all job control threads have been joined
[2026-05-15 09:42:47] 2026-05-15 07:41:48,408 | INFO     | [payload] control thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,687 | INFO     | [data] control thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,730 | INFO     | [job] validate thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:48,804 | INFO     | [job] job monitor thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,005 | INFO     | [job] create_data_payload thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,025 | INFO     | [payload] validate_post thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,142 | INFO     | [data] copytool_out thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,211 | INFO     | [payload] validate_pre thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,228 | INFO     | [payload] execute_payloads thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,325 | INFO     | [job] control thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,511 | INFO     | [data] copytool_in thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:49,604 | INFO     | [payload] failed_post thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:41:51,148 | INFO     | [data] queue_monitor thread has finished
[2026-05-15 09:42:47] 2026-05-15 07:42:17,501 | INFO     | PID=1144 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-15 09:42:47] 2026-05-15 07:42:17,501 | INFO     | .. there are 2 such processes running
[2026-05-15 09:42:47] 2026-05-15 07:42:17,501 | INFO     | found 0 job(s) in 20 queues
[2026-05-15 09:42:47] 2026-05-15 07:42:17,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-15 09:42:47] 2026-05-15 07:42:17,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-15 09:42:47] 2026-05-15 07:42:42,222 | INFO     | [monitor] cgroup control has ended
[2026-05-15 09:42:47] 2026-05-15 07:42:42,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193080117056)>', '<ExcThread(monitor, started 140192379803392)>']
[2026-05-15 09:42:47] 2026-05-15 07:42:42,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-15 09:42:47] 2026-05-15 07:42:42,618 | INFO     | [monitor] control thread has ended
[2026-05-15 09:42:47] 2026-05-15 07:42:47,361 | INFO     | all workflow threads have been joined
[2026-05-15 09:42:47] 2026-05-15 07:42:47,362 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-15 09:42:47] 2026-05-15 07:42:47,362 | INFO     | traces error code: 0
[2026-05-15 09:42:47] 2026-05-15 07:42:47,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-15 09:42:47] 2026-05-15 07:42:47,485 [wrapper] ==== pilot stdout END ====
[2026-05-15 09:42:47] 2026-05-15 07:42:47,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-15 09:42:47] 2026-05-15 07:42:47,499 [wrapper] pilotpid: 1144
[2026-05-15 09:42:47] 2026-05-15 07:42:47,503 [wrapper] Pilot exit status: 0
[2026-05-15 09:42:47] 2026-05-15 07:42:47,519 [wrapper] pandaids: 7139191209
[2026-05-15 09:42:47] 2026-05-15 07:42:47,552 [wrapper] cleanup supervisor_pilot  1150 1145
[2026-05-15 09:42:47] 2026-05-15 07:42:47,556 [wrapper] Test setup, not cleaning
[2026-05-15 09:42:47] 2026-05-15 07:42:47,559 [wrapper] apfmon messages muted
[2026-05-15 09:42:47] 2026-05-15 07:42:47,562 [wrapper] ==== wrapper stdout END ====
[2026-05-15 09:42:47] 2026-05-15 07:42:47,565 [wrapper] ==== wrapper stderr END ====
[2026-05-15 09:42:47]  *** Error codes and diagnostics ***
[2026-05-15 09:42:47]     "exeErrorCode": 65,
[2026-05-15 09:42:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 09:42:47]     "pilotErrorCode": 1305,
[2026-05-15 09:42:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-05-15 09:42:47]  *** Listing of results directory ***
[2026-05-15 09:42:47] total 104432
[2026-05-15 09:42:47] -rwx------. 1 boinc boinc     36281 May 14 22:18 runpilot2-wrapper.sh
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc      5631 May 15 04:08 queuedata.json
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc    683926 May 15 04:08 pilot3.tar.gz
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc       100 May 15 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-15 09:42:47] -rwxr-xr-x. 1 boinc boinc      7986 May 15 09:38 run_atlas
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc       105 May 15 09:38 job.xml
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc 102643751 May 15 09:38 EVNT.50238157._000157.pool.root.1
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc    697444 May 15 09:38 input.tar.gz
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc      6308 May 15 09:38 init_data.xml
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc     15667 May 15 09:38 start_atlas.sh
[2026-05-15 09:42:47] drwxrwx--x. 2 boinc boinc        68 May 15 09:38 shared
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc         0 May 15 09:38 boinc_lockfile
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc      2556 May 15 09:38 pandaJob.out
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc    993491 May 15 09:38 agis_schedconf.cvmfs.json
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc   1502367 May 15 09:38 agis_ddmendpoints.agis.ALL.json
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc       415 May 15 09:38 workernode_map.json
[2026-05-15 09:42:47] drwx------. 5 boinc boinc      4096 May 15 09:38 pilot3
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc       481 May 15 09:39 boinc_task_state.xml
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc       954 May 15 09:39 memory_monitor_summary.json
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc     20412 May 15 09:39 log.50250192._025826.job.log.tgz.1
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc        95 May 15 09:41 pilot_heartbeat.json
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc      7021 May 15 09:41 heartbeat_new.json
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc      6983 May 15 09:41 heartbeat.json
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc      8192 May 15 09:42 boinc_mmap_file
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc        23 May 15 09:42 wrapper_checkpoint.txt
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc      4883 May 15 09:42 pilotlog.txt
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc     75392 May 15 09:42 log.50250192._025826.job.log.1
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc       188 May 15 09:42 output.list
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc       410 May 15 09:42 runtime_log
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc    112640 May 15 09:42 result.tar.gz
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc      8301 May 15 09:42 runtime_log.err
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc       637 May 15 09:42 2e174f20ff31.diag
[2026-05-15 09:42:47] -rw-r--r--. 1 boinc boinc     21289 May 15 09:42 stderr.txt
[2026-05-15 09:42:47] No HITS result produced
[2026-05-15 09:42:47]  *** Contents of shared directory: ***
[2026-05-15 09:42:47] total 101052
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc 102643751 May 15 09:38 ATLAS.root_0
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc    697444 May 15 09:38 input.tar.gz
[2026-05-15 09:42:47] -rw-r--r--. 2 boinc boinc     15667 May 15 09:38 start_atlas.sh
[2026-05-15 09:42:47] -rw-------. 1 boinc boinc    112640 May 15 09:42 result.tar.gz
09:42:49 (29788): run_atlas exited; CPU time 25.575061
09:42:49 (29788): called boinc_finish(0)

</stderr_txt>
]]>

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